Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= epV30476
(516 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_15870| Best HMM Match : No HMM Matches (HMM E-Value=.) 103 1e-22
SB_54666| Best HMM Match : No HMM Matches (HMM E-Value=.) 82 3e-16
SB_28512| Best HMM Match : No HMM Matches (HMM E-Value=.) 62 2e-10
SB_53794| Best HMM Match : Mito_carr (HMM E-Value=0.00014) 59 2e-09
SB_18218| Best HMM Match : Mito_carr (HMM E-Value=0) 51 5e-07
SB_50582| Best HMM Match : Mito_carr (HMM E-Value=2.1e-23) 42 3e-04
SB_31912| Best HMM Match : No HMM Matches (HMM E-Value=.) 41 5e-04
SB_11756| Best HMM Match : Mito_carr (HMM E-Value=0) 40 0.001
SB_4905| Best HMM Match : Mito_carr (HMM E-Value=3.3e-13) 40 0.001
SB_3139| Best HMM Match : Mito_carr (HMM E-Value=0) 40 0.002
SB_1246| Best HMM Match : Mito_carr (HMM E-Value=1.4013e-45) 38 0.004
SB_54004| Best HMM Match : Mito_carr (HMM E-Value=0) 38 0.004
SB_17703| Best HMM Match : Mito_carr (HMM E-Value=0) 38 0.004
SB_49149| Best HMM Match : Mito_carr (HMM E-Value=4.7e-22) 38 0.005
SB_42958| Best HMM Match : Mito_carr (HMM E-Value=4.60046e-42) 37 0.011
SB_51010| Best HMM Match : Mito_carr (HMM E-Value=0) 35 0.035
SB_46794| Best HMM Match : Mito_carr (HMM E-Value=1.12104e-44) 35 0.035
SB_16884| Best HMM Match : No HMM Matches (HMM E-Value=.) 35 0.035
SB_36589| Best HMM Match : Mito_carr (HMM E-Value=0) 35 0.035
SB_32253| Best HMM Match : Mito_carr (HMM E-Value=1.6e-31) 35 0.046
SB_27773| Best HMM Match : Mito_carr (HMM E-Value=0) 34 0.060
SB_23056| Best HMM Match : No HMM Matches (HMM E-Value=.) 34 0.060
SB_46795| Best HMM Match : Mito_carr (HMM E-Value=0) 34 0.080
SB_8951| Best HMM Match : Mito_carr (HMM E-Value=0) 34 0.080
SB_45843| Best HMM Match : No HMM Matches (HMM E-Value=.) 33 0.11
SB_52834| Best HMM Match : Mito_carr (HMM E-Value=6.7e-34) 33 0.14
SB_47003| Best HMM Match : Mito_carr (HMM E-Value=2.3e-29) 32 0.24
SB_34206| Best HMM Match : No HMM Matches (HMM E-Value=.) 32 0.32
SB_17535| Best HMM Match : C2 (HMM E-Value=2.7e-14) 30 1.3
SB_27933| Best HMM Match : Mito_carr (HMM E-Value=6.9e-17) 30 1.3
SB_29345| Best HMM Match : Mito_carr (HMM E-Value=0) 29 1.7
SB_6736| Best HMM Match : efhand (HMM E-Value=2.6e-21) 29 2.3
SB_39097| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 3.0
SB_37560| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 3.0
SB_12356| Best HMM Match : zf-CCHC (HMM E-Value=0.018) 29 3.0
SB_31675| Best HMM Match : zf-CCHC (HMM E-Value=0.012) 28 4.0
SB_11434| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 4.0
SB_3432| Best HMM Match : 7tm_1 (HMM E-Value=3.8e-28) 28 5.3
SB_45532| Best HMM Match : 7tm_1 (HMM E-Value=2.6e-40) 28 5.3
SB_28925| Best HMM Match : Pkinase_Tyr (HMM E-Value=0) 28 5.3
SB_16877| Best HMM Match : Mito_carr (HMM E-Value=0) 28 5.3
SB_26637| Best HMM Match : zf-CCHC (HMM E-Value=0.018) 27 6.9
SB_154| Best HMM Match : RVT_1 (HMM E-Value=0.00044) 27 6.9
SB_55367| Best HMM Match : Granulin (HMM E-Value=0.00023) 27 9.2
>SB_15870| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 304
Score = 103 bits (246), Expect = 1e-22
Identities = 52/93 (55%), Positives = 62/93 (66%), Gaps = 1/93 (1%)
Frame = +3
Query: 213 FAKDFLAGGIXAAVSKTAVAPIERVKLLLQVQ-HVSKQIAADQRYKGIXDAFVRIPKEQG 389
F ++F G A +SKTA APIERVKLL+Q Q + K D YKG+ D R + +G
Sbjct: 9 FVENFGLSGAAAIISKTAAAPIERVKLLVQNQDEMLKAGRLDHPYKGVIDCTSRTYRSEG 68
Query: 390 LLSFWRGNFANVIXYFPTQALNFAFKDKYKQVF 488
LSFWRGN AN I YFPTQALNFAFKD+ K +F
Sbjct: 69 FLSFWRGNLANCIRYFPTQALNFAFKDQVKALF 101
Score = 35.1 bits (77), Expect = 0.035
Identities = 19/99 (19%), Positives = 43/99 (43%)
Frame = +3
Query: 198 ADPVAFAKDFLAGGIXAAVSKTAVAPIERVKLLLQVQHVSKQIAADQRYKGIXDAFVRIP 377
++ + F+K+ +GG A+S V ++ + L + ++++ G+ D + +
Sbjct: 108 SNAIKFSKNIASGGAAGAMSLFFVYSLDYCRTRLANDAKVGKKGGERQFNGMIDVYKKTI 167
Query: 378 KEQGLLSFWRGNFANVIXYFPTQALNFAFKDKYKQVFLG 494
GL+ +RG + + + F D K + LG
Sbjct: 168 ASDGLVGLYRGFVISCVGIIVYRGFYFGLYDTLKPILLG 206
Score = 32.7 bits (71), Expect = 0.18
Identities = 15/51 (29%), Positives = 30/51 (58%)
Frame = +3
Query: 339 RYKGIXDAFVRIPKEQGLLSFWRGNFANVIXYFPTQALNFAFKDKYKQVFL 491
+YKG D ++I K++G +S +G AN++ + F DK+K++++
Sbjct: 248 KYKGSIDCTIQILKKEGAMSLMKGAGANILRGMAGAGVLAGF-DKFKELYV 297
>SB_54666| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 262
Score = 81.8 bits (193), Expect = 3e-16
Identities = 39/88 (44%), Positives = 60/88 (68%)
Frame = +3
Query: 219 KDFLAGGIXAAVSKTAVAPIERVKLLLQVQHVSKQIAADQRYKGIXDAFVRIPKEQGLLS 398
K LAGGI AVS+T+V+P+ERVK+LLQ+Q + ++KG+ ++I KE+G+L
Sbjct: 36 KHLLAGGIAGAVSRTSVSPLERVKILLQIQ------VKNPKFKGVLPTLIQIGKEEGILG 89
Query: 399 FWRGNFANVIXYFPTQALNFAFKDKYKQ 482
+++GN NVI FP A+ FA ++YK+
Sbjct: 90 YFKGNGTNVIRIFPYSAVQFAAYEEYKK 117
>SB_28512| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 453
Score = 62.5 bits (145), Expect = 2e-10
Identities = 39/92 (42%), Positives = 51/92 (55%)
Frame = +3
Query: 234 GGIXAAVSKTAVAPIERVKLLLQVQHVSKQIAADQRYKGIXDAFVRIPKEQGLLSFWRGN 413
GG A VS+TA AP++R+K+LLQVQ A+ GI F + +E G+ S WRGN
Sbjct: 143 GGALAGVSRTATAPLDRLKVLLQVQ------ASSTNRFGIVSGFKMMLREGGIKSLWRGN 196
Query: 414 FANVIXYFPTQALNFAFKDKYKQVFLGGVDXK 509
ANVI P + F +K K+ L G D K
Sbjct: 197 GANVIKIAPESGIKFFAYEKAKK--LVGSDTK 226
Score = 41.5 bits (93), Expect = 4e-04
Identities = 23/88 (26%), Positives = 46/88 (52%)
Frame = +3
Query: 228 LAGGIXAAVSKTAVAPIERVKLLLQVQHVSKQIAADQRYKGIXDAFVRIPKEQGLLSFWR 407
LAG + S+T++ P+E +K L ++ + Y+G+ A I +++G+ SF+R
Sbjct: 235 LAGSMAGVASQTSIYPLEVLKTRLAIRKTGQ-------YRGLLHAASVIYQKEGIRSFYR 287
Query: 408 GNFANVIXYFPTQALNFAFKDKYKQVFL 491
G F +++ P ++ A + K +L
Sbjct: 288 GLFPSLLGIIPYAGIDLAVYETLKNFYL 315
>SB_53794| Best HMM Match : Mito_carr (HMM E-Value=0.00014)
Length = 76
Score = 58.8 bits (136), Expect = 2e-09
Identities = 32/75 (42%), Positives = 43/75 (57%), Gaps = 1/75 (1%)
Frame = +3
Query: 186 MSNLADPVAFAKDFLAGGIXAAVSKTAVAPIERVKLLLQVQ-HVSKQIAADQRYKGIXDA 362
MS + F ++F G A +SKTA APIERVKLL+Q Q + K YKG+ D
Sbjct: 1 MSGKKQNLHFVENFALSGAAAIISKTAAAPIERVKLLVQNQDEMLKAGRLSSPYKGVVDC 60
Query: 363 FVRIPKEQGLLSFWR 407
+R + +G+ SFWR
Sbjct: 61 TMRTYRAEGIGSFWR 75
>SB_18218| Best HMM Match : Mito_carr (HMM E-Value=0)
Length = 375
Score = 51.2 bits (117), Expect = 5e-07
Identities = 25/85 (29%), Positives = 45/85 (52%)
Frame = +3
Query: 207 VAFAKDFLAGGIXAAVSKTAVAPIERVKLLLQVQHVSKQIAADQRYKGIXDAFVRIPKEQ 386
+ + + FL GG A ++++ +P+E VK+L QV + G+ F + K +
Sbjct: 56 ITWFQSFLCGGTSAVLARSLTSPLEVVKVLAQV-------GTQEAKPGLIRTFASVYKRE 108
Query: 387 GLLSFWRGNFANVIXYFPTQALNFA 461
G+ +FW+GN + I FP A+ +A
Sbjct: 109 GIKAFWKGNGVSCIRLFPYSAVQYA 133
Score = 44.4 bits (100), Expect = 6e-05
Identities = 25/71 (35%), Positives = 38/71 (53%)
Frame = +3
Query: 228 LAGGIXAAVSKTAVAPIERVKLLLQVQHVSKQIAADQRYKGIXDAFVRIPKEQGLLSFWR 407
LAG ++ V P E +K L VQHV+K A YKG+ A I +E+G+L+ ++
Sbjct: 157 LAGTSSTLIAMVTVYPCEVIKTRLTVQHVNKSNA---HYKGMRHALKTILREEGILALYK 213
Query: 408 GNFANVIXYFP 440
G + + FP
Sbjct: 214 GVTPSFLGLFP 224
>SB_50582| Best HMM Match : Mito_carr (HMM E-Value=2.1e-23)
Length = 1026
Score = 41.9 bits (94), Expect = 3e-04
Identities = 23/83 (27%), Positives = 40/83 (48%)
Frame = +3
Query: 240 IXAAVSKTAVAPIERVKLLLQVQHVSKQIAADQRYKGIXDAFVRIPKEQGLLSFWRGNFA 419
I A TAV PI+ VK +Q Q + A++ YK D F ++ + +G + +RG
Sbjct: 922 IKKATGATAVYPIDLVKTRMQNQRAV--LEAEKVYKNSIDCFFKVVRNEGPIGLYRGLLP 979
Query: 420 NVIXYFPTQALNFAFKDKYKQVF 488
++ P +A+ D + +F
Sbjct: 980 QLLGVSPEKAIKLTTNDFVRGIF 1002
>SB_31912| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 179
Score = 41.1 bits (92), Expect = 5e-04
Identities = 21/79 (26%), Positives = 36/79 (45%), Gaps = 3/79 (3%)
Frame = +3
Query: 183 KMSNLADPVAFAKDFLAGGIXAAVSKTAVAPIERVKLLLQVQ---HVSKQIAADQRYKGI 353
K+ N P + G + +SK + P + +K +QVQ + Q+Y G+
Sbjct: 19 KVHNPYKPADVIESLTCGALSGMISKAVILPFDIIKKRIQVQGFEEARQSFGRVQQYDGV 78
Query: 354 XDAFVRIPKEQGLLSFWRG 410
D F I KE+G + ++G
Sbjct: 79 KDCFRTILKEEGAMGLFKG 97
>SB_11756| Best HMM Match : Mito_carr (HMM E-Value=0)
Length = 274
Score = 40.3 bits (90), Expect = 0.001
Identities = 21/76 (27%), Positives = 39/76 (51%)
Frame = +3
Query: 231 AGGIXAAVSKTAVAPIERVKLLLQVQHVSKQIAADQRYKGIXDAFVRIPKEQGLLSFWRG 410
AG + +AP++ VK+ LQ+Q +K+ + Y+G D V++ + +GL ++G
Sbjct: 39 AGSVAGLAQVPLIAPVDLVKIKLQMQTEAKR-STRSVYRGPVDCLVKLYRSRGLAGCFQG 97
Query: 411 NFANVIXYFPTQALNF 458
N + P A+ F
Sbjct: 98 NTVTAVRDIPGFAVYF 113
Score = 37.5 bits (83), Expect = 0.006
Identities = 27/90 (30%), Positives = 42/90 (46%)
Frame = +3
Query: 189 SNLADPVAFAKDFLAGGIXAAVSKTAVAPIERVKLLLQVQHVSKQIAADQRYKGIXDAFV 368
SNL A +AGG VS + P + +K +Q + RYKG+ D +
Sbjct: 124 SNLFGSRGVATYLMAGGFAGVVSWASTFPFDVIKSRIQADGNLGKF----RYKGMMDCAL 179
Query: 369 RIPKEQGLLSFWRGNFANVIXYFPTQALNF 458
+ KE+G++ F RG + ++ F Q L F
Sbjct: 180 QSYKEEGMIVFTRGIWPTLLRGF-LQVLRF 208
>SB_4905| Best HMM Match : Mito_carr (HMM E-Value=3.3e-13)
Length = 577
Score = 39.9 bits (89), Expect = 0.001
Identities = 22/61 (36%), Positives = 33/61 (54%)
Frame = +3
Query: 228 LAGGIXAAVSKTAVAPIERVKLLLQVQHVSKQIAADQRYKGIXDAFVRIPKEQGLLSFWR 407
L G ++ V P E +K L VQHV+K A YKG+ A I +E+G+L+ ++
Sbjct: 426 LVGTSSTLIAMVTVYPCEVIKTRLTVQHVNKSNA---HYKGMRHALKTILREEGILALYK 482
Query: 408 G 410
G
Sbjct: 483 G 483
>SB_3139| Best HMM Match : Mito_carr (HMM E-Value=0)
Length = 276
Score = 39.5 bits (88), Expect = 0.002
Identities = 27/113 (23%), Positives = 53/113 (46%), Gaps = 9/113 (7%)
Frame = +3
Query: 201 DPVAFAKDFLAGGIXAAVSKTAVAPIERVKLLLQVQHVSKQIAA---------DQRYKGI 353
DP K F + GI A++++ A PI+ K+ LQ+Q S +A+ D Y+G+
Sbjct: 11 DPSILVK-FCSAGIAASIAEAATIPIDTAKVRLQIQGESAVMASIAQGVRTTHDAHYRGM 69
Query: 354 XDAFVRIPKEQGLLSFWRGNFANVIXYFPTQALNFAFKDKYKQVFLGGVDXKH 512
V + K +G+ + ++G + ++ D+ K ++ G D ++
Sbjct: 70 LGTMVTLFKTEGMKTMYKGLIPGIHRQLCFASIRIGLYDQVKAMY-GDTDVQN 121
>SB_1246| Best HMM Match : Mito_carr (HMM E-Value=1.4013e-45)
Length = 773
Score = 38.3 bits (85), Expect = 0.004
Identities = 13/48 (27%), Positives = 29/48 (60%)
Frame = +3
Query: 339 RYKGIXDAFVRIPKEQGLLSFWRGNFANVIXYFPTQALNFAFKDKYKQ 482
+Y G+ +I +++GL +++GN N++ P A+ FA +++K+
Sbjct: 590 KYSGVGGTLAKIYRDEGLYGYFKGNGTNIVRIVPYTAVQFAAYEEFKK 637
>SB_54004| Best HMM Match : Mito_carr (HMM E-Value=0)
Length = 309
Score = 38.3 bits (85), Expect = 0.004
Identities = 20/81 (24%), Positives = 41/81 (50%)
Frame = +3
Query: 216 AKDFLAGGIXAAVSKTAVAPIERVKLLLQVQHVSKQIAADQRYKGIXDAFVRIPKEQGLL 395
A++ +AG + + A P++ +K+ LQ + K +KG D F++ + +GL
Sbjct: 21 ARNLIAGSVSGMLGCAAGQPLDLLKVRLQAMNQVKP-GETAPFKGAMDCFMKTVRLEGLR 79
Query: 396 SFWRGNFANVIXYFPTQALNF 458
++G + ++ P+ AL F
Sbjct: 80 GLYKGMLSPLLMATPSTALTF 100
>SB_17703| Best HMM Match : Mito_carr (HMM E-Value=0)
Length = 611
Score = 38.3 bits (85), Expect = 0.004
Identities = 21/75 (28%), Positives = 33/75 (44%)
Frame = +3
Query: 225 FLAGGIXAAVSKTAVAPIERVKLLLQVQHVSKQIAADQRYKGIXDAFVRIPKEQGLLSFW 404
F +GGI +S P++ VK Q + +Y G D +I G+ +F
Sbjct: 361 FFSGGIAGTLSWILTYPVDMVKSCYQADGRTNSGKPQYKYNGYADCVKKIYISGGVSAFG 420
Query: 405 RGNFANVIXYFPTQA 449
+G A ++ FPT A
Sbjct: 421 QGLLATILRGFPTNA 435
>SB_49149| Best HMM Match : Mito_carr (HMM E-Value=4.7e-22)
Length = 95
Score = 37.9 bits (84), Expect = 0.005
Identities = 16/55 (29%), Positives = 31/55 (56%)
Frame = +3
Query: 324 IAADQRYKGIXDAFVRIPKEQGLLSFWRGNFANVIXYFPTQALNFAFKDKYKQVF 488
I ++Y G+ +AF RI +++G+ +F+RG +I P ++F + K+ F
Sbjct: 19 ITQKKKYTGLINAFTRIYRDEGMRTFYRGYVPTLIGIMPYAGISFFTYETCKKAF 73
>SB_42958| Best HMM Match : Mito_carr (HMM E-Value=4.60046e-42)
Length = 247
Score = 36.7 bits (81), Expect = 0.011
Identities = 19/47 (40%), Positives = 28/47 (59%)
Frame = +3
Query: 270 APIERVKLLLQVQHVSKQIAADQRYKGIXDAFVRIPKEQGLLSFWRG 410
AP ERVK LLQVQ K+ RY+G+ D +++ + GL ++G
Sbjct: 179 APTERVKCLLQVQ---KESGTKARYQGLGDCLLQVYRTGGLRGVFKG 222
>SB_51010| Best HMM Match : Mito_carr (HMM E-Value=0)
Length = 306
Score = 35.1 bits (77), Expect = 0.035
Identities = 19/62 (30%), Positives = 32/62 (51%), Gaps = 1/62 (1%)
Frame = +3
Query: 228 LAGGIXAAVSKTAVA-PIERVKLLLQVQHVSKQIAADQRYKGIXDAFVRIPKEQGLLSFW 404
+ G+ + V +A+A P + VK+ Q + + I YK + AF +I K++G L W
Sbjct: 118 IVAGVSSGVIGSAIATPTDLVKIRFQAVKIGETIP----YKNMFHAFYKIAKKEGFLGLW 173
Query: 405 RG 410
G
Sbjct: 174 TG 175
Score = 27.1 bits (57), Expect = 9.2
Identities = 17/66 (25%), Positives = 30/66 (45%), Gaps = 1/66 (1%)
Frame = +3
Query: 228 LAGGIXAAVSKTAVA-PIERVKLLLQVQHVSKQIAADQRYKGIXDAFVRIPKEQGLLSFW 404
LA + A T VA P++ V+ Q + Y+G D + + +G+L+ +
Sbjct: 215 LASALVAGFVATCVASPVDIVRTRFMTQPKDTK-GRPLVYQGTLDCIYKTVRHEGILALY 273
Query: 405 RGNFAN 422
+G F N
Sbjct: 274 KGFFPN 279
>SB_46794| Best HMM Match : Mito_carr (HMM E-Value=1.12104e-44)
Length = 192
Score = 35.1 bits (77), Expect = 0.035
Identities = 24/94 (25%), Positives = 37/94 (39%), Gaps = 3/94 (3%)
Frame = +3
Query: 225 FLAGGIXAAVSKTAVAPIERVKLLLQVQHVSKQIAADQRYKGIXDAFVRIPKEQGLLSFW 404
F A I + A P++ K +Q + I YKG D RI + +G+ + W
Sbjct: 97 FGASMISGLATTVASMPVDIAKTRIQNMRI---IDGKPEYKGTMDVLARIVRNEGVFALW 153
Query: 405 RGNFANVIXYFPTQALNFAFKDKYKQV---FLGG 497
+G P L F F ++ + F GG
Sbjct: 154 KGFTPYYFRIGPHTVLTFIFLEQLNRAANYFYGG 187
Score = 34.3 bits (75), Expect = 0.060
Identities = 15/50 (30%), Positives = 24/50 (48%)
Frame = +3
Query: 342 YKGIXDAFVRIPKEQGLLSFWRGNFANVIXYFPTQALNFAFKDKYKQVFL 491
Y + +A R+ KE+G+L+ WRG + A A + KQ+ L
Sbjct: 35 YTNVFNALYRMSKEEGVLTLWRGYIPTAVRAMVVNAAQLATYSQAKQLLL 84
>SB_16884| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 300
Score = 35.1 bits (77), Expect = 0.035
Identities = 25/81 (30%), Positives = 36/81 (44%)
Frame = +3
Query: 219 KDFLAGGIXAAVSKTAVAPIERVKLLLQVQHVSKQIAADQRYKGIXDAFVRIPKEQGLLS 398
K LAGGI + P E VK LQ+ + AA Y+G D + K G+L
Sbjct: 42 KAILAGGIAGGLEICCTFPTEYVKTQLQLD----EKAAKPIYRGPIDCVKKTVKGHGVLG 97
Query: 399 FWRGNFANVIXYFPTQALNFA 461
+RG + + P ++ FA
Sbjct: 98 LYRGLSSLLYGSVPKASVRFA 118
>SB_36589| Best HMM Match : Mito_carr (HMM E-Value=0)
Length = 264
Score = 35.1 bits (77), Expect = 0.035
Identities = 22/87 (25%), Positives = 41/87 (47%), Gaps = 1/87 (1%)
Frame = +3
Query: 225 FLAGGIXAAVSKTAVAPIERVKLLLQVQHVSKQIAADQRYKGIXDAFVRIPKEQGL-LSF 401
F+ GG+ AVS+T P++ V+ +Q ++ + +Y + V + K+ G+
Sbjct: 176 FVCGGVAGAVSQTIAYPLDVVRRRMQ---LAGAVPDGHKYNTCINTLVNVYKDDGIRRGL 232
Query: 402 WRGNFANVIXYFPTQALNFAFKDKYKQ 482
+RG N + P A+ F + KQ
Sbjct: 233 YRGLSINYLRVCPQVAIMFGVYEVTKQ 259
Score = 33.1 bits (72), Expect = 0.14
Identities = 15/45 (33%), Positives = 27/45 (60%)
Frame = +3
Query: 351 IXDAFVRIPKEQGLLSFWRGNFANVIXYFPTQALNFAFKDKYKQV 485
+ AF I + +GLL++++GN A ++ FP A+ F + Y +V
Sbjct: 13 VLTAFRAIYRNEGLLAYFKGNGAMMLRTFPYGAVQFLSYEHYSKV 57
>SB_32253| Best HMM Match : Mito_carr (HMM E-Value=1.6e-31)
Length = 233
Score = 34.7 bits (76), Expect = 0.046
Identities = 22/81 (27%), Positives = 39/81 (48%)
Frame = +3
Query: 219 KDFLAGGIXAAVSKTAVAPIERVKLLLQVQHVSKQIAADQRYKGIXDAFVRIPKEQGLLS 398
+ FLAGG + V +T P++ + L +Q Q + KG + G
Sbjct: 107 RGFLAGGCASIVGQTITVPVDIISQKLMIQ---GQGDRKVKLKGARILIRETFHQHGPGG 163
Query: 399 FWRGNFANVIXYFPTQALNFA 461
F++G FA+++ Y P+ A+ +A
Sbjct: 164 FYKGYFASLMTYAPSSAIWWA 184
>SB_27773| Best HMM Match : Mito_carr (HMM E-Value=0)
Length = 203
Score = 34.3 bits (75), Expect = 0.060
Identities = 26/96 (27%), Positives = 41/96 (42%), Gaps = 2/96 (2%)
Frame = +3
Query: 228 LAGGIXAAVSKTAVAPIERVKLLLQVQHVSKQIAADQRYKGIXDAFVRIPKEQGLLSFWR 407
LAG A+ PIE +K LQ+ Y+G+ + KE+G+ +F+R
Sbjct: 2 LAGACATVFHDGAMNPIEVIKQRLQMY--------GSPYRGVIHCATSVFKEEGIRAFYR 53
Query: 408 GNFANVIXYFPTQALNFAFKDKYKQVF--LGGVDXK 509
+ P Q L+F + ++ LGG D K
Sbjct: 54 SYTTQLSMNIPFQTLHFTVYEYARKALNPLGGYDPK 89
>SB_23056| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 266
Score = 34.3 bits (75), Expect = 0.060
Identities = 14/41 (34%), Positives = 22/41 (53%)
Frame = +3
Query: 357 DAFVRIPKEQGLLSFWRGNFANVIXYFPTQALNFAFKDKYK 479
DA ++IP+ +GL S WRG ++ P + F D+ K
Sbjct: 65 DALIKIPRYEGLSSLWRGLPPTMVMAVPNTVIYFTLYDQLK 105
>SB_46795| Best HMM Match : Mito_carr (HMM E-Value=0)
Length = 328
Score = 33.9 bits (74), Expect = 0.080
Identities = 19/81 (23%), Positives = 36/81 (44%)
Frame = +3
Query: 219 KDFLAGGIXAAVSKTAVAPIERVKLLLQVQHVSKQIAADQRYKGIXDAFVRIPKEQGLLS 398
K+ +AG A + P++ +K+ LQ + K YK D F +I + +G+
Sbjct: 40 KNSIAGSAAGAAANLVGFPLDTIKVRLQAMPLPKP-GEPWMYKNSFDCFFKIIRNEGVYY 98
Query: 399 FWRGNFANVIXYFPTQALNFA 461
+RG ++ P + F+
Sbjct: 99 LFRGVTVPILNSIPNTTVLFS 119
Score = 31.9 bits (69), Expect = 0.32
Identities = 20/62 (32%), Positives = 33/62 (53%), Gaps = 1/62 (1%)
Frame = +3
Query: 228 LAGGIXAAVSKTAV-APIERVKLLLQVQHVSKQIAADQRYKGIXDAFVRIPKEQGLLSFW 404
LA G+ A V+ + V P++RVK +LQ++ + Y G D RI +E G+ +
Sbjct: 141 LAAGMIAGVATSFVLTPLDRVKCILQIE----KAFGGSSYGGPVDCLRRIYREAGVRGVY 196
Query: 405 RG 410
+G
Sbjct: 197 KG 198
>SB_8951| Best HMM Match : Mito_carr (HMM E-Value=0)
Length = 434
Score = 33.9 bits (74), Expect = 0.080
Identities = 19/72 (26%), Positives = 37/72 (51%)
Frame = +3
Query: 225 FLAGGIXAAVSKTAVAPIERVKLLLQVQHVSKQIAADQRYKGIXDAFVRIPKEQGLLSFW 404
F++G V+ + P++ V+ L VQ +S + ++ Y GI A RI E+G+ +
Sbjct: 32 FVSGATAGVVATASTHPLDVVRARLTVQDMSTRSISN--YTGIVSALRRIHIEEGIRGLY 89
Query: 405 RGNFANVIXYFP 440
+G +++ P
Sbjct: 90 KGLVPSLVSIAP 101
>SB_45843| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 796
Score = 33.5 bits (73), Expect = 0.11
Identities = 15/38 (39%), Positives = 25/38 (65%)
Frame = +3
Query: 372 IPKEQGLLSFWRGNFANVIXYFPTQALNFAFKDKYKQV 485
+P+E L W G F++VI F A+N AF+++YK++
Sbjct: 272 LPREVYLFYSWIGAFSSVINPFIYGAMNPAFREEYKKI 309
>SB_52834| Best HMM Match : Mito_carr (HMM E-Value=6.7e-34)
Length = 302
Score = 33.1 bits (72), Expect = 0.14
Identities = 19/70 (27%), Positives = 34/70 (48%)
Frame = +3
Query: 231 AGGIXAAVSKTAVAPIERVKLLLQVQHVSKQIAADQRYKGIXDAFVRIPKEQGLLSFWRG 410
AG + + AV P++ +K LQ+ + + + Y GI D +I +GL +F++G
Sbjct: 211 AGCLAGMTASVAVNPLDVIKTRLQLLNRPQ---GEPNYNGIIDCAKKIYSNEGLAAFYKG 267
Query: 411 NFANVIXYFP 440
+I P
Sbjct: 268 AVPRMIVIAP 277
>SB_47003| Best HMM Match : Mito_carr (HMM E-Value=2.3e-29)
Length = 868
Score = 32.3 bits (70), Expect = 0.24
Identities = 18/71 (25%), Positives = 32/71 (45%)
Frame = +3
Query: 273 PIERVKLLLQVQHVSKQIAADQRYKGIXDAFVRIPKEQGLLSFWRGNFANVIXYFPTQAL 452
PI+ K +QVQ + Q A +Y+ + A I + G+ ++G A ++ P
Sbjct: 221 PIDLFKSKMQVQIIRAQSGAPIQYRNVFHAGYTIAQTYGIRGCYQGLSATLVRNIPANGF 280
Query: 453 NFAFKDKYKQV 485
F F + K +
Sbjct: 281 FFGFYEFTKNL 291
>SB_34206| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 213
Score = 31.9 bits (69), Expect = 0.32
Identities = 14/38 (36%), Positives = 24/38 (63%)
Frame = +3
Query: 372 IPKEQGLLSFWRGNFANVIXYFPTQALNFAFKDKYKQV 485
+P+E +L W G ++VI F A+N F+D+YK++
Sbjct: 139 LPREVYVLYTWLGTLSSVINPFIYGAMNPVFRDEYKKL 176
>SB_17535| Best HMM Match : C2 (HMM E-Value=2.7e-14)
Length = 553
Score = 29.9 bits (64), Expect = 1.3
Identities = 18/53 (33%), Positives = 28/53 (52%)
Frame = +3
Query: 255 SKTAVAPIERVKLLLQVQHVSKQIAADQRYKGIXDAFVRIPKEQGLLSFWRGN 413
S+ VA ER +L+ Q Q +D RY+G D+F + +G L +RG+
Sbjct: 278 SRQTVACPERCGVLMASQGKRGQYMSDARYRGHLDSFRGDARYRGHLDSFRGD 330
>SB_27933| Best HMM Match : Mito_carr (HMM E-Value=6.9e-17)
Length = 187
Score = 29.9 bits (64), Expect = 1.3
Identities = 19/71 (26%), Positives = 35/71 (49%), Gaps = 1/71 (1%)
Frame = +3
Query: 219 KDFLAGGIXAAVSKTAVAPIERVKLLLQVQ-HVSKQIAADQRYKGIXDAFVRIPKEQGLL 395
K+F+ G A+ + P+E VK +Q+Q + + Y+ + A I K +G+L
Sbjct: 6 KEFVLGATAASGACFFTNPLEVVKTRMQLQGELKSRGTYSVYYRNVFHASYTIAKYEGIL 65
Query: 396 SFWRGNFANVI 428
+ +G F +I
Sbjct: 66 AMQKGLFPALI 76
>SB_29345| Best HMM Match : Mito_carr (HMM E-Value=0)
Length = 313
Score = 29.5 bits (63), Expect = 1.7
Identities = 18/80 (22%), Positives = 32/80 (40%)
Frame = +3
Query: 219 KDFLAGGIXAAVSKTAVAPIERVKLLLQVQHVSKQIAADQRYKGIXDAFVRIPKEQGLLS 398
K+F AGG P++ +K+ LQ K + G D ++ + +G
Sbjct: 28 KNFFAGGFGGVCCIATGHPLDTIKVRLQTMPRPKP-GEKPMFTGTFDCAMKTIRNEGFFG 86
Query: 399 FWRGNFANVIXYFPTQALNF 458
++G A + P A+ F
Sbjct: 87 LYKGMAAPITGVTPIFAICF 106
>SB_6736| Best HMM Match : efhand (HMM E-Value=2.6e-21)
Length = 198
Score = 29.1 bits (62), Expect = 2.3
Identities = 10/24 (41%), Positives = 17/24 (70%)
Frame = +3
Query: 231 AGGIXAAVSKTAVAPIERVKLLLQ 302
AGG+ S+T AP+E++K++ Q
Sbjct: 175 AGGVAGVASRTLTAPLEKMKIIAQ 198
>SB_39097| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 226
Score = 28.7 bits (61), Expect = 3.0
Identities = 15/35 (42%), Positives = 20/35 (57%), Gaps = 1/35 (2%)
Frame = +2
Query: 293 AAPSTARQQADRRRPALQGYRRR-LRPHPQGAGSP 394
A+ S RQQ R RP +GY +R R +P+ SP
Sbjct: 83 ASGSNQRQQQARGRPQARGYNQRSRRGYPRARASP 117
>SB_37560| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 706
Score = 28.7 bits (61), Expect = 3.0
Identities = 15/35 (42%), Positives = 20/35 (57%), Gaps = 1/35 (2%)
Frame = +2
Query: 293 AAPSTARQQADRRRPALQGYRRR-LRPHPQGAGSP 394
A+ S RQQ R RP +GY +R R +P+ SP
Sbjct: 183 ASGSNQRQQQARGRPQARGYNQRSRRGYPRARASP 217
>SB_12356| Best HMM Match : zf-CCHC (HMM E-Value=0.018)
Length = 404
Score = 28.7 bits (61), Expect = 3.0
Identities = 15/35 (42%), Positives = 20/35 (57%), Gaps = 1/35 (2%)
Frame = +2
Query: 293 AAPSTARQQADRRRPALQGYRRR-LRPHPQGAGSP 394
A+ S RQQ R RP +GY +R R +P+ SP
Sbjct: 261 ASGSNQRQQQARGRPQARGYNQRSRRGYPRARASP 295
>SB_31675| Best HMM Match : zf-CCHC (HMM E-Value=0.012)
Length = 550
Score = 28.3 bits (60), Expect = 4.0
Identities = 15/35 (42%), Positives = 19/35 (54%), Gaps = 1/35 (2%)
Frame = +2
Query: 293 AAPSTARQQADRRRPALQGYRRR-LRPHPQGAGSP 394
A+ S RQQ R RP GY +R R +P+ SP
Sbjct: 84 ASGSNQRQQQARGRPQASGYNQRSRRGYPRARASP 118
>SB_11434| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 866
Score = 28.3 bits (60), Expect = 4.0
Identities = 12/39 (30%), Positives = 23/39 (58%)
Frame = +3
Query: 375 PKEQGLLSFWRGNFANVIXYFPTQALNFAFKDKYKQVFL 491
P+E L W G ++VI F +N F++++K+++L
Sbjct: 815 PRELYLFYSWLGALSSVINPFIYGVMNPMFREEFKRIYL 853
>SB_3432| Best HMM Match : 7tm_1 (HMM E-Value=3.8e-28)
Length = 343
Score = 27.9 bits (59), Expect = 5.3
Identities = 14/39 (35%), Positives = 24/39 (61%)
Frame = +3
Query: 372 IPKEQGLLSFWRGNFANVIXYFPTQALNFAFKDKYKQVF 488
+P+E L + G ++VI F A+N F+++YK+VF
Sbjct: 263 LPRELYFLYTYVGVLSSVINPFIYGAMNPMFREEYKKVF 301
>SB_45532| Best HMM Match : 7tm_1 (HMM E-Value=2.6e-40)
Length = 368
Score = 27.9 bits (59), Expect = 5.3
Identities = 13/38 (34%), Positives = 24/38 (63%)
Frame = +3
Query: 372 IPKEQGLLSFWRGNFANVIXYFPTQALNFAFKDKYKQV 485
+P+E +L + G ++VI F A+N FK++YK++
Sbjct: 267 LPREVYVLYSFLGGLSSVINPFIYGAMNPIFKEQYKKI 304
>SB_28925| Best HMM Match : Pkinase_Tyr (HMM E-Value=0)
Length = 792
Score = 27.9 bits (59), Expect = 5.3
Identities = 14/52 (26%), Positives = 24/52 (46%), Gaps = 4/52 (7%)
Frame = +2
Query: 20 ISKKAHTYPLCSRDYEITPNLLFKNQELV----FRDPPSACAATPTSTYSPS 163
++ ++ Y C + E +P + + ++D SAC A P TY PS
Sbjct: 106 LTDESELYGYCQSNGEWSPAMYTSRHRCMCHAGYQDTVSACTACPRGTYKPS 157
>SB_16877| Best HMM Match : Mito_carr (HMM E-Value=0)
Length = 1024
Score = 27.9 bits (59), Expect = 5.3
Identities = 18/77 (23%), Positives = 32/77 (41%)
Frame = +3
Query: 228 LAGGIXAAVSKTAVAPIERVKLLLQVQHVSKQIAADQRYKGIXDAFVRIPKEQGLLSFWR 407
LA GI ++ + P E + L+ Q + Q+Y+ + +E+G +
Sbjct: 936 LAAGISKCIATSLCYPHEVARTRLRQQE--SEFLGRQKYRSFFQTLGTVLREEGWRGLYG 993
Query: 408 GNFANVIXYFPTQALNF 458
G +VI P A+ F
Sbjct: 994 GLGTHVIRQVPNTAIMF 1010
>SB_26637| Best HMM Match : zf-CCHC (HMM E-Value=0.018)
Length = 406
Score = 27.5 bits (58), Expect = 6.9
Identities = 14/35 (40%), Positives = 20/35 (57%), Gaps = 1/35 (2%)
Frame = +2
Query: 293 AAPSTARQQADRRRPALQGYRRR-LRPHPQGAGSP 394
A+ S RQQ R RP +GY +R R +P+ +P
Sbjct: 183 ASGSNQRQQQARGRPQARGYNQRSRRGYPRARATP 217
>SB_154| Best HMM Match : RVT_1 (HMM E-Value=0.00044)
Length = 1170
Score = 27.5 bits (58), Expect = 6.9
Identities = 16/44 (36%), Positives = 24/44 (54%), Gaps = 3/44 (6%)
Frame = +2
Query: 47 LCSRDYEITPNLLFKN---QELVFRDPPSACAATPTSTYSPSED 169
LC +D E++P LLF N +++ R P A P++ S ED
Sbjct: 54 LCGKDQEVSPKLLFGNDLAKQVRDRKKPPVW-ANPSAPQSAKED 96
>SB_55367| Best HMM Match : Granulin (HMM E-Value=0.00023)
Length = 565
Score = 27.1 bits (57), Expect = 9.2
Identities = 11/17 (64%), Positives = 13/17 (76%)
Frame = +2
Query: 329 RRPALQGYRRRLRPHPQ 379
RRP LQ R+R+RP PQ
Sbjct: 429 RRPGLQRDRKRMRPGPQ 445
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,069,829
Number of Sequences: 59808
Number of extensions: 268467
Number of successful extensions: 742
Number of sequences better than 10.0: 44
Number of HSP's better than 10.0 without gapping: 671
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 729
length of database: 16,821,457
effective HSP length: 77
effective length of database: 12,216,241
effective search space used: 1148326654
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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