Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= epV30480
(364 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z49938-4|CAA90189.3| 2180|Caenorhabditis elegans Hypothetical pr... 33 0.061
Z46811-1|CAA86842.3| 2180|Caenorhabditis elegans Hypothetical pr... 33 0.061
AF316539-1|AAK01632.1| 2200|Caenorhabditis elegans PTP-3A protein. 33 0.061
AC087794-2|AAG53703.2| 840|Caenorhabditis elegans Hypothetical ... 32 0.14
U00040-1|AAA50664.3| 1770|Caenorhabditis elegans Hypothetical pr... 31 0.25
AC006834-9|AAL11490.1| 447|Caenorhabditis elegans Hypothetical ... 31 0.25
L07144-12|AAM54162.1| 1053|Caenorhabditis elegans Hypothetical p... 30 0.57
Z81088-4|CAB03125.1| 105|Caenorhabditis elegans Hypothetical pr... 28 1.7
AC006661-7|AAF39888.2| 1427|Caenorhabditis elegans Hypothetical ... 28 2.3
U41274-5|AAA82461.2| 571|Caenorhabditis elegans Nematode astaci... 27 3.0
AF039713-10|AAB96721.1| 691|Caenorhabditis elegans Hypothetical... 27 3.0
AL132952-24|CAB61143.2| 351|Caenorhabditis elegans Hypothetical... 27 4.0
AF045646-7|AAK29833.2| 321|Caenorhabditis elegans Hypothetical ... 27 4.0
AF045645-6|AAC02608.1| 314|Caenorhabditis elegans Collagen prot... 27 4.0
Z81118-3|CAB03325.1| 346|Caenorhabditis elegans Hypothetical pr... 27 5.3
Z93394-7|CAD59169.1| 196|Caenorhabditis elegans Hypothetical pr... 26 7.0
Z81592-8|CAB04730.1| 365|Caenorhabditis elegans Hypothetical pr... 26 7.0
AL117203-25|CAD59172.1| 196|Caenorhabditis elegans Hypothetical... 26 7.0
AL110482-6|CAB60339.1| 179|Caenorhabditis elegans Hypothetical ... 26 7.0
AL032658-2|CAA21744.1| 687|Caenorhabditis elegans Hypothetical ... 26 7.0
AF000298-11|AAM97960.1| 518|Caenorhabditis elegans Prion-like-(... 26 7.0
AF000298-10|AAM97961.1| 539|Caenorhabditis elegans Prion-like-(... 26 7.0
AF000298-8|AAC48255.2| 524|Caenorhabditis elegans Prion-like-(q... 26 7.0
Z74472-4|CAA98942.1| 301|Caenorhabditis elegans Hypothetical pr... 26 9.3
V00147-1|CAA23463.1| 296|Caenorhabditis elegans protein ( Caeno... 26 9.3
U80846-3|AAC70890.1| 2232|Caenorhabditis elegans Hypothetical pr... 26 9.3
U41534-3|AAB47595.1| 1119|Caenorhabditis elegans Hypothetical pr... 26 9.3
J01047-1|AAA27988.1| 296|Caenorhabditis elegans protein ( C.ele... 26 9.3
>Z49938-4|CAA90189.3| 2180|Caenorhabditis elegans Hypothetical
protein C09D8.1a protein.
Length = 2180
Score = 33.1 bits (72), Expect = 0.061
Identities = 14/31 (45%), Positives = 20/31 (64%)
Frame = -1
Query: 241 RSLETLGEGVELLPARTRSRPSKPC*SPVRP 149
RS +G G+E LP +++PSKP +PV P
Sbjct: 413 RSAGPVGVGLESLPVEAQTKPSKPATAPVSP 443
>Z46811-1|CAA86842.3| 2180|Caenorhabditis elegans Hypothetical
protein C09D8.1a protein.
Length = 2180
Score = 33.1 bits (72), Expect = 0.061
Identities = 14/31 (45%), Positives = 20/31 (64%)
Frame = -1
Query: 241 RSLETLGEGVELLPARTRSRPSKPC*SPVRP 149
RS +G G+E LP +++PSKP +PV P
Sbjct: 413 RSAGPVGVGLESLPVEAQTKPSKPATAPVSP 443
>AF316539-1|AAK01632.1| 2200|Caenorhabditis elegans PTP-3A protein.
Length = 2200
Score = 33.1 bits (72), Expect = 0.061
Identities = 14/31 (45%), Positives = 20/31 (64%)
Frame = -1
Query: 241 RSLETLGEGVELLPARTRSRPSKPC*SPVRP 149
RS +G G+E LP +++PSKP +PV P
Sbjct: 413 RSAGPVGVGLESLPVEAQTKPSKPATAPVSP 443
>AC087794-2|AAG53703.2| 840|Caenorhabditis elegans Hypothetical
protein Y32G9A.6 protein.
Length = 840
Score = 31.9 bits (69), Expect = 0.14
Identities = 16/58 (27%), Positives = 32/58 (55%), Gaps = 4/58 (6%)
Frame = +1
Query: 67 DFFKDIEHHTKEFHKTLEQQFNSLTKSKDAQDFS----KAWKDGSESVLATAQRLRQE 228
+ F ++ TK+ H + + L ++K +++FS + WK E+++A A+R R E
Sbjct: 379 EIFTPLDLATKQNHVVVVEYLTKLCRAKSSKEFSPEYIENWKTNFEAMVAEARRKRNE 436
>U00040-1|AAA50664.3| 1770|Caenorhabditis elegans Hypothetical
protein C18H2.1 protein.
Length = 1770
Score = 31.1 bits (67), Expect = 0.25
Identities = 16/50 (32%), Positives = 26/50 (52%)
Frame = +1
Query: 10 VLFACIALAQGAMVRRDAPDFFKDIEHHTKEFHKTLEQQFNSLTKSKDAQ 159
V C++ + + D +F KDI+ K+ HKTLE + + K +D Q
Sbjct: 580 VFLECVSRLRKTAI--DGENFVKDIQKTYKKSHKTLESDSSPVLKLEDPQ 627
>AC006834-9|AAL11490.1| 447|Caenorhabditis elegans Hypothetical
protein ZK973.11 protein.
Length = 447
Score = 31.1 bits (67), Expect = 0.25
Identities = 15/33 (45%), Positives = 19/33 (57%), Gaps = 1/33 (3%)
Frame = +1
Query: 97 KEFHKTLEQQFNSLTKSKDAQD-FSKAWKDGSE 192
+EFHKT E+ L K D + F AW DGS+
Sbjct: 266 REFHKTAEEASKELRKHPDLWNRFQFAWLDGSD 298
>L07144-12|AAM54162.1| 1053|Caenorhabditis elegans Hypothetical
protein R05D3.1 protein.
Length = 1053
Score = 29.9 bits (64), Expect = 0.57
Identities = 15/54 (27%), Positives = 24/54 (44%), Gaps = 2/54 (3%)
Frame = +1
Query: 40 GAMVRRDAPDFFKDIEHHTKEFH--KTLEQQFNSLTKSKDAQDFSKAWKDGSES 195
G +A ++F D++HHT F T + + +D D K W SE+
Sbjct: 519 GTSTSNEAREYFSDLDHHTVNFKYTGTTDDDAIRMAFDRDKSDERKEWIRRSEN 572
>Z81088-4|CAB03125.1| 105|Caenorhabditis elegans Hypothetical
protein F53F1.4 protein.
Length = 105
Score = 28.3 bits (60), Expect = 1.7
Identities = 10/22 (45%), Positives = 12/22 (54%)
Frame = -2
Query: 336 GGPCGAPRPCARCSASTVPKPP 271
GG CG P PC + + V PP
Sbjct: 65 GGGCGGPAPCGGAAPAYVAPPP 86
>AC006661-7|AAF39888.2| 1427|Caenorhabditis elegans Hypothetical
protein H20J04.2 protein.
Length = 1427
Score = 27.9 bits (59), Expect = 2.3
Identities = 16/45 (35%), Positives = 22/45 (48%)
Frame = +1
Query: 100 EFHKTLEQQFNSLTKSKDAQDFSKAWKDGSESVLATAQRLRQESP 234
+F LEQ+ N L + K Q KAW G E A+ L + +P
Sbjct: 680 KFRGHLEQRQNELVELKREQKKLKAWDVGQEGEANAARLLLELAP 724
>U41274-5|AAA82461.2| 571|Caenorhabditis elegans Nematode astacin
protease protein15 protein.
Length = 571
Score = 27.5 bits (58), Expect = 3.0
Identities = 17/64 (26%), Positives = 30/64 (46%)
Frame = -1
Query: 337 GWALRSSSAVRSMFCLDCSKASLALPFACVXKRSLETLGEGVELLPARTRSRPSKPC*SP 158
GW +R+ +R+ + C + +P K ++T + A T +RP KP P
Sbjct: 368 GWCIRNPGWMRANCPISCG---MCIPTKETQKPYVQTTTQA-----ATTTARPQKPVTQP 419
Query: 157 VRPL 146
++PL
Sbjct: 420 IQPL 423
>AF039713-10|AAB96721.1| 691|Caenorhabditis elegans Hypothetical
protein F57B10.4 protein.
Length = 691
Score = 27.5 bits (58), Expect = 3.0
Identities = 10/30 (33%), Positives = 17/30 (56%)
Frame = +1
Query: 76 KDIEHHTKEFHKTLEQQFNSLTKSKDAQDF 165
KD+++H K+ H L Q + + + D DF
Sbjct: 67 KDVKNHQKKLHSFLAQSTDQVNSTIDKMDF 96
>AL132952-24|CAB61143.2| 351|Caenorhabditis elegans Hypothetical
protein Y51H4A.9 protein.
Length = 351
Score = 27.1 bits (57), Expect = 4.0
Identities = 12/28 (42%), Positives = 14/28 (50%)
Frame = -2
Query: 339 QGGPCGAPRPCARCSASTVPKPPWPCRS 256
Q GP GAP + S +P PP P S
Sbjct: 221 QKGPSGAPGAPGQSGGSALPGPPGPAGS 248
>AF045646-7|AAK29833.2| 321|Caenorhabditis elegans Hypothetical
protein F56B3.8 protein.
Length = 321
Score = 27.1 bits (57), Expect = 4.0
Identities = 11/25 (44%), Positives = 15/25 (60%)
Frame = +3
Query: 24 HRSGPRSDGATRRSRLLQGHRTPHQ 98
HR GP GAT R+L+ R P++
Sbjct: 92 HRRGPADQGATYDERILEIRRDPNR 116
>AF045645-6|AAC02608.1| 314|Caenorhabditis elegans Collagen protein
101 protein.
Length = 314
Score = 27.1 bits (57), Expect = 4.0
Identities = 11/25 (44%), Positives = 14/25 (56%)
Frame = -2
Query: 339 QGGPCGAPRPCARCSASTVPKPPWP 265
Q GP GAP R +++P PP P
Sbjct: 184 QKGPSGAPGQPGRSGGASLPGPPGP 208
>Z81118-3|CAB03325.1| 346|Caenorhabditis elegans Hypothetical
protein T10G3.2 protein.
Length = 346
Score = 26.6 bits (56), Expect = 5.3
Identities = 16/39 (41%), Positives = 20/39 (51%)
Frame = +2
Query: 122 NSLTRSPSQRTHRTSARLGRTAPSPCWQQLNAFAKSLQG 238
NSL R P +R+H S G T+PS N F +L G
Sbjct: 289 NSLRRRPVRRSHPISPSPG-TSPSSVVTIQNVFGMTLSG 326
>Z93394-7|CAD59169.1| 196|Caenorhabditis elegans Hypothetical
protein Y48E1C.1c protein.
Length = 196
Score = 26.2 bits (55), Expect = 7.0
Identities = 13/31 (41%), Positives = 17/31 (54%), Gaps = 3/31 (9%)
Frame = +1
Query: 142 KSKDAQDFSKAWKDG---SESVLATAQRLRQ 225
K KDA D AW++G E + T+ LRQ
Sbjct: 17 KKKDADDEKNAWEEGDFIDEKITNTSSLLRQ 47
>Z81592-8|CAB04730.1| 365|Caenorhabditis elegans Hypothetical
protein T16G1.8 protein.
Length = 365
Score = 26.2 bits (55), Expect = 7.0
Identities = 12/32 (37%), Positives = 14/32 (43%)
Frame = -2
Query: 336 GGPCGAPRPCARCSASTVPKPPWPCRSRVSXS 241
G PC P P C+ T+ PC S S S
Sbjct: 29 GCPCPVPPPVPICAPQTICAQQAPCSSSSSYS 60
>AL117203-25|CAD59172.1| 196|Caenorhabditis elegans Hypothetical
protein Y48E1C.1c protein.
Length = 196
Score = 26.2 bits (55), Expect = 7.0
Identities = 13/31 (41%), Positives = 17/31 (54%), Gaps = 3/31 (9%)
Frame = +1
Query: 142 KSKDAQDFSKAWKDG---SESVLATAQRLRQ 225
K KDA D AW++G E + T+ LRQ
Sbjct: 17 KKKDADDEKNAWEEGDFIDEKITNTSSLLRQ 47
>AL110482-6|CAB60339.1| 179|Caenorhabditis elegans Hypothetical
protein Y39G8B.7 protein.
Length = 179
Score = 26.2 bits (55), Expect = 7.0
Identities = 10/39 (25%), Positives = 13/39 (33%)
Frame = -2
Query: 318 PRPCARCSASTVPKPPWPCRSRVSXSXPWRLLAKALSCC 202
P C C +T P P C+ W +CC
Sbjct: 99 PETCNMCPGATTPTPDSNCKDCSPNCASWAKRGFCTNCC 137
>AL032658-2|CAA21744.1| 687|Caenorhabditis elegans Hypothetical
protein Y76A2B.3 protein.
Length = 687
Score = 26.2 bits (55), Expect = 7.0
Identities = 10/18 (55%), Positives = 10/18 (55%)
Frame = -2
Query: 333 GPCGAPRPCARCSASTVP 280
G CGAP PCA VP
Sbjct: 465 GHCGAPAPCALVKLGDVP 482
>AF000298-11|AAM97960.1| 518|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 75,
isoform b protein.
Length = 518
Score = 26.2 bits (55), Expect = 7.0
Identities = 13/35 (37%), Positives = 19/35 (54%)
Frame = -2
Query: 339 QGGPCGAPRPCARCSASTVPKPPWPCRSRVSXSXP 235
+GGP G PR + S+ + +P P RS + S P
Sbjct: 383 RGGPRGGPRKSSEESSESREEPRGPRRSPPTGSPP 417
>AF000298-10|AAM97961.1| 539|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 75,
isoform c protein.
Length = 539
Score = 26.2 bits (55), Expect = 7.0
Identities = 13/35 (37%), Positives = 19/35 (54%)
Frame = -2
Query: 339 QGGPCGAPRPCARCSASTVPKPPWPCRSRVSXSXP 235
+GGP G PR + S+ + +P P RS + S P
Sbjct: 404 RGGPRGGPRKSSEESSESREEPRGPRRSPPTGSPP 438
>AF000298-8|AAC48255.2| 524|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 75,
isoform a protein.
Length = 524
Score = 26.2 bits (55), Expect = 7.0
Identities = 13/35 (37%), Positives = 19/35 (54%)
Frame = -2
Query: 339 QGGPCGAPRPCARCSASTVPKPPWPCRSRVSXSXP 235
+GGP G PR + S+ + +P P RS + S P
Sbjct: 389 RGGPRGGPRKSSEESSESREEPRGPRRSPPTGSPP 423
>Z74472-4|CAA98942.1| 301|Caenorhabditis elegans Hypothetical
protein F23H12.4 protein.
Length = 301
Score = 25.8 bits (54), Expect = 9.3
Identities = 12/36 (33%), Positives = 15/36 (41%)
Frame = -2
Query: 336 GGPCGAPRPCARCSASTVPKPPWPCRSRVSXSXPWR 229
GGP P P +C +P PP P + P R
Sbjct: 86 GGPEVNPAPNLQCEGCCLPGPPGPAGAPGKPGKPGR 121
>V00147-1|CAA23463.1| 296|Caenorhabditis elegans protein (
Caenorhabditis elegansgene Col-1 coding for a collagen.
).
Length = 296
Score = 25.8 bits (54), Expect = 9.3
Identities = 12/36 (33%), Positives = 15/36 (41%)
Frame = -2
Query: 336 GGPCGAPRPCARCSASTVPKPPWPCRSRVSXSXPWR 229
GGP P P +C +P PP P + P R
Sbjct: 81 GGPEVNPAPNLQCEGCCLPGPPGPAGAPGKPGKPGR 116
>U80846-3|AAC70890.1| 2232|Caenorhabditis elegans Hypothetical protein
K06A9.1b protein.
Length = 2232
Score = 25.8 bits (54), Expect = 9.3
Identities = 11/24 (45%), Positives = 15/24 (62%)
Frame = +2
Query: 125 SLTRSPSQRTHRTSARLGRTAPSP 196
++T SPSQ T T L ++PSP
Sbjct: 1976 TITPSPSQSTESTQTSLPSSSPSP 1999
>U41534-3|AAB47595.1| 1119|Caenorhabditis elegans Hypothetical
protein C16A3.7 protein.
Length = 1119
Score = 25.8 bits (54), Expect = 9.3
Identities = 12/38 (31%), Positives = 16/38 (42%)
Frame = -2
Query: 312 PCARCSASTVPKPPWPCRSRVSXSXPWRLLAKALSCCQ 199
PCA P P PC++ V S + K CC+
Sbjct: 738 PCALPCHEDSPCEPSPCKASVRISCECGRIKKDAPCCE 775
>J01047-1|AAA27988.1| 296|Caenorhabditis elegans protein (
C.elegans (nematode)collagen 1 (col-1) gene, complete
cds. ).
Length = 296
Score = 25.8 bits (54), Expect = 9.3
Identities = 12/36 (33%), Positives = 15/36 (41%)
Frame = -2
Query: 336 GGPCGAPRPCARCSASTVPKPPWPCRSRVSXSXPWR 229
GGP P P +C +P PP P + P R
Sbjct: 81 GGPEVNPAPNLQCEGCCLPGPPGPAGAPGKPGKPGR 116
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 7,485,375
Number of Sequences: 27780
Number of extensions: 137091
Number of successful extensions: 663
Number of sequences better than 10.0: 28
Number of HSP's better than 10.0 without gapping: 633
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 663
length of database: 12,740,198
effective HSP length: 73
effective length of database: 10,712,258
effective search space used: 503476126
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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