Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= epV30480
(364 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
03_05_0373 + 23581812-23583293 32 0.12
11_01_0616 - 4933787-4934533,4935590-4935680,4935719-4936203 28 2.0
08_02_0592 + 19064025-19066596,19067036-19067084,19068530-190686... 27 3.4
07_03_0441 + 18256103-18258076 27 3.4
06_01_0008 + 141405-142421 27 3.4
03_06_0311 + 33054022-33054118,33056109-33056353,33057058-330573... 27 3.4
03_06_0040 + 31240164-31241102,31241280-31241897 27 3.4
03_03_0038 + 13984525-13984917,13985351-13985429,13985535-139856... 27 4.5
03_02_0579 - 9606317-9606892,9607571-9607799,9607902-9608011,960... 27 4.5
10_08_0798 + 20649370-20649428,20649515-20649719 27 6.0
10_08_0425 - 17806117-17806401,17806862-17806984,17807076-178072... 27 6.0
05_01_0154 + 1020650-1022050,1022304-1022373,1022496-1022617,102... 27 6.0
04_04_0623 + 26669284-26669421,26670906-26671564,26671948-266721... 27 6.0
04_01_0416 - 5504415-5504590,5509032-5509116,5509190-5509322,550... 27 6.0
04_01_0180 + 2034021-2034023,2034741-2035088 27 6.0
12_02_0775 - 23049842-23051299 26 7.9
05_01_0201 - 1441063-1443836,1444658-1445758,1446367-1447179,144... 26 7.9
03_02_0411 + 8217324-8218172 26 7.9
>03_05_0373 + 23581812-23583293
Length = 493
Score = 32.3 bits (70), Expect = 0.12
Identities = 14/30 (46%), Positives = 17/30 (56%)
Frame = -2
Query: 357 WRSXRRQGGPCGAPRPCARCSASTVPKPPW 268
W++ GG A +RCSAST PK PW
Sbjct: 49 WQTNDGAGGYGSAASSPSRCSASTPPKSPW 78
>11_01_0616 - 4933787-4934533,4935590-4935680,4935719-4936203
Length = 440
Score = 28.3 bits (60), Expect = 2.0
Identities = 15/60 (25%), Positives = 24/60 (40%)
Frame = -1
Query: 361 AVAFXSTSGWALRSSSAVRSMFCLDCSKASLALPFACVXKRSLETLGEGVELLPARTRSR 182
AVAF G+ + A+ + D ++AL F C +L + G + R R
Sbjct: 255 AVAFSPPGGYVAAGAPALAGRYAFDAFMYAVALAFTCSMLATLSLMYAGTAAVEMNVRHR 314
>08_02_0592 +
19064025-19066596,19067036-19067084,19068530-19068605,
19068767-19068922
Length = 950
Score = 27.5 bits (58), Expect = 3.4
Identities = 14/36 (38%), Positives = 17/36 (47%)
Frame = -2
Query: 354 RSXRRQGGPCGAPRPCARCSASTVPKPPWPCRSRVS 247
R +R GG G R +A + P PP P R VS
Sbjct: 105 REEKRHGGELGTKRGLEERAARSPPPPPPPKRRAVS 140
>07_03_0441 + 18256103-18258076
Length = 657
Score = 27.5 bits (58), Expect = 3.4
Identities = 18/42 (42%), Positives = 21/42 (50%), Gaps = 3/42 (7%)
Frame = -2
Query: 318 PRPCARCSASTVPKP-PWPCR--SRVSXSXPWRLLAKALSCC 202
PRP A SAS+ P P PW R S + S P L A + C
Sbjct: 42 PRPYAASSASSSPTPSPWLARVVSLILRSPPATLAADLRAFC 83
>06_01_0008 + 141405-142421
Length = 338
Score = 27.5 bits (58), Expect = 3.4
Identities = 17/38 (44%), Positives = 18/38 (47%), Gaps = 3/38 (7%)
Frame = -2
Query: 324 GAPRPCARCSASTVPKPPWPCR---SRVSXSXPWRLLA 220
G+ RP A SAS P P P R R S PW L A
Sbjct: 259 GSHRPAAPASASASPSPAPPPRLAERRFRISLPWPLRA 296
>03_06_0311 +
33054022-33054118,33056109-33056353,33057058-33057398,
33057488-33057538,33057623-33057695,33058229-33058333,
33060124-33060206,33061209-33061249,33061659-33063120,
33063368-33064847,33064958-33065122,33065232-33065424,
33065502-33065613,33065702-33065849,33065951-33066148,
33066234-33066512,33066612-33066773,33066872-33067090,
33067481-33067612
Length = 1861
Score = 27.5 bits (58), Expect = 3.4
Identities = 15/47 (31%), Positives = 23/47 (48%)
Frame = +2
Query: 137 SPSQRTHRTSARLGRTAPSPCWQQLNAFAKSLQGXLXDTRERQGQGG 277
S S+ + TS +LG P C +L KSL+ + DT + + G
Sbjct: 116 STSRGSKDTSKKLGGWRPLGCQLKLGKDKKSLKSSVKDTNRTKSKSG 162
>03_06_0040 + 31240164-31241102,31241280-31241897
Length = 518
Score = 27.5 bits (58), Expect = 3.4
Identities = 17/54 (31%), Positives = 26/54 (48%), Gaps = 2/54 (3%)
Frame = +1
Query: 28 ALAQGAMVRRDAPDFFKDIEHHTKEFHKTLEQQFNSLTKSKDAQDFSKA--WKD 183
A+AQ RR+APD D+ +E L+ + N L + + D+ A W D
Sbjct: 190 AIAQSKTTRREAPDADTDMSMEAQELRHVLD-ELNPLIGAANLWDYLPALRWFD 242
>03_03_0038 +
13984525-13984917,13985351-13985429,13985535-13985628,
13985712-13985844
Length = 232
Score = 27.1 bits (57), Expect = 4.5
Identities = 12/41 (29%), Positives = 18/41 (43%)
Frame = -2
Query: 282 PKPPWPCRSRVSXSXPWRLLAKALSCCQHGLGAVLPSLAEV 160
P PP P + + W+ A +CC+ G PS E+
Sbjct: 82 PPPPPPKQEKAKRVVRWKCAAGCGACCKLDKGPDFPSPEEI 122
>03_02_0579 - 9606317-9606892,9607571-9607799,9607902-9608011,
9608898-9609275,9609380-9609658,9610044-9610168,
9610269-9610335,9610582-9612006
Length = 1062
Score = 27.1 bits (57), Expect = 4.5
Identities = 19/58 (32%), Positives = 32/58 (55%)
Frame = -2
Query: 237 PWRLLAKALSCCQHGLGAVLPSLAEVLCVL*LGERVKLLF*SLMELLGVVFDVLEEVG 64
PW LLA ++S H L +P LA+V ++ L LL ++ + ++ +VL+ VG
Sbjct: 988 PWLLLAMSVSFGLHFLILYVPFLAQVFGIVPLSFNEWLLVIAVAFPVVLIDEVLKFVG 1045
>10_08_0798 + 20649370-20649428,20649515-20649719
Length = 87
Score = 26.6 bits (56), Expect = 6.0
Identities = 11/27 (40%), Positives = 13/27 (48%)
Frame = -2
Query: 354 RSXRRQGGPCGAPRPCARCSASTVPKP 274
R RR G CG CA C ++T P
Sbjct: 57 RENRRAGCSCGDSCTCASCGSTTTTAP 83
>10_08_0425 -
17806117-17806401,17806862-17806984,17807076-17807222,
17807307-17807450,17808557-17808668,17808762-17808898,
17809016-17809156,17810921-17811004,17811275-17811742,
17811858-17811936,17812494-17812506,17813884-17814460,
17814502-17814774,17814899-17815045,17815354-17815413,
17816124-17816510
Length = 1058
Score = 26.6 bits (56), Expect = 6.0
Identities = 10/42 (23%), Positives = 20/42 (47%)
Frame = +1
Query: 52 RRDAPDFFKDIEHHTKEFHKTLEQQFNSLTKSKDAQDFSKAW 177
+R A + +K + E H L + + +KD ++F + W
Sbjct: 727 QRAAVEAYKQLLEEASEGHTILIHKMQDINSNKDYKEFKRKW 768
>05_01_0154 + 1020650-1022050,1022304-1022373,1022496-1022617,
1022753-1023031,1023402-1023779,1024079-1024188,
1024394-1024622,1024725-1025303
Length = 1055
Score = 26.6 bits (56), Expect = 6.0
Identities = 20/62 (32%), Positives = 32/62 (51%)
Frame = -2
Query: 237 PWRLLAKALSCCQHGLGAVLPSLAEVLCVL*LGERVKLLF*SLMELLGVVFDVLEEVGSV 58
PW LLA ++S H L +P LA+V ++ L LL + + ++ +VL+ VG
Sbjct: 980 PWLLLAMSVSFGLHFLILYVPFLAQVFGIVPLSLNEWLLVLLVALPVVLIDEVLKFVGRC 1039
Query: 57 AS 52
S
Sbjct: 1040 TS 1041
>04_04_0623 +
26669284-26669421,26670906-26671564,26671948-26672140,
26672220-26672284,26672399-26672609,26673284-26673515,
26674463-26674521,26674651-26674680,26674761-26674850
Length = 558
Score = 26.6 bits (56), Expect = 6.0
Identities = 11/24 (45%), Positives = 12/24 (50%)
Frame = -2
Query: 342 RQGGPCGAPRPCARCSASTVPKPP 271
R G P P P S ST P+PP
Sbjct: 66 RAGVPAAPPHPTYSISCSTPPRPP 89
>04_01_0416 -
5504415-5504590,5509032-5509116,5509190-5509322,
5509426-5510312
Length = 426
Score = 26.6 bits (56), Expect = 6.0
Identities = 10/27 (37%), Positives = 15/27 (55%)
Frame = +3
Query: 27 RSGPRSDGATRRSRLLQGHRTPHQGVP 107
RSG + G + L++GHR H +P
Sbjct: 121 RSGRSNQGLPSKLPLIEGHRRSHSDIP 147
>04_01_0180 + 2034021-2034023,2034741-2035088
Length = 116
Score = 26.6 bits (56), Expect = 6.0
Identities = 12/26 (46%), Positives = 17/26 (65%)
Frame = +3
Query: 273 EALEQSRQNIERTAEELRKAHPDVXK 350
EALE+ QN+ R EE +K H ++ K
Sbjct: 52 EALERQVQNLTRYKEEKQKQHANLQK 77
>12_02_0775 - 23049842-23051299
Length = 485
Score = 26.2 bits (55), Expect = 7.9
Identities = 19/54 (35%), Positives = 23/54 (42%), Gaps = 4/54 (7%)
Frame = -2
Query: 342 RQGGPCGAPRPCARCSASTVPKPP---WPCRSRVSXSXPW-RLLAKALSCCQHG 193
R G PC A P A A+ V PP P + S W +L A L+ HG
Sbjct: 139 RHGVPCVALLPSAAVMAAWVVPPPATSSPSPAAAMPSYEWEKLKASFLAATSHG 192
>05_01_0201 -
1441063-1443836,1444658-1445758,1446367-1447179,
1447386-1447440
Length = 1580
Score = 26.2 bits (55), Expect = 7.9
Identities = 13/41 (31%), Positives = 16/41 (39%)
Frame = -2
Query: 330 PCGAPRPCARCSASTVPKPPWPCRSRVSXSXPWRLLAKALS 208
P AP P S P P PC+S V L A ++
Sbjct: 264 PVAAPSPAPCVSPVAAPSPAPPCKSPVPEDKSCELTANTVT 304
>03_02_0411 + 8217324-8218172
Length = 282
Score = 26.2 bits (55), Expect = 7.9
Identities = 13/22 (59%), Positives = 14/22 (63%)
Frame = -2
Query: 336 GGPCGAPRPCARCSASTVPKPP 271
GGPC A ARCSA+TV P
Sbjct: 90 GGPCAA---TARCSAATVAVSP 108
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 9,788,448
Number of Sequences: 37544
Number of extensions: 192122
Number of successful extensions: 1032
Number of sequences better than 10.0: 18
Number of HSP's better than 10.0 without gapping: 997
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1032
length of database: 14,793,348
effective HSP length: 73
effective length of database: 12,052,636
effective search space used: 566473892
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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