Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= epV30486
(516 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BC146790-1|AAI46791.1| 1460|Homo sapiens centrosomal protein 170... 29 7.3
BC078155-1|AAH78155.1| 417|Homo sapiens CEP170 protein protein. 29 7.3
BC014590-1|AAH14590.2| 293|Homo sapiens CEP170L protein protein. 29 7.3
AL606534-4|CAI12944.1| 1584|Homo sapiens centrosomal protein 170... 29 7.3
AL606534-3|CAI12943.1| 1486|Homo sapiens centrosomal protein 170... 29 7.3
AL606534-2|CAI12945.1| 1460|Homo sapiens centrosomal protein 170... 29 7.3
AL606534-1|CAI12942.1| 1557|Homo sapiens centrosomal protein 170... 29 7.3
AB022659-1|BAA83380.1| 1460|Homo sapiens KARP-1-binding protein ... 29 7.3
AB022658-1|BAA83379.1| 1486|Homo sapiens KARP-1-binding protein ... 29 7.3
AB022657-1|BAA83378.1| 1584|Homo sapiens KARP-1-binding protein ... 29 7.3
AB007939-1|BAA32315.2| 1472|Homo sapiens KIAA0470 protein protein. 29 7.3
>BC146790-1|AAI46791.1| 1460|Homo sapiens centrosomal protein 170kDa
protein.
Length = 1460
Score = 29.5 bits (63), Expect = 7.3
Identities = 16/45 (35%), Positives = 22/45 (48%), Gaps = 1/45 (2%)
Frame = -2
Query: 227 PGTLYGKTAPFKTNLDRSRRDEKAEPPEH-HISRYRLKQRDSVLG 96
P ++ KT R + AEPP+H I+R R RD V+G
Sbjct: 1245 PPLVHSKTPEGNNGRSGDPRPQAAEPPDHLTITRRRTWSRDEVMG 1289
>BC078155-1|AAH78155.1| 417|Homo sapiens CEP170 protein protein.
Length = 417
Score = 29.5 bits (63), Expect = 7.3
Identities = 16/45 (35%), Positives = 22/45 (48%), Gaps = 1/45 (2%)
Frame = -2
Query: 227 PGTLYGKTAPFKTNLDRSRRDEKAEPPEH-HISRYRLKQRDSVLG 96
P ++ KT R + AEPP+H I+R R RD V+G
Sbjct: 253 PPLVHSKTPEGNNGRSGDPRPQAAEPPDHLTITRRRTWSRDEVMG 297
>BC014590-1|AAH14590.2| 293|Homo sapiens CEP170L protein protein.
Length = 293
Score = 29.5 bits (63), Expect = 7.3
Identities = 16/45 (35%), Positives = 22/45 (48%), Gaps = 1/45 (2%)
Frame = -2
Query: 227 PGTLYGKTAPFKTNLDRSRRDEKAEPPEH-HISRYRLKQRDSVLG 96
P ++ KT R + AEPP+H I+R R RD V+G
Sbjct: 78 PPLVHSKTPEGNNGRSGDPRPQAAEPPDHLTITRRRTWSRDEVMG 122
>AL606534-4|CAI12944.1| 1584|Homo sapiens centrosomal protein 170kDa
protein.
Length = 1584
Score = 29.5 bits (63), Expect = 7.3
Identities = 16/45 (35%), Positives = 22/45 (48%), Gaps = 1/45 (2%)
Frame = -2
Query: 227 PGTLYGKTAPFKTNLDRSRRDEKAEPPEH-HISRYRLKQRDSVLG 96
P ++ KT R + AEPP+H I+R R RD V+G
Sbjct: 1369 PPLVHSKTPEGNNGRSGDPRPQAAEPPDHLTITRRRTWSRDEVMG 1413
>AL606534-3|CAI12943.1| 1486|Homo sapiens centrosomal protein 170kDa
protein.
Length = 1486
Score = 29.5 bits (63), Expect = 7.3
Identities = 16/45 (35%), Positives = 22/45 (48%), Gaps = 1/45 (2%)
Frame = -2
Query: 227 PGTLYGKTAPFKTNLDRSRRDEKAEPPEH-HISRYRLKQRDSVLG 96
P ++ KT R + AEPP+H I+R R RD V+G
Sbjct: 1271 PPLVHSKTPEGNNGRSGDPRPQAAEPPDHLTITRRRTWSRDEVMG 1315
>AL606534-2|CAI12945.1| 1460|Homo sapiens centrosomal protein 170kDa
protein.
Length = 1460
Score = 29.5 bits (63), Expect = 7.3
Identities = 16/45 (35%), Positives = 22/45 (48%), Gaps = 1/45 (2%)
Frame = -2
Query: 227 PGTLYGKTAPFKTNLDRSRRDEKAEPPEH-HISRYRLKQRDSVLG 96
P ++ KT R + AEPP+H I+R R RD V+G
Sbjct: 1245 PPLVHSKTPEGNNGRSGDPRPQAAEPPDHLTITRRRTWSRDEVMG 1289
>AL606534-1|CAI12942.1| 1557|Homo sapiens centrosomal protein 170kDa
protein.
Length = 1557
Score = 29.5 bits (63), Expect = 7.3
Identities = 16/45 (35%), Positives = 22/45 (48%), Gaps = 1/45 (2%)
Frame = -2
Query: 227 PGTLYGKTAPFKTNLDRSRRDEKAEPPEH-HISRYRLKQRDSVLG 96
P ++ KT R + AEPP+H I+R R RD V+G
Sbjct: 1342 PPLVHSKTPEGNNGRSGDPRPQAAEPPDHLTITRRRTWSRDEVMG 1386
>AB022659-1|BAA83380.1| 1460|Homo sapiens KARP-1-binding protein 3
protein.
Length = 1460
Score = 29.5 bits (63), Expect = 7.3
Identities = 16/45 (35%), Positives = 22/45 (48%), Gaps = 1/45 (2%)
Frame = -2
Query: 227 PGTLYGKTAPFKTNLDRSRRDEKAEPPEH-HISRYRLKQRDSVLG 96
P ++ KT R + AEPP+H I+R R RD V+G
Sbjct: 1245 PPLVHSKTPEGNNGRSGDPRPQAAEPPDHLTITRRRTWSRDEVMG 1289
>AB022658-1|BAA83379.1| 1486|Homo sapiens KARP-1-binding protein 2
(KAB2) protein.
Length = 1486
Score = 29.5 bits (63), Expect = 7.3
Identities = 16/45 (35%), Positives = 22/45 (48%), Gaps = 1/45 (2%)
Frame = -2
Query: 227 PGTLYGKTAPFKTNLDRSRRDEKAEPPEH-HISRYRLKQRDSVLG 96
P ++ KT R + AEPP+H I+R R RD V+G
Sbjct: 1271 PPLVHSKTPEGNNGRSGDPRPQAAEPPDHLTITRRRTWSRDEVMG 1315
>AB022657-1|BAA83378.1| 1584|Homo sapiens KARP-1-binding protein 1
(KAB1) protein.
Length = 1584
Score = 29.5 bits (63), Expect = 7.3
Identities = 16/45 (35%), Positives = 22/45 (48%), Gaps = 1/45 (2%)
Frame = -2
Query: 227 PGTLYGKTAPFKTNLDRSRRDEKAEPPEH-HISRYRLKQRDSVLG 96
P ++ KT R + AEPP+H I+R R RD V+G
Sbjct: 1369 PPLVHSKTPEGNNGRSGDPRPQAAEPPDHLTITRRRTWSRDEVMG 1413
>AB007939-1|BAA32315.2| 1472|Homo sapiens KIAA0470 protein protein.
Length = 1472
Score = 29.5 bits (63), Expect = 7.3
Identities = 16/45 (35%), Positives = 22/45 (48%), Gaps = 1/45 (2%)
Frame = -2
Query: 227 PGTLYGKTAPFKTNLDRSRRDEKAEPPEH-HISRYRLKQRDSVLG 96
P ++ KT R + AEPP+H I+R R RD V+G
Sbjct: 1257 PPLVHSKTPEGNNGRSGDPRPQAAEPPDHLTITRRRTWSRDEVMG 1301
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 67,671,178
Number of Sequences: 237096
Number of extensions: 1396190
Number of successful extensions: 4189
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 3994
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4189
length of database: 76,859,062
effective HSP length: 85
effective length of database: 56,705,902
effective search space used: 4876707572
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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