Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= epV30486
         (516 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY316682-1|AAQ83696.1|  456|Tribolium castaneum Sp-like zinc fin...    24   0.70 
AY600514-1|AAT11862.1|  242|Tribolium castaneum iroquois-like pr...    23   2.1  
S73225-1|AAB30811.1|  327|Tribolium castaneum protein ( Triboliu...    21   6.5  
EF222292-1|ABN79652.1|  354|Tribolium castaneum cardioactive pep...    21   6.5  
AY584475-1|AAS93634.1|  209|Tribolium castaneum homothorax protein.    21   6.5  
AJ518941-1|CAD57735.1|  456|Tribolium castaneum homothorax protein.    21   6.5  
AJ005083-1|CAB65469.1|  585|Tribolium castaneum signal receptor ...    21   6.5  
AY873914-1|AAW67570.1|  384|Tribolium castaneum chitinase 3 prot...    21   8.6  
AF227923-1|AAF36721.1|  351|Tribolium castaneum abdominal-B prot...    21   8.6  

>AY316682-1|AAQ83696.1|  456|Tribolium castaneum Sp-like zinc finger
           protein protein.
          Length = 456

 Score = 24.2 bits (50), Expect = 0.70
 Identities = 10/26 (38%), Positives = 14/26 (53%)
 Frame = -3

Query: 253 SPRPSVATGLAPSTGKRPRSRRTWTG 176
           +P P+   G  P     PRS+R +TG
Sbjct: 262 APSPTAGAGGLPPQVPSPRSQRRYTG 287


>AY600514-1|AAT11862.1|  242|Tribolium castaneum iroquois-like
           protein protein.
          Length = 242

 Score = 22.6 bits (46), Expect = 2.1
 Identities = 20/76 (26%), Positives = 25/76 (32%)
 Frame = -2

Query: 275 PTLRSVPLAATLRRYGPGTLYGKTAPFKTNLDRSRRDEKAEPPEHHISRYRLKQRDSVLG 96
           PT    P    L  YG G  Y   A  K     S    KA   EH  + Y  K    +L 
Sbjct: 62  PTTGYYPYDPALAAYGYGAGYDLAARRKNATRESTATLKAWLNEHKKNPYPTKGEKIMLA 121

Query: 95  YIPVRSPLLRKSWLVS 48
            I   +     +W  +
Sbjct: 122 IITKMTLTQVSTWFAN 137


>S73225-1|AAB30811.1|  327|Tribolium castaneum protein ( Tribolium
           castaneum homeodomainprotein mRNA, complete cds. ).
          Length = 327

 Score = 21.0 bits (42), Expect = 6.5
 Identities = 7/11 (63%), Positives = 10/11 (90%)
 Frame = -3

Query: 220 PSTGKRPRSRR 188
           PS+G+ PR+RR
Sbjct: 203 PSSGRSPRTRR 213


>EF222292-1|ABN79652.1|  354|Tribolium castaneum cardioactive
           peptide receptor 2 protein.
          Length = 354

 Score = 21.0 bits (42), Expect = 6.5
 Identities = 9/22 (40%), Positives = 14/22 (63%)
 Frame = -1

Query: 414 RFHVLLNSLFKVLFNFPSRYLF 349
           R  V+L  L  +LF+ P+ +LF
Sbjct: 162 RVLVMLAWLLSILFSLPTVFLF 183


>AY584475-1|AAS93634.1|  209|Tribolium castaneum homothorax protein.
          Length = 209

 Score = 21.0 bits (42), Expect = 6.5
 Identities = 10/33 (30%), Positives = 15/33 (45%)
 Frame = -1

Query: 306 PPA*GCTLKQPDSKERPSRRDPPSLRAWHPLRE 208
           P   G   + P S++     DP ++  W P RE
Sbjct: 92  PGTPGPLSQAPASQQSLDASDPDAMGKWCPRRE 124


>AJ518941-1|CAD57735.1|  456|Tribolium castaneum homothorax protein.
          Length = 456

 Score = 21.0 bits (42), Expect = 6.5
 Identities = 10/33 (30%), Positives = 15/33 (45%)
 Frame = -1

Query: 306 PPA*GCTLKQPDSKERPSRRDPPSLRAWHPLRE 208
           P   G   + P S++     DP ++  W P RE
Sbjct: 248 PGTPGPLSQAPASQQSLDASDPDAMGKWCPRRE 280


>AJ005083-1|CAB65469.1|  585|Tribolium castaneum signal receptor
           protein protein.
          Length = 585

 Score = 21.0 bits (42), Expect = 6.5
 Identities = 10/30 (33%), Positives = 15/30 (50%)
 Frame = +3

Query: 420 G*TCETRMNERRDSSFSLGRTFTCVQMLTE 509
           G  CE  +NE   +  S   T  CVQ++ +
Sbjct: 292 GPRCEGDINECLSNPCSNAGTLDCVQLVND 321


>AY873914-1|AAW67570.1|  384|Tribolium castaneum chitinase 3
           protein.
          Length = 384

 Score = 20.6 bits (41), Expect = 8.6
 Identities = 10/20 (50%), Positives = 12/20 (60%)
 Frame = +1

Query: 274 GLLESAALSGW*TPSKAKYD 333
           GL+ SAA+SG     K  YD
Sbjct: 174 GLILSAAVSGGIASCKLSYD 193


>AF227923-1|AAF36721.1|  351|Tribolium castaneum abdominal-B
           protein.
          Length = 351

 Score = 20.6 bits (41), Expect = 8.6
 Identities = 7/13 (53%), Positives = 8/13 (61%)
 Frame = -3

Query: 184 WTGVVATRKRNLP 146
           WTG V  RK+  P
Sbjct: 237 WTGQVTVRKKRKP 249


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 105,116
Number of Sequences: 336
Number of extensions: 2172
Number of successful extensions: 9
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 9
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 9
length of database: 122,585
effective HSP length: 53
effective length of database: 104,777
effective search space used: 12363686
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)