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Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= epV30487
         (516 letters)

Database: arabidopsis 
           28,952 sequences; 12,070,560 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

At2g41740.1 68415.m05159 villin 2 (VLN2) nearly identical to vil...   166   9e-42
At3g57410.1 68416.m06391 villin 3 (VLN3) nearly identical to vil...   162   1e-40
At5g57320.1 68418.m07160 villin, putative similar to villin 2 (V...   161   3e-40
At4g30160.1 68417.m04289 villin, putative similar to  villin 2 (...   157   5e-39
At2g29890.1 68415.m03630 villin 1 (VLN1) nearly identical to vil...    94   6e-20
At1g09390.1 68414.m01050 GDSL-motif lipase/hydrolase family prot...    29   1.9  
At1g04470.1 68414.m00438 expressed protein EST gb|ATTS5672 comes...    29   1.9  
At2g33420.1 68415.m04096 expressed protein                             29   2.5  
At5g45610.1 68418.m05605 expressed protein                             28   3.2  
At1g68750.1 68414.m07859 phosphoenolpyruvate carboxylase family ...    28   3.2  
At1g56670.1 68414.m06517 GDSL-motif lipase/hydrolase family prot...    28   3.2  
At5g10520.1 68418.m01218 protein kinase family protein contains ...    28   4.3  
At5g29613.1 68418.m03639 hypothetical protein                          27   5.7  
At3g23270.1 68416.m02933 regulator of chromosome condensation (R...    27   5.7  
At5g49430.1 68418.m06116 transducin family protein / WD-40 repea...    27   7.5  
At1g13770.1 68414.m01616 expressed protein contains Pfam domain,...    27   7.5  
At3g53320.1 68416.m05883 expressed protein                             27   9.9  
At3g02750.1 68416.m00267 protein phosphatase 2C family protein /...    27   9.9  

>At2g41740.1 68415.m05159 villin 2 (VLN2) nearly identical to villin
           2 (VLN2) [Arabidopsis thaliana] GI:3415115
          Length = 976

 Score =  166 bits (403), Expect = 9e-42
 Identities = 87/147 (59%), Positives = 102/147 (69%), Gaps = 1/147 (0%)
 Frame = +1

Query: 67  AFADAGRKPGLEIWRIENFEPVAVPKTQFGLFYSGDSYIVLNTTGDK-DRLTWDIHFWLG 243
           AF  AG+KPG EIWRIENFE V VPK++ G FY GD+YIVL TT +K     +DIHFW+G
Sbjct: 9   AFQGAGQKPGTEIWRIENFEAVPVPKSEHGKFYMGDTYIVLQTTQNKGGAYLFDIHFWIG 68

Query: 244 SRTSQDEAGAAAILTVNLDDEQFQGSAVQHREVQYYESKEFLEYFSPAIRYLKGGHASGF 423
             TSQDEAG AA+ TV L D    G AVQHRE+Q +ES +FL YF P I  L+GG ASGF
Sbjct: 69  KDTSQDEAGTAAVKTVEL-DAVLGGRAVQHREIQGHESDKFLSYFKPCIIPLEGGVASGF 127

Query: 424 SHVTINEGTEKRLFQIKGKRNVRVKQV 504
             V   E  E RL+  KGKR +R+KQV
Sbjct: 128 KTVE-EEVFETRLYTCKGKRAIRLKQV 153



 Score = 57.2 bits (132), Expect = 6e-09
 Identities = 37/122 (30%), Positives = 59/122 (48%), Gaps = 2/122 (1%)
 Frame = +1

Query: 97  LEIWRIENFEPVAVPKTQFGLFYSGDSYIVLNTTGDKDRL-TWDIHFWLGSRTSQDEAGA 273
           LE+W +       +PK   G  YSGD Y+VL T    +R   + +  W G ++  ++   
Sbjct: 392 LEVWYVNGKVKTPLPKEDIGKLYSGDCYLVLYTYHSGERKDEYFLSCWFGKKSIPEDQD- 450

Query: 274 AAILTVNLDDEQFQGSAVQHREVQYYESKEFLEYFSPAIRYLKGGHASGF-SHVTINEGT 450
            AI   N      +G  VQ R  +  E  +F+  F P +  LKGG +SG+ S +  +E T
Sbjct: 451 TAIRLANTMSNSLKGRPVQGRIYEGKEPPQFVALFQPMV-VLKGGLSSGYKSSMGESEST 509

Query: 451 EK 456
           ++
Sbjct: 510 DE 511


>At3g57410.1 68416.m06391 villin 3 (VLN3) nearly identical to villin
           3 (VLN3) [Arabidopsis thaliana] GI:3415117
          Length = 965

 Score =  162 bits (394), Expect = 1e-40
 Identities = 85/147 (57%), Positives = 100/147 (68%), Gaps = 1/147 (0%)
 Frame = +1

Query: 67  AFADAGRKPGLEIWRIENFEPVAVPKTQFGLFYSGDSYIVLNTTGDK-DRLTWDIHFWLG 243
           AF   G+KPG EIWRIENFEPV VPK++ G FY GD+YIVL TT +K     +DIHFW+G
Sbjct: 11  AFQGVGQKPGTEIWRIENFEPVPVPKSEHGKFYMGDTYIVLQTTQNKGGAYLFDIHFWIG 70

Query: 244 SRTSQDEAGAAAILTVNLDDEQFQGSAVQHREVQYYESKEFLEYFSPAIRYLKGGHASGF 423
             TSQDEAG AA+ TV L D    G AVQ+RE+Q +ES +FL YF P I  L+GG ASGF
Sbjct: 71  KDTSQDEAGTAAVKTVEL-DAALGGRAVQYREIQGHESDKFLSYFKPCIIPLEGGVASGF 129

Query: 424 SHVTINEGTEKRLFQIKGKRNVRVKQV 504
                 E  E RL+  KGKR V +KQV
Sbjct: 130 KKPE-EEEFETRLYTCKGKRAVHLKQV 155



 Score = 53.6 bits (123), Expect = 8e-08
 Identities = 34/119 (28%), Positives = 57/119 (47%), Gaps = 1/119 (0%)
 Frame = +1

Query: 97  LEIWRIENFEPVAVPKTQFGLFYSGDSYIVLNTTGDKDRL-TWDIHFWLGSRTSQDEAGA 273
           LE+W I+      + K   G  YSGD Y+VL T    +R   + +  W G  ++Q++   
Sbjct: 394 LEVWYIDANSKTVLSKDHVGKLYSGDCYLVLYTYHSGERKEDYFLCCWFGKNSNQEDQET 453

Query: 274 AAILTVNLDDEQFQGSAVQHREVQYYESKEFLEYFSPAIRYLKGGHASGFSHVTINEGT 450
           A  L   + +   +G  VQ R  +  E  +F+  F   +  LKGG +SG+ +    +G+
Sbjct: 454 AVRLASTMTN-SLKGRPVQARIFEGKEPPQFVALFQHMV-VLKGGLSSGYKNSMTEKGS 510


>At5g57320.1 68418.m07160 villin, putative similar to villin 2
           (VLN2) [Arabidopsis thaliana] GI:3415115, villin 3
           (VLN3) [Arabidopsis thaliana] GI:3415117; contains Pfam
           profiles PF00626: Gelsolin repeat, PF02209: Villin
           headpiece domain
          Length = 962

 Score =  161 bits (390), Expect = 3e-40
 Identities = 83/153 (54%), Positives = 106/153 (69%), Gaps = 1/153 (0%)
 Frame = +1

Query: 49  MPEVHQAFADAGRKPGLEIWRIENFEPVAVPKTQFGLFYSGDSYIVLNTTGDKD-RLTWD 225
           M ++ QA   AG+K G+EIWRIENF+PV VP+   G F++GDSYIVL TT  +   L  D
Sbjct: 5   MRDLDQALQGAGQKSGIEIWRIENFKPVTVPQESHGKFFTGDSYIVLKTTASRSGSLHHD 64

Query: 226 IHFWLGSRTSQDEAGAAAILTVNLDDEQFQGSAVQHREVQYYESKEFLEYFSPAIRYLKG 405
           IH+WLG  +SQDEAGA A++TV L D    G AVQ+REVQ +E+++FL YF P I   +G
Sbjct: 65  IHYWLGKDSSQDEAGAVAVMTVEL-DSALGGRAVQYREVQGHETEKFLSYFKPCIIPQEG 123

Query: 406 GHASGFSHVTINEGTEKRLFQIKGKRNVRVKQV 504
           G ASGF+HV   E  + RL+  KGK  VRVK+V
Sbjct: 124 GVASGFNHVKPEE-HQTRLYICKGKHVVRVKEV 155



 Score = 44.8 bits (101), Expect = 3e-05
 Identities = 36/138 (26%), Positives = 57/138 (41%)
 Frame = +1

Query: 97  LEIWRIENFEPVAVPKTQFGLFYSGDSYIVLNTTGDKDRLTWDIHFWLGSRTSQDEAGAA 276
           L++WRI   E + +   +   FYSGD YI+  +   +DR    +  W G + S +E  A+
Sbjct: 396 LQVWRINCEEKILLEAAEQSKFYSGDCYILQYSYPGEDREEHLVGTWFG-KQSVEEDRAS 454

Query: 277 AILTVNLDDEQFQGSAVQHREVQYYESKEFLEYFSPAIRYLKGGHASGFSHVTINEGTEK 456
           AI   N   E  +    Q R  +  E  +F       I + KGG +  F           
Sbjct: 455 AISLANKMVESMKFVPAQARINEGKEPIQFFVIMQSFITF-KGGVSDAFKKYIAENDIPD 513

Query: 457 RLFQIKGKRNVRVKQVKP 510
             ++ +G    RV+   P
Sbjct: 514 TTYEAEGVALFRVQGSGP 531


>At4g30160.1 68417.m04289 villin, putative similar to  villin 2
           (VLN2) [Arabidopsis thaliana] GI:3415115, villin 3
           (VLN3) [Arabidopsis thaliana] GI:3415117; contains Pfam
           profiles PF00626: Gelsolin repeat, PF02209: Villin
           headpiece domain
          Length = 974

 Score =  157 bits (380), Expect = 5e-39
 Identities = 83/153 (54%), Positives = 101/153 (66%), Gaps = 1/153 (0%)
 Frame = +1

Query: 49  MPEVHQAFADAGRKPGLEIWRIENFEPVAVPKTQFGLFYSGDSYIVLNTTGDK-DRLTWD 225
           M ++  AF  AG+K G+EIWRIENF P  +PK+  G F++GDSYIVL TT  K   L  D
Sbjct: 5   MRDLDPAFQGAGQKAGIEIWRIENFIPTPIPKSSIGKFFTGDSYIVLKTTALKTGALRHD 64

Query: 226 IHFWLGSRTSQDEAGAAAILTVNLDDEQFQGSAVQHREVQYYESKEFLEYFSPAIRYLKG 405
           IH+WLG  TSQDEAG AA+ TV L D    G AVQ+REVQ +E+++FL YF P I   +G
Sbjct: 65  IHYWLGKDTSQDEAGTAAVKTVEL-DAALGGRAVQYREVQGHETEKFLSYFKPCIIPQEG 123

Query: 406 GHASGFSHVTINEGTEKRLFQIKGKRNVRVKQV 504
           G ASGF HV   E    RLF  +GK  V VK+V
Sbjct: 124 GVASGFKHVVAEEHI-TRLFVCRGKHVVHVKEV 155



 Score = 46.4 bits (105), Expect = 1e-05
 Identities = 33/154 (21%), Positives = 64/154 (41%), Gaps = 2/154 (1%)
 Frame = +1

Query: 55  EVHQAFADAGRKPGLEIWRIENFEPVAVPKTQFGLFYSGDSYIVLNTTGDKDRLTWDIHF 234
           E  Q F D      L++WR+       +       FYSGD Y+   +   +++    I  
Sbjct: 382 EEPQVFIDC--TGNLQVWRVNGQAKTLLQAADHSKFYSGDCYVFQYSYPGEEKEEVLIGT 439

Query: 235 WLGSRTSQDEAGAAAILTVNLDDEQFQGSAVQHREVQYYESKEFLEYF--SPAIRYLKGG 408
           W G ++ ++E G+A    V++  +  +       + + YE KE +++F    +    KGG
Sbjct: 440 WFGKQSVEEERGSA----VSMASKMVESMKFVPAQARIYEGKEPIQFFVIMQSFIVFKGG 495

Query: 409 HASGFSHVTINEGTEKRLFQIKGKRNVRVKQVKP 510
            +SG+      +  +   +   G    R++   P
Sbjct: 496 ISSGYKKYIAEKEVDDDTYNENGVALFRIQGSGP 529


>At2g29890.1 68415.m03630 villin 1 (VLN1) nearly identical to villin
           1 (VLN1) [Arabidopsis thaliana] GI:3415113
          Length = 909

 Score = 93.9 bits (223), Expect = 6e-20
 Identities = 54/151 (35%), Positives = 87/151 (57%), Gaps = 1/151 (0%)
 Frame = +1

Query: 55  EVHQAFADAGRKPGLEIWRIENFEPVAVPKTQFGLFYSGDSYIVLNTTGDK-DRLTWDIH 231
           ++  AF   G K GLEIW + N + +++PK+ FG F+SG++Y+VL T   K +   +DIH
Sbjct: 7   DIDSAFQGVGTKSGLEIWCVYNKQLISIPKSSFGKFHSGNAYLVLRTFLRKIESPQYDIH 66

Query: 232 FWLGSRTSQDEAGAAAILTVNLDDEQFQGSAVQHREVQYYESKEFLEYFSPAIRYLKGGH 411
           +WLG   ++ ++  A+   ++L D       VQ+REVQ  E+++FL YF P I  ++G +
Sbjct: 67  YWLGIDANEVDSILASDKALDL-DAALGCCTVQYREVQGQETEKFLSYFKPCIIPVEGKY 125

Query: 412 ASGFSHVTINEGTEKRLFQIKGKRNVRVKQV 504
           +         E  +  L + KG   VRVK+V
Sbjct: 126 SPKTG--IAGETYQVTLLRCKGDHVVRVKEV 154



 Score = 32.3 bits (70), Expect = 0.20
 Identities = 24/107 (22%), Positives = 45/107 (42%)
 Frame = +1

Query: 88  KPGLEIWRIENFEPVAVPKTQFGLFYSGDSYIVLNTTGDKDRLTWDIHFWLGSRTSQDEA 267
           +  L++WR++  +   +        ++GD Y+V      K+R    ++ W+G  + Q + 
Sbjct: 388 RDNLKVWRVDGDDVSLLSIPDQTKLFTGDCYLVQYKYTYKERTEHLLYVWIGCESIQQDR 447

Query: 268 GAAAILTVNLDDEQFQGSAVQHREVQYYESKEFLEYFSPAIRYLKGG 408
            A AI   +      +G +V     Q  E   F   F   + + KGG
Sbjct: 448 -ADAITNASAIVGTTKGESVLCHIYQGNEPSRFFPMFQSLVVF-KGG 492


>At1g09390.1 68414.m01050 GDSL-motif lipase/hydrolase family protein
           Similar to early nodulin ENOD8 [Medicago sativa]
           GI:304037, lanatoside 15'-O-acetylesterase [Digitalis
           lanata] GI:3688284, elicitor-induced glycoprotein iEP4
           [Daucus carota] GI:1911765; contains InterPro Entry
           IPR001087 Lipolytic enzyme, G-D-S-L family
          Length = 370

 Score = 29.1 bits (62), Expect = 1.9
 Identities = 13/42 (30%), Positives = 22/42 (52%)
 Frame = -1

Query: 141 RNGDRFEVLNPPYFETRLPAGIRECLVYFRHFRSRALSLTTL 16
           +NG  F ++        +P  +   L+ F HF+SRAL L ++
Sbjct: 107 QNGANFAIVGSSTLPRYVPFALNIQLMQFLHFKSRALELASI 148


>At1g04470.1 68414.m00438 expressed protein EST gb|ATTS5672 comes
           from this gene
          Length = 1035

 Score = 29.1 bits (62), Expect = 1.9
 Identities = 25/86 (29%), Positives = 38/86 (44%)
 Frame = +2

Query: 89  SRVSKYGGLRTSNRSPFRRLSSVSSTPGTPTLY*TPQAIRTV*HGTSISGSARGPARTKP 268
           SRV +  GL+   RSP RR+S+V +  G  +   +P    ++  G+       G     P
Sbjct: 107 SRVKRALGLKMLKRSPSRRMSTVGTVVGAVSAPSSPGNNGSIGSGSGHFSPGAGFFTVPP 166

Query: 269 ARRPSSR*TWTTNNSRDQRYSTERSN 346
           AR    R   +    R Q   TE+S+
Sbjct: 167 AR--PRRPLTSAEIMRQQMKVTEQSD 190


>At2g33420.1 68415.m04096 expressed protein
          Length = 1039

 Score = 28.7 bits (61), Expect = 2.5
 Identities = 13/31 (41%), Positives = 19/31 (61%)
 Frame = +2

Query: 89  SRVSKYGGLRTSNRSPFRRLSSVSSTPGTPT 181
           SRV +  GL+   RSP RR+S++ +  G  T
Sbjct: 113 SRVKRALGLKMLKRSPSRRMSTIGAAGGAAT 143


>At5g45610.1 68418.m05605 expressed protein
          Length = 633

 Score = 28.3 bits (60), Expect = 3.2
 Identities = 11/28 (39%), Positives = 16/28 (57%)
 Frame = -1

Query: 165 VEETELSLRNGDRFEVLNPPYFETRLPA 82
           ++  E +L+  D +  L PPY  T LPA
Sbjct: 16  IDSIETTLKKADMYRPLPPPYLPTFLPA 43


>At1g68750.1 68414.m07859 phosphoenolpyruvate carboxylase family
           protein / PEP carboxylase family protein similar to
           SP|P51059 Phosphoenolpyruvate carboxylase 2 (EC
           4.1.1.31) (PEPCASE) {Zea mays}; contains Pfam profile
           PF00311: phosphoenolpyruvate carboxylase
          Length = 1032

 Score = 28.3 bits (60), Expect = 3.2
 Identities = 12/28 (42%), Positives = 15/28 (53%)
 Frame = +1

Query: 304 EQFQGSAVQHREVQYYESKEFLEYFSPA 387
           E+  G + QH     YE+ EFL YF  A
Sbjct: 812 EEISGISCQHYRSTVYENPEFLSYFHEA 839


>At1g56670.1 68414.m06517 GDSL-motif lipase/hydrolase family protein
           similarity to early early nodulin ENOD8 [Medicago
           sativa] GI:304037, lanatoside 15'-O-acetylesterase
           [Digitalis lanata] GI:3688284, elicitor-induced
           glycoprotein iEP4 [Daucus carota] GI:1911765; contains
           InterPro Entry IPR001087 Lipolytic enzyme, G-D-S-L
           family
          Length = 373

 Score = 28.3 bits (60), Expect = 3.2
 Identities = 12/41 (29%), Positives = 20/41 (48%)
 Frame = -1

Query: 141 RNGDRFEVLNPPYFETRLPAGIRECLVYFRHFRSRALSLTT 19
           +NG  F +   P     +P  +   +  F HF+SR+L L +
Sbjct: 110 QNGANFAIAGSPTLPKNVPFSLNIQVKQFSHFKSRSLELAS 150


>At5g10520.1 68418.m01218 protein kinase family protein contains
           protein kinase domain, INTERPRO:IPR000719
          Length = 467

 Score = 27.9 bits (59), Expect = 4.3
 Identities = 15/39 (38%), Positives = 18/39 (46%)
 Frame = +1

Query: 334 REVQYYESKEFLEYFSPAIRYLKGGHASGFSHVTINEGT 450
           R   Y E     +YF+P     KGGHA  +  V IN  T
Sbjct: 139 RNFTYEELAVATDYFNPENMIGKGGHAEVYKGVLINGET 177


>At5g29613.1 68418.m03639 hypothetical protein
          Length = 117

 Score = 27.5 bits (58), Expect = 5.7
 Identities = 16/63 (25%), Positives = 29/63 (46%)
 Frame = +1

Query: 295 LDDEQFQGSAVQHREVQYYESKEFLEYFSPAIRYLKGGHASGFSHVTINEGTEKRLFQIK 474
           LD  Q Q     H   + ++ + F E F       +   A+G + + + +GT+ R  +I 
Sbjct: 21  LDGIQTQNGLQHHMSYKKFKDETF-EEFDDLKMVFEDNIATGGNAIGLGDGTDARTCEIA 79

Query: 475 GKR 483
           GK+
Sbjct: 80  GKK 82


>At3g23270.1 68416.m02933 regulator of chromosome condensation
           (RCC1) family protein contains Pfam domain PF00415:
           Regulator of chromosome condensation (RCC1); similar to
           zinc finger protein (GI:15811367) [Arabidopsis
           thaliana]; similar to chromosome condensation regulator
           protein (GI:22770461) [Cicer arietinum]
          Length = 1045

 Score = 27.5 bits (58), Expect = 5.7
 Identities = 11/22 (50%), Positives = 16/22 (72%)
 Frame = -2

Query: 131 TGSKFSILHISRPGFLPASANA 66
           + +K S++  SRPGF P S+NA
Sbjct: 701 SANKNSVMSSSRPGFTPESSNA 722


>At5g49430.1 68418.m06116 transducin family protein / WD-40 repeat
           family protein similar to WD-repeat protein 9
           (SP:Q9NSI6) {Homo sapiens}; contains Pfam PF00400: WD
           domain, G-beta repeat (4 copies)
          Length = 1677

 Score = 27.1 bits (57), Expect = 7.5
 Identities = 13/33 (39%), Positives = 18/33 (54%), Gaps = 1/33 (3%)
 Frame = -2

Query: 140 GTATGSKFSILHISRPGFLPASANAW-CTSGIL 45
           G A GSKFS+   S+   +P   N+W C   I+
Sbjct: 457 GCAAGSKFSVTDYSKDENVPKFKNSWFCHDNIV 489


>At1g13770.1 68414.m01616 expressed protein contains Pfam domain,
           PF04884: Protein of unknown function, DUF647; contains
           non-consensus (GC) splice site at intron 2
          Length = 440

 Score = 27.1 bits (57), Expect = 7.5
 Identities = 18/46 (39%), Positives = 23/46 (50%), Gaps = 1/46 (2%)
 Frame = -2

Query: 326 TADPWNCSSSKFTVRMAAAPASSWLVLEPSQKWMSHV-RRSLSPVV 192
           T + WN SSS    + A   ASS L ++ S    +HV RR L   V
Sbjct: 13  TLEEWNGSSSTKLFKTATITASSSLSIQRSANRFNHVWRRVLQAFV 58


>At3g53320.1 68416.m05883 expressed protein
          Length = 553

 Score = 26.6 bits (56), Expect = 9.9
 Identities = 15/48 (31%), Positives = 28/48 (58%)
 Frame = +2

Query: 218 HGTSISGSARGPARTKPARRPSSR*TWTTNNSRDQRYSTERSNITSPR 361
           HG+S S S +   +T+PAR P      +TN+    + S++  +++SP+
Sbjct: 494 HGSSSSASKKSGGKTQPARSPIQE---STNSK--SKASSKVVSVSSPK 536


>At3g02750.1 68416.m00267 protein phosphatase 2C family protein /
           PP2C family protein similar to protein phosphatase-2C;
           PP2C (GI:3643088) [Mesembryanthemum crystallinum];
           contains Pfam PF00481 : Protein phosphatase 2C domain;
          Length = 492

 Score = 26.6 bits (56), Expect = 9.9
 Identities = 24/84 (28%), Positives = 38/84 (45%), Gaps = 7/84 (8%)
 Frame = +1

Query: 52  PEVHQAFADAGRKPGLEIWR------IENFEPVAVPKTQFGLFYSGDSYIVLNTTGDKDR 213
           PEV + +      PGL + R      +++F  ++VP   F      D +IVL T G  D 
Sbjct: 284 PEVCRVWLPNCDSPGLAMARAFGDFCLKDFGLISVPDVSFRQLTEKDEFIVLATDGIWDV 343

Query: 214 LT-WDIHFWLGSRTSQDEAGAAAI 282
           L+  D+   + S  S+  A  A +
Sbjct: 344 LSNEDVVAIVASAPSRSSAARALV 367


  Database: arabidopsis
    Posted date:  Oct 4, 2007 10:56 AM
  Number of letters in database: 12,070,560
  Number of sequences in database:  28,952
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 11,580,881
Number of Sequences: 28952
Number of extensions: 241771
Number of successful extensions: 758
Number of sequences better than 10.0: 18
Number of HSP's better than 10.0 without gapping: 724
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 744
length of database: 12,070,560
effective HSP length: 76
effective length of database: 9,870,208
effective search space used: 937669760
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)

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