Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= epV30478
         (500 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

09_04_0160 + 15226762-15227032,15227138-15227373,15227469-152275...    29   1.6  
02_01_0121 + 890391-890429,890565-890730,891209-891769,892365-89...    29   1.6  
05_03_0361 - 12961101-12961201,12961683-12961772,12961910-129619...    29   2.8  
03_06_0438 - 33917678-33918084,33929568-33930402,33931055-339313...    28   3.7  
02_01_0293 + 1955439-1956457,1957002-1957322,1957405-1957411,195...    28   4.8  
05_07_0136 + 27934367-27934884,27936174-27936317,27937582-279376...    27   6.4  
03_05_1149 + 30753463-30754695,30754834-30755017,30755321-307565...    27   6.4  
11_06_0309 + 22265906-22266929,22267451-22267629,22267966-222681...    27   8.5  

>09_04_0160 +
           15226762-15227032,15227138-15227373,15227469-15227565,
           15227657-15227783,15227870-15228482,15228572-15228835,
           15228918-15229130,15229253-15229460,15229552-15229748,
           15229830-15230183,15230287-15230874
          Length = 1055

 Score = 29.5 bits (63), Expect = 1.6
 Identities = 13/33 (39%), Positives = 17/33 (51%)
 Frame = +1

Query: 226 EFKIDNSHAHCDLSYNIHTRATVYVSGRMGCAR 324
           EF I NSH H + S ++H R   Y     G A+
Sbjct: 173 EFPISNSHGHGEFSSSLHKRIHPYPVSEPGSAK 205


>02_01_0121 +
           890391-890429,890565-890730,891209-891769,892365-892845,
           892952-893033,893818-894021
          Length = 510

 Score = 29.5 bits (63), Expect = 1.6
 Identities = 26/105 (24%), Positives = 42/105 (40%)
 Frame = +2

Query: 89  KRTIFGGGRDRATMDVVIEFDETQDARDKEKLPLKSK*HQDCVTSLNLKSTIVMLTATSL 268
           ++T FGGGR  AT  VV+E  E  D +  +  P + K       ++N           + 
Sbjct: 184 EKTSFGGGRLPATK-VVLEATEEIDTKRVD--PSQEKREIGWQKAVNWAPPDPYPEVETC 240

Query: 269 TTSILELQSTSVEEWAVHARHQVDTNVILILVCVPSQPFHRSIEI 403
             S L  + T  +     +RH     +     C+P  P  RS+ +
Sbjct: 241 AKSALAEEITVADSAVTFSRHDSSATLQSATTCIPPPPTVRSVSM 285


>05_03_0361 -
           12961101-12961201,12961683-12961772,12961910-12961980,
           12962079-12962158,12962264-12962324,12963620-12963681,
           12963826-12963833,12964273-12964609,12964946-12965089,
           12965235-12965339
          Length = 352

 Score = 28.7 bits (61), Expect = 2.8
 Identities = 8/14 (57%), Positives = 13/14 (92%)
 Frame = +1

Query: 67  KGKKGVVEEDNIWW 108
           +G++GVVEE+ +WW
Sbjct: 162 RGERGVVEEEGLWW 175


>03_06_0438 -
           33917678-33918084,33929568-33930402,33931055-33931335,
           33931358-33931451,33931549-33931857
          Length = 641

 Score = 28.3 bits (60), Expect = 3.7
 Identities = 12/27 (44%), Positives = 18/27 (66%)
 Frame = +1

Query: 298 VSGRMGCAREASSGHECYLNPSLCPLS 378
           ++GR   AR  ++G++CYLN  L P S
Sbjct: 310 LTGRQWVARNLANGNKCYLNFRLRPAS 336


>02_01_0293 +
           1955439-1956457,1957002-1957322,1957405-1957411,
           1957954-1958041,1958143-1958324,1958508-1958644,
           1958790-1958856,1959132-1959246,1959390-1959501,
           1960420-1960495,1960576-1960758,1961166-1961326,
           1961463-1961532,1962721-1962928,1963015-1963304,
           1963388-1963509,1963605-1963749,1964040-1964113,
           1964464-1964911
          Length = 1274

 Score = 27.9 bits (59), Expect = 4.8
 Identities = 13/41 (31%), Positives = 23/41 (56%)
 Frame = +1

Query: 358 PSLCPLSTFSPLYRN*FILTLHRKIVVVIT*LASRITSCPL 480
           P+  P   FSPL+RN   +T  R+++V     ++ ++  PL
Sbjct: 265 PAFTPKLCFSPLWRNILYVTFPRELIVFDLNYSTALSVTPL 305


>05_07_0136 +
           27934367-27934884,27936174-27936317,27937582-27937648,
           27938013-27938036
          Length = 250

 Score = 27.5 bits (58), Expect = 6.4
 Identities = 13/33 (39%), Positives = 17/33 (51%), Gaps = 2/33 (6%)
 Frame = -1

Query: 143 QLQHPW*LCLYHHQIL--SSSTTPFFPLEGLSG 51
           Q Q PW    YHH ++  S+ TTP    E  +G
Sbjct: 35  QQQQPWSFIDYHHHLMQESAPTTPPLDYEAFAG 67


>03_05_1149 +
           30753463-30754695,30754834-30755017,30755321-30756549,
           30756702-30756816,30757126-30758084
          Length = 1239

 Score = 27.5 bits (58), Expect = 6.4
 Identities = 11/12 (91%), Positives = 11/12 (91%)
 Frame = +1

Query: 364 LCPLSTFSPLYR 399
           LCPLSTFSPL R
Sbjct: 356 LCPLSTFSPLQR 367


>11_06_0309 +
           22265906-22266929,22267451-22267629,22267966-22268179,
           22268273-22268510,22268617-22268767,22268934-22269158
          Length = 676

 Score = 27.1 bits (57), Expect = 8.5
 Identities = 10/23 (43%), Positives = 14/23 (60%)
 Frame = -1

Query: 500 AGCSQGFKGHEVIREASYVITTT 432
           AGC   F GH+++  +S   TTT
Sbjct: 118 AGCQLRFSGHDILNRSSNSTTTT 140


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 12,692,546
Number of Sequences: 37544
Number of extensions: 233829
Number of successful extensions: 508
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 503
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 508
length of database: 14,793,348
effective HSP length: 77
effective length of database: 11,902,460
effective search space used: 1059318940
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)