Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= epV30475
(516 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_51961| Best HMM Match : No HMM Matches (HMM E-Value=.) 40 0.002
SB_17278| Best HMM Match : RVT_1 (HMM E-Value=0.0082) 40 0.002
SB_11764| Best HMM Match : DSHCT (HMM E-Value=1.9e-27) 40 0.002
SB_10927| Best HMM Match : RVT_1 (HMM E-Value=6.6e-39) 40 0.002
SB_33578| Best HMM Match : Exo_endo_phos (HMM E-Value=0.00076) 39 0.003
SB_33564| Best HMM Match : RVT_1 (HMM E-Value=0.1) 38 0.005
SB_43973| Best HMM Match : No HMM Matches (HMM E-Value=.) 38 0.005
SB_51257| Best HMM Match : Pox_F16 (HMM E-Value=4.1) 37 0.009
SB_14726| Best HMM Match : Ribosomal_L30 (HMM E-Value=6.6) 36 0.015
SB_58989| Best HMM Match : RVT_1 (HMM E-Value=0) 36 0.020
SB_49429| Best HMM Match : No HMM Matches (HMM E-Value=.) 35 0.035
SB_31373| Best HMM Match : Put_DNA-bind_N (HMM E-Value=8.4) 35 0.035
SB_4935| Best HMM Match : Pox_F16 (HMM E-Value=5.3) 35 0.035
SB_54752| Best HMM Match : No HMM Matches (HMM E-Value=.) 35 0.035
SB_42891| Best HMM Match : DUF537 (HMM E-Value=1.2e-23) 35 0.035
SB_33076| Best HMM Match : Put_DNA-bind_N (HMM E-Value=8.4) 35 0.035
SB_30407| Best HMM Match : No HMM Matches (HMM E-Value=.) 35 0.035
SB_25119| Best HMM Match : Ribosomal_S27 (HMM E-Value=9.4) 35 0.035
SB_20783| Best HMM Match : No HMM Matches (HMM E-Value=.) 35 0.035
SB_18046| Best HMM Match : RVT_1 (HMM E-Value=0.34) 35 0.035
SB_6030| Best HMM Match : rve (HMM E-Value=8.7e-30) 35 0.046
SB_26110| Best HMM Match : HipA_C (HMM E-Value=5.5) 35 0.046
SB_25497| Best HMM Match : No HMM Matches (HMM E-Value=.) 35 0.046
SB_14729| Best HMM Match : No HMM Matches (HMM E-Value=.) 35 0.046
SB_4310| Best HMM Match : RVT_1 (HMM E-Value=5e-28) 35 0.046
SB_31120| Best HMM Match : Pox_F16 (HMM E-Value=5) 34 0.080
SB_48112| Best HMM Match : No HMM Matches (HMM E-Value=.) 33 0.11
SB_32643| Best HMM Match : Carla_C4 (HMM E-Value=9.9) 33 0.14
SB_30049| Best HMM Match : FBA_2 (HMM E-Value=7) 33 0.14
SB_22775| Best HMM Match : No HMM Matches (HMM E-Value=.) 33 0.14
SB_19305| Best HMM Match : No HMM Matches (HMM E-Value=.) 33 0.14
SB_24816| Best HMM Match : No HMM Matches (HMM E-Value=.) 32 0.24
SB_19530| Best HMM Match : EMI (HMM E-Value=3.5) 32 0.24
SB_40765| Best HMM Match : DX (HMM E-Value=1.4) 32 0.24
SB_40344| Best HMM Match : No HMM Matches (HMM E-Value=.) 32 0.32
SB_16492| Best HMM Match : No HMM Matches (HMM E-Value=.) 32 0.32
SB_58576| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 0.43
SB_56220| Best HMM Match : RVT_1 (HMM E-Value=3.7e-16) 31 0.43
SB_43828| Best HMM Match : XPG_N (HMM E-Value=1.8) 31 0.43
SB_40983| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 0.43
SB_40552| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 0.43
SB_38731| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 0.43
SB_34180| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 0.43
SB_34116| Best HMM Match : RVT_1 (HMM E-Value=0) 31 0.43
SB_30890| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 0.43
SB_29924| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 0.43
SB_28979| Best HMM Match : RVT_1 (HMM E-Value=1.6e-40) 31 0.43
SB_26135| Best HMM Match : RVT_1 (HMM E-Value=0.072) 31 0.43
SB_24244| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 0.43
SB_22251| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 0.43
SB_19117| Best HMM Match : XPG_N (HMM E-Value=1.8) 31 0.43
SB_7946| Best HMM Match : DUF434 (HMM E-Value=7.5) 31 0.43
SB_2897| Best HMM Match : RVT_1 (HMM E-Value=3e-33) 31 0.43
SB_43541| Best HMM Match : RVT_1 (HMM E-Value=0) 31 0.43
SB_36764| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 0.43
SB_36762| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 0.43
SB_24298| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 0.43
SB_20120| Best HMM Match : RVT_1 (HMM E-Value=0) 31 0.43
SB_14496| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 0.43
SB_48902| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 0.98
SB_19427| Best HMM Match : RVT_1 (HMM E-Value=7.5e-32) 30 0.98
SB_38808| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 1.7
SB_29800| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 1.7
SB_33284| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 2.3
SB_33411| Best HMM Match : 7tm_1 (HMM E-Value=0.03) 28 4.0
SB_37654| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 5.3
SB_41259| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 6.9
SB_31047| Best HMM Match : CHORD (HMM E-Value=6.2) 27 6.9
SB_25515| Best HMM Match : Complex1_LYR (HMM E-Value=9.6) 27 9.2
>SB_51961| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 193
Score = 39.5 bits (88), Expect = 0.002
Identities = 17/37 (45%), Positives = 23/37 (62%)
Frame = +3
Query: 387 SRVHPHYLEPLRSSTMRFQRSFLPRTIRLWNELPSTV 497
+R H H L+S+ + + SF PR IR+WN LPS V
Sbjct: 122 TRRHNHSFLQLQSNILSYNYSFFPRAIRIWNLLPSNV 158
>SB_17278| Best HMM Match : RVT_1 (HMM E-Value=0.0082)
Length = 506
Score = 39.5 bits (88), Expect = 0.002
Identities = 17/37 (45%), Positives = 23/37 (62%)
Frame = +3
Query: 387 SRVHPHYLEPLRSSTMRFQRSFLPRTIRLWNELPSTV 497
+R H H L+S+ + + SF PR IR+WN LPS V
Sbjct: 441 TRRHNHSFLQLQSNILSYNYSFFPRAIRIWNLLPSNV 477
>SB_11764| Best HMM Match : DSHCT (HMM E-Value=1.9e-27)
Length = 1492
Score = 39.5 bits (88), Expect = 0.002
Identities = 17/37 (45%), Positives = 23/37 (62%)
Frame = +3
Query: 387 SRVHPHYLEPLRSSTMRFQRSFLPRTIRLWNELPSTV 497
+R H H L+S+ + + SF PR IR+WN LPS V
Sbjct: 1427 TRRHNHSFLQLQSNILSYNYSFFPRAIRIWNLLPSNV 1463
>SB_10927| Best HMM Match : RVT_1 (HMM E-Value=6.6e-39)
Length = 452
Score = 39.5 bits (88), Expect = 0.002
Identities = 17/37 (45%), Positives = 23/37 (62%)
Frame = +3
Query: 387 SRVHPHYLEPLRSSTMRFQRSFLPRTIRLWNELPSTV 497
+R H H L+S+ + + SF PR IR+WN LPS V
Sbjct: 387 TRRHNHSFLQLQSNILSYNYSFFPRAIRIWNLLPSNV 423
>SB_33578| Best HMM Match : Exo_endo_phos (HMM E-Value=0.00076)
Length = 888
Score = 38.7 bits (86), Expect = 0.003
Identities = 18/39 (46%), Positives = 23/39 (58%)
Frame = +3
Query: 396 HPHYLEPLRSSTMRFQRSFLPRTIRLWNELPSTVFLERY 512
HP + + + T F+ SF+PR IRLWN L TV L Y
Sbjct: 730 HPEHYDIPYARTNIFKYSFVPRAIRLWNSLEVTVVLAAY 768
>SB_33564| Best HMM Match : RVT_1 (HMM E-Value=0.1)
Length = 2075
Score = 37.9 bits (84), Expect = 0.005
Identities = 17/37 (45%), Positives = 22/37 (59%)
Frame = +3
Query: 387 SRVHPHYLEPLRSSTMRFQRSFLPRTIRLWNELPSTV 497
SR H L+++ + F SF PRTIR WN LP+ V
Sbjct: 1627 SRRHSRTYHQLQANILAFNYSFFPRTIRTWNLLPAEV 1663
>SB_43973| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 3142
Score = 37.9 bits (84), Expect = 0.005
Identities = 17/37 (45%), Positives = 22/37 (59%)
Frame = +3
Query: 387 SRVHPHYLEPLRSSTMRFQRSFLPRTIRLWNELPSTV 497
SR H L+++ + F SF PRTIR WN LP+ V
Sbjct: 1073 SRRHSRTYHQLQANILAFNYSFFPRTIRTWNLLPAEV 1109
>SB_51257| Best HMM Match : Pox_F16 (HMM E-Value=4.1)
Length = 243
Score = 37.1 bits (82), Expect = 0.009
Identities = 17/38 (44%), Positives = 22/38 (57%)
Frame = +3
Query: 384 RSRVHPHYLEPLRSSTMRFQRSFLPRTIRLWNELPSTV 497
RSR + ++S+ + SF PRTIR WN LPS V
Sbjct: 177 RSRTNSSKYNQIQSNVLSHSYSFFPRTIRTWNLLPSEV 214
>SB_14726| Best HMM Match : Ribosomal_L30 (HMM E-Value=6.6)
Length = 231
Score = 36.3 bits (80), Expect = 0.015
Identities = 15/34 (44%), Positives = 21/34 (61%)
Frame = +3
Query: 396 HPHYLEPLRSSTMRFQRSFLPRTIRLWNELPSTV 497
H + L + T ++ SFLPR +RLWN LP +V
Sbjct: 184 HSEFYTILNARTDIYKYSFLPRALRLWNNLPQSV 217
>SB_58989| Best HMM Match : RVT_1 (HMM E-Value=0)
Length = 885
Score = 35.9 bits (79), Expect = 0.020
Identities = 18/43 (41%), Positives = 22/43 (51%)
Frame = +3
Query: 378 RHRSRVHPHYLEPLRSSTMRFQRSFLPRTIRLWNELPSTVFLE 506
R R HP PL +S+ SF RTI WN LP+ +F E
Sbjct: 823 RKTRRSHPESFIPLSTSSASEHLSFFSRTIIQWNNLPALLFNE 865
>SB_49429| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 918
Score = 35.1 bits (77), Expect = 0.035
Identities = 16/37 (43%), Positives = 21/37 (56%)
Frame = +3
Query: 387 SRVHPHYLEPLRSSTMRFQRSFLPRTIRLWNELPSTV 497
SR + ++S+ + SF PRTIR WN LPS V
Sbjct: 853 SRTNSSKYNQIQSNVLSHSYSFFPRTIRTWNLLPSEV 889
>SB_31373| Best HMM Match : Put_DNA-bind_N (HMM E-Value=8.4)
Length = 198
Score = 35.1 bits (77), Expect = 0.035
Identities = 16/37 (43%), Positives = 21/37 (56%)
Frame = +3
Query: 387 SRVHPHYLEPLRSSTMRFQRSFLPRTIRLWNELPSTV 497
SR + ++S+ + SF PRTIR WN LPS V
Sbjct: 133 SRTNSSKYNQIQSNVLSHSYSFFPRTIRTWNLLPSEV 169
>SB_4935| Best HMM Match : Pox_F16 (HMM E-Value=5.3)
Length = 243
Score = 35.1 bits (77), Expect = 0.035
Identities = 16/37 (43%), Positives = 21/37 (56%)
Frame = +3
Query: 387 SRVHPHYLEPLRSSTMRFQRSFLPRTIRLWNELPSTV 497
SR + ++S+ + SF PRTIR WN LPS V
Sbjct: 178 SRTNSSKYNQIQSNVLSHSYSFFPRTIRTWNLLPSEV 214
>SB_54752| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 792
Score = 35.1 bits (77), Expect = 0.035
Identities = 16/42 (38%), Positives = 25/42 (59%), Gaps = 2/42 (4%)
Frame = +3
Query: 372 TARHRSR-VHPHYLEPLRSSTMRFQR-SFLPRTIRLWNELPS 491
T+R+ +R HP+ + + R S+ PRT++LWN LPS
Sbjct: 722 TSRYNTRSYHPNNYRLFSTHNQNYYRNSYFPRTVKLWNSLPS 763
>SB_42891| Best HMM Match : DUF537 (HMM E-Value=1.2e-23)
Length = 2386
Score = 35.1 bits (77), Expect = 0.035
Identities = 16/37 (43%), Positives = 21/37 (56%)
Frame = +3
Query: 387 SRVHPHYLEPLRSSTMRFQRSFLPRTIRLWNELPSTV 497
SR + ++S+ + SF PRTIR WN LPS V
Sbjct: 440 SRTNSSKYNQIQSNVLSHSYSFFPRTIRTWNLLPSEV 476
>SB_33076| Best HMM Match : Put_DNA-bind_N (HMM E-Value=8.4)
Length = 152
Score = 35.1 bits (77), Expect = 0.035
Identities = 16/37 (43%), Positives = 21/37 (56%)
Frame = +3
Query: 387 SRVHPHYLEPLRSSTMRFQRSFLPRTIRLWNELPSTV 497
SR + ++S+ + SF PRTIR WN LPS V
Sbjct: 87 SRTNSSKYNQIQSNVLSHSYSFFPRTIRTWNLLPSEV 123
>SB_30407| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 788
Score = 35.1 bits (77), Expect = 0.035
Identities = 16/37 (43%), Positives = 21/37 (56%)
Frame = +3
Query: 387 SRVHPHYLEPLRSSTMRFQRSFLPRTIRLWNELPSTV 497
SR + ++S+ + SF PRTIR WN LPS V
Sbjct: 544 SRTNSSKYNQIQSNVLSHSYSFFPRTIRTWNLLPSEV 580
>SB_25119| Best HMM Match : Ribosomal_S27 (HMM E-Value=9.4)
Length = 443
Score = 35.1 bits (77), Expect = 0.035
Identities = 15/37 (40%), Positives = 20/37 (54%)
Frame = +3
Query: 387 SRVHPHYLEPLRSSTMRFQRSFLPRTIRLWNELPSTV 497
+R H + L S+ + F SF PR IR WN LP +
Sbjct: 262 TRRHSLSFQQLHSNILSFNYSFFPRAIRAWNLLPDNI 298
>SB_20783| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 295
Score = 35.1 bits (77), Expect = 0.035
Identities = 16/42 (38%), Positives = 25/42 (59%), Gaps = 2/42 (4%)
Frame = +3
Query: 372 TARHRSR-VHPHYLEPLRSSTMRFQR-SFLPRTIRLWNELPS 491
T+R+ +R HP+ + + R S+ PRT++LWN LPS
Sbjct: 225 TSRYNTRSYHPNNYRLFSTHNQNYYRNSYFPRTVKLWNSLPS 266
>SB_18046| Best HMM Match : RVT_1 (HMM E-Value=0.34)
Length = 837
Score = 35.1 bits (77), Expect = 0.035
Identities = 16/37 (43%), Positives = 21/37 (56%)
Frame = +3
Query: 387 SRVHPHYLEPLRSSTMRFQRSFLPRTIRLWNELPSTV 497
SR + ++S+ + SF PRTIR WN LPS V
Sbjct: 772 SRTNSSKYNQIQSNVLSHSYSFFPRTIRTWNLLPSEV 808
>SB_6030| Best HMM Match : rve (HMM E-Value=8.7e-30)
Length = 1280
Score = 34.7 bits (76), Expect = 0.046
Identities = 14/31 (45%), Positives = 20/31 (64%)
Frame = +3
Query: 405 YLEPLRSSTMRFQRSFLPRTIRLWNELPSTV 497
Y L+++T+ F SF R IR+WN LP+ V
Sbjct: 1221 YCNQLQANTLTFNYSFFARAIRIWNLLPNDV 1251
>SB_26110| Best HMM Match : HipA_C (HMM E-Value=5.5)
Length = 210
Score = 34.7 bits (76), Expect = 0.046
Identities = 14/31 (45%), Positives = 20/31 (64%)
Frame = +3
Query: 405 YLEPLRSSTMRFQRSFLPRTIRLWNELPSTV 497
Y L+++T+ F SF R IR+WN LP+ V
Sbjct: 151 YYNQLQANTLAFNYSFFARAIRIWNLLPNDV 181
>SB_25497| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 372
Score = 34.7 bits (76), Expect = 0.046
Identities = 14/31 (45%), Positives = 20/31 (64%)
Frame = +3
Query: 405 YLEPLRSSTMRFQRSFLPRTIRLWNELPSTV 497
Y L+++T+ F SF R IR+WN LP+ V
Sbjct: 305 YYNQLQANTLAFNYSFFARAIRIWNLLPNDV 335
>SB_14729| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 315
Score = 34.7 bits (76), Expect = 0.046
Identities = 14/31 (45%), Positives = 20/31 (64%)
Frame = +3
Query: 405 YLEPLRSSTMRFQRSFLPRTIRLWNELPSTV 497
Y L+++T+ F SF R IR+WN LP+ V
Sbjct: 256 YYNQLQANTLAFNYSFFARAIRIWNLLPNDV 286
>SB_4310| Best HMM Match : RVT_1 (HMM E-Value=5e-28)
Length = 570
Score = 34.7 bits (76), Expect = 0.046
Identities = 14/31 (45%), Positives = 20/31 (64%)
Frame = +3
Query: 405 YLEPLRSSTMRFQRSFLPRTIRLWNELPSTV 497
Y L+++T+ F SF R IR+WN LP+ V
Sbjct: 511 YYNQLQANTLAFNYSFFARAIRIWNLLPNDV 541
>SB_31120| Best HMM Match : Pox_F16 (HMM E-Value=5)
Length = 284
Score = 33.9 bits (74), Expect = 0.080
Identities = 15/37 (40%), Positives = 21/37 (56%)
Frame = +3
Query: 387 SRVHPHYLEPLRSSTMRFQRSFLPRTIRLWNELPSTV 497
SR + ++S+ + SF PRTIR WN LP+ V
Sbjct: 219 SRTNSSKYNQIQSNVLSHSYSFFPRTIRTWNLLPAQV 255
>SB_48112| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 232
Score = 33.5 bits (73), Expect = 0.11
Identities = 14/34 (41%), Positives = 20/34 (58%)
Frame = +3
Query: 396 HPHYLEPLRSSTMRFQRSFLPRTIRLWNELPSTV 497
H + + T ++ SFLPR +RLWN LP +V
Sbjct: 185 HSEFYTIPNARTDIYKYSFLPRALRLWNNLPQSV 218
>SB_32643| Best HMM Match : Carla_C4 (HMM E-Value=9.9)
Length = 159
Score = 33.1 bits (72), Expect = 0.14
Identities = 22/65 (33%), Positives = 38/65 (58%)
Frame = +3
Query: 285 MSSLSLRYKV*VSLDLELTYQSKIRFYHRTARHRSRVHPHYLEPLRSSTMRFQRSFLPRT 464
M LS+ YK+ ++ +++ + + I+ RT+R R Y + L+++ F SF+PRT
Sbjct: 65 MLQLSMFYKIKNNI-VKIPFPTSIQENTRTSR---RTDISYRQ-LQANVNAFGMSFIPRT 119
Query: 465 IRLWN 479
IR WN
Sbjct: 120 IRTWN 124
>SB_30049| Best HMM Match : FBA_2 (HMM E-Value=7)
Length = 282
Score = 33.1 bits (72), Expect = 0.14
Identities = 15/37 (40%), Positives = 21/37 (56%)
Frame = +3
Query: 387 SRVHPHYLEPLRSSTMRFQRSFLPRTIRLWNELPSTV 497
+R H L+S+ + + SF R IR+WN LPS V
Sbjct: 217 TRRQNHSFLQLQSNILSYNYSFFARAIRIWNLLPSNV 253
>SB_22775| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 159
Score = 33.1 bits (72), Expect = 0.14
Identities = 22/65 (33%), Positives = 38/65 (58%)
Frame = +3
Query: 285 MSSLSLRYKV*VSLDLELTYQSKIRFYHRTARHRSRVHPHYLEPLRSSTMRFQRSFLPRT 464
M LS+ +K+ +L +++ + + I+ RT+R R Y + L+++ F SF+PRT
Sbjct: 65 MLQLSMFFKIKNNL-VKIPFPTSIQENTRTSR---RTDISYRQ-LQANVNAFDMSFIPRT 119
Query: 465 IRLWN 479
IR WN
Sbjct: 120 IRTWN 124
>SB_19305| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 159
Score = 33.1 bits (72), Expect = 0.14
Identities = 22/65 (33%), Positives = 38/65 (58%)
Frame = +3
Query: 285 MSSLSLRYKV*VSLDLELTYQSKIRFYHRTARHRSRVHPHYLEPLRSSTMRFQRSFLPRT 464
M LS+ YK+ ++ +++ + + I+ RT+R R Y + L+++ F SF+PRT
Sbjct: 65 MLQLSMFYKIKNNI-VKIPFPTSIQENTRTSR---RTDISYRQ-LQANVNAFGMSFIPRT 119
Query: 465 IRLWN 479
IR WN
Sbjct: 120 IRTWN 124
>SB_24816| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 662
Score = 32.3 bits (70), Expect = 0.24
Identities = 15/35 (42%), Positives = 19/35 (54%), Gaps = 1/35 (2%)
Frame = +3
Query: 396 HPHYLEPLRSSTMRFQRSFLPRTIRLWNELP-STV 497
HP + T F+ SF P IR+WN LP ST+
Sbjct: 616 HPQRFALVSCKTNVFKESFFPHAIRMWNGLPVSTI 650
>SB_19530| Best HMM Match : EMI (HMM E-Value=3.5)
Length = 244
Score = 32.3 bits (70), Expect = 0.24
Identities = 15/35 (42%), Positives = 19/35 (54%), Gaps = 1/35 (2%)
Frame = +3
Query: 396 HPHYLEPLRSSTMRFQRSFLPRTIRLWNELP-STV 497
HP + T F+ SF P IR+WN LP ST+
Sbjct: 198 HPQRFALVSCKTNVFKESFFPHAIRMWNGLPVSTI 232
>SB_40765| Best HMM Match : DX (HMM E-Value=1.4)
Length = 278
Score = 32.3 bits (70), Expect = 0.24
Identities = 20/74 (27%), Positives = 39/74 (52%)
Frame = +3
Query: 270 DIKS*MSSLSLRYKV*VSLDLELTYQSKIRFYHRTARHRSRVHPHYLEPLRSSTMRFQRS 449
+++ M+ L+L YK+ +++ + +R + S +Y E +++ ++ S
Sbjct: 184 ELRRTMARLTLLYKLSRG-QIDIDTSTYLRPHQDLRTRNSHNFKYYQE--KATKNKYFYS 240
Query: 450 FLPRTIRLWNELPS 491
F PRTIR WN LP+
Sbjct: 241 FFPRTIRHWNTLPN 254
>SB_40344| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 401
Score = 31.9 bits (69), Expect = 0.32
Identities = 18/40 (45%), Positives = 22/40 (55%)
Frame = +3
Query: 369 RTARHRSRVHPHYLEPLRSSTMRFQRSFLPRTIRLWNELP 488
RT + RS HP L T F+ SF RTI+ WN+LP
Sbjct: 346 RTRQLRSS-HPDKFIELCPRTEAFKNSFFCRTIKEWNKLP 384
>SB_16492| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 295
Score = 31.9 bits (69), Expect = 0.32
Identities = 10/18 (55%), Positives = 15/18 (83%)
Frame = +3
Query: 438 FQRSFLPRTIRLWNELPS 491
++ S+ PRT++LWN LPS
Sbjct: 249 YRNSYFPRTVKLWNSLPS 266
>SB_58576| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 159
Score = 31.5 bits (68), Expect = 0.43
Identities = 21/65 (32%), Positives = 38/65 (58%)
Frame = +3
Query: 285 MSSLSLRYKV*VSLDLELTYQSKIRFYHRTARHRSRVHPHYLEPLRSSTMRFQRSFLPRT 464
M LS+ +K+ ++ +++ + + I+ RT+R R Y + L+++ F SF+PRT
Sbjct: 65 MLQLSMFFKIKNNI-VKIPFPTSIQENTRTSR---RTDISYRQ-LQANVNAFGMSFIPRT 119
Query: 465 IRLWN 479
IR WN
Sbjct: 120 IRTWN 124
>SB_56220| Best HMM Match : RVT_1 (HMM E-Value=3.7e-16)
Length = 453
Score = 31.5 bits (68), Expect = 0.43
Identities = 21/65 (32%), Positives = 38/65 (58%)
Frame = +3
Query: 285 MSSLSLRYKV*VSLDLELTYQSKIRFYHRTARHRSRVHPHYLEPLRSSTMRFQRSFLPRT 464
M LS+ +K+ ++ +++ + + I+ RT+R R Y + L+++ F SF+PRT
Sbjct: 359 MLQLSMFFKIKNNI-VKIPFPTSIQENTRTSR---RTDISYRQ-LQANVNAFGMSFIPRT 413
Query: 465 IRLWN 479
IR WN
Sbjct: 414 IRTWN 418
>SB_43828| Best HMM Match : XPG_N (HMM E-Value=1.8)
Length = 174
Score = 31.5 bits (68), Expect = 0.43
Identities = 20/74 (27%), Positives = 38/74 (51%)
Frame = +3
Query: 270 DIKS*MSSLSLRYKV*VSLDLELTYQSKIRFYHRTARHRSRVHPHYLEPLRSSTMRFQRS 449
+++ M+ L+L YK+ +++ +R + S +Y E +++ ++ S
Sbjct: 80 ELRRTMARLTLLYKLSRG-QIDIDTSMYLRPHQDLRTRNSHNFKYYQE--KATKNKYFYS 136
Query: 450 FLPRTIRLWNELPS 491
F PRTIR WN LP+
Sbjct: 137 FFPRTIRHWNTLPN 150
>SB_40983| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 159
Score = 31.5 bits (68), Expect = 0.43
Identities = 21/65 (32%), Positives = 38/65 (58%)
Frame = +3
Query: 285 MSSLSLRYKV*VSLDLELTYQSKIRFYHRTARHRSRVHPHYLEPLRSSTMRFQRSFLPRT 464
M LS+ +K+ ++ +++ + + I+ RT+R R Y + L+++ F SF+PRT
Sbjct: 65 MLQLSMFFKIKNNI-VKIPFPTSIQENTRTSR---RTDISYRQ-LQANVNAFGMSFIPRT 119
Query: 465 IRLWN 479
IR WN
Sbjct: 120 IRTWN 124
>SB_40552| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 159
Score = 31.5 bits (68), Expect = 0.43
Identities = 21/65 (32%), Positives = 38/65 (58%)
Frame = +3
Query: 285 MSSLSLRYKV*VSLDLELTYQSKIRFYHRTARHRSRVHPHYLEPLRSSTMRFQRSFLPRT 464
M LS+ +K+ ++ +++ + + I+ RT+R R Y + L+++ F SF+PRT
Sbjct: 65 MLQLSMFFKIKNNI-VKIPFPTSIQENTRTSR---RTDISYRQ-LQANVNAFGMSFIPRT 119
Query: 465 IRLWN 479
IR WN
Sbjct: 120 IRTWN 124
>SB_38731| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 159
Score = 31.5 bits (68), Expect = 0.43
Identities = 21/65 (32%), Positives = 38/65 (58%)
Frame = +3
Query: 285 MSSLSLRYKV*VSLDLELTYQSKIRFYHRTARHRSRVHPHYLEPLRSSTMRFQRSFLPRT 464
M LS+ +K+ ++ +++ + + I+ RT+R R Y + L+++ F SF+PRT
Sbjct: 65 MLQLSMFFKIKNNI-VKIPFPTSIQENTRTSR---RTDISYRQ-LQANVNAFGMSFIPRT 119
Query: 465 IRLWN 479
IR WN
Sbjct: 120 IRTWN 124
>SB_34180| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 159
Score = 31.5 bits (68), Expect = 0.43
Identities = 21/65 (32%), Positives = 38/65 (58%)
Frame = +3
Query: 285 MSSLSLRYKV*VSLDLELTYQSKIRFYHRTARHRSRVHPHYLEPLRSSTMRFQRSFLPRT 464
M LS+ +K+ ++ +++ + + I+ RT+R R Y + L+++ F SF+PRT
Sbjct: 65 MLQLSMFFKIKNNI-VKIPFPTSIQENTRTSR---RTDISYRQ-LQANVNAFGMSFIPRT 119
Query: 465 IRLWN 479
IR WN
Sbjct: 120 IRTWN 124
>SB_34116| Best HMM Match : RVT_1 (HMM E-Value=0)
Length = 522
Score = 31.5 bits (68), Expect = 0.43
Identities = 21/65 (32%), Positives = 38/65 (58%)
Frame = +3
Query: 285 MSSLSLRYKV*VSLDLELTYQSKIRFYHRTARHRSRVHPHYLEPLRSSTMRFQRSFLPRT 464
M LS+ +K+ ++ +++ + + I+ RT+R R Y + L+++ F SF+PRT
Sbjct: 428 MLQLSMFFKIKNNI-VKIPFPTSIQENTRTSR---RTDISYRQ-LQANVNAFGMSFIPRT 482
Query: 465 IRLWN 479
IR WN
Sbjct: 483 IRTWN 487
>SB_30890| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 159
Score = 31.5 bits (68), Expect = 0.43
Identities = 21/65 (32%), Positives = 38/65 (58%)
Frame = +3
Query: 285 MSSLSLRYKV*VSLDLELTYQSKIRFYHRTARHRSRVHPHYLEPLRSSTMRFQRSFLPRT 464
M LS+ +K+ ++ +++ + + I+ RT+R R Y + L+++ F SF+PRT
Sbjct: 65 MLQLSMFFKIKNNI-VKIPFPTSIQENTRTSR---RTDISYRQ-LQANVNAFGMSFIPRT 119
Query: 465 IRLWN 479
IR WN
Sbjct: 120 IRTWN 124
>SB_29924| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 159
Score = 31.5 bits (68), Expect = 0.43
Identities = 21/65 (32%), Positives = 38/65 (58%)
Frame = +3
Query: 285 MSSLSLRYKV*VSLDLELTYQSKIRFYHRTARHRSRVHPHYLEPLRSSTMRFQRSFLPRT 464
M LS+ +K+ ++ +++ + + I+ RT+R R Y + L+++ F SF+PRT
Sbjct: 65 MLQLSMFFKIKNNI-VKIPFPTSIQENTRTSR---RTDISYRQ-LQANVNAFGMSFIPRT 119
Query: 465 IRLWN 479
IR WN
Sbjct: 120 IRTWN 124
>SB_28979| Best HMM Match : RVT_1 (HMM E-Value=1.6e-40)
Length = 892
Score = 31.5 bits (68), Expect = 0.43
Identities = 21/65 (32%), Positives = 38/65 (58%)
Frame = +3
Query: 285 MSSLSLRYKV*VSLDLELTYQSKIRFYHRTARHRSRVHPHYLEPLRSSTMRFQRSFLPRT 464
M LS+ +K+ ++ +++ + + I+ RT+R R Y + L+++ F SF+PRT
Sbjct: 798 MLQLSMFFKIKNNI-VKIPFPTSIQENTRTSR---RTDISYRQ-LQANVNAFGMSFIPRT 852
Query: 465 IRLWN 479
IR WN
Sbjct: 853 IRTWN 857
>SB_26135| Best HMM Match : RVT_1 (HMM E-Value=0.072)
Length = 375
Score = 31.5 bits (68), Expect = 0.43
Identities = 20/74 (27%), Positives = 38/74 (51%)
Frame = +3
Query: 270 DIKS*MSSLSLRYKV*VSLDLELTYQSKIRFYHRTARHRSRVHPHYLEPLRSSTMRFQRS 449
+++ M+ L+L YK+ +++ +R + S +Y E +++ ++ S
Sbjct: 281 ELRRTMARLTLLYKLSRG-QIDIDTNMYLRPHQDLRTRNSHNFKYYQE--KATKNKYFYS 337
Query: 450 FLPRTIRLWNELPS 491
F PRTIR WN LP+
Sbjct: 338 FFPRTIRHWNTLPN 351
>SB_24244| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 159
Score = 31.5 bits (68), Expect = 0.43
Identities = 21/65 (32%), Positives = 38/65 (58%)
Frame = +3
Query: 285 MSSLSLRYKV*VSLDLELTYQSKIRFYHRTARHRSRVHPHYLEPLRSSTMRFQRSFLPRT 464
M LS+ +K+ ++ +++ + + I+ RT+R R Y + L+++ F SF+PRT
Sbjct: 65 MLQLSMFFKIKNNI-VKIPFPTSIQENTRTSR---RTDISYRQ-LQANVNAFGMSFIPRT 119
Query: 465 IRLWN 479
IR WN
Sbjct: 120 IRTWN 124
>SB_22251| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 497
Score = 31.5 bits (68), Expect = 0.43
Identities = 21/65 (32%), Positives = 38/65 (58%)
Frame = +3
Query: 285 MSSLSLRYKV*VSLDLELTYQSKIRFYHRTARHRSRVHPHYLEPLRSSTMRFQRSFLPRT 464
M LS+ +K+ ++ +++ + + I+ RT+R R Y + L+++ F SF+PRT
Sbjct: 403 MLQLSMFFKIKNNI-VKIPFPTSIQENTRTSR---RTDISYRQ-LQANVNAFGMSFIPRT 457
Query: 465 IRLWN 479
IR WN
Sbjct: 458 IRTWN 462
>SB_19117| Best HMM Match : XPG_N (HMM E-Value=1.8)
Length = 361
Score = 31.5 bits (68), Expect = 0.43
Identities = 20/74 (27%), Positives = 38/74 (51%)
Frame = +3
Query: 270 DIKS*MSSLSLRYKV*VSLDLELTYQSKIRFYHRTARHRSRVHPHYLEPLRSSTMRFQRS 449
+++ M+ L+L YK+ +++ +R + S +Y E +++ ++ S
Sbjct: 267 ELRRTMARLTLLYKLSRG-QIDIDTSMYLRPHQDLRTRNSHNFKYYQE--KATKNKYFYS 323
Query: 450 FLPRTIRLWNELPS 491
F PRTIR WN LP+
Sbjct: 324 FFPRTIRHWNTLPN 337
>SB_7946| Best HMM Match : DUF434 (HMM E-Value=7.5)
Length = 294
Score = 31.5 bits (68), Expect = 0.43
Identities = 17/40 (42%), Positives = 23/40 (57%)
Frame = +3
Query: 369 RTARHRSRVHPHYLEPLRSSTMRFQRSFLPRTIRLWNELP 488
RT + RS HP L +T ++ SF RTI+ WN+LP
Sbjct: 237 RTRQLRSS-HPDKFIELCPTTEAYKNSFFCRTIKEWNKLP 275
>SB_2897| Best HMM Match : RVT_1 (HMM E-Value=3e-33)
Length = 609
Score = 31.5 bits (68), Expect = 0.43
Identities = 20/74 (27%), Positives = 38/74 (51%)
Frame = +3
Query: 270 DIKS*MSSLSLRYKV*VSLDLELTYQSKIRFYHRTARHRSRVHPHYLEPLRSSTMRFQRS 449
+++ M+ L+L YK+ +++ +R + S +Y E +++ ++ S
Sbjct: 513 ELRRTMARLTLLYKLSRG-QIDIDTSMYLRPHQDLRTRNSHNFKYYQE--KATKNKYFYS 569
Query: 450 FLPRTIRLWNELPS 491
F PRTIR WN LP+
Sbjct: 570 FFPRTIRHWNTLPN 583
>SB_43541| Best HMM Match : RVT_1 (HMM E-Value=0)
Length = 581
Score = 31.5 bits (68), Expect = 0.43
Identities = 20/74 (27%), Positives = 38/74 (51%)
Frame = +3
Query: 270 DIKS*MSSLSLRYKV*VSLDLELTYQSKIRFYHRTARHRSRVHPHYLEPLRSSTMRFQRS 449
+++ M+ L+L YK+ +++ +R + S +Y E +++ ++ S
Sbjct: 487 ELRRTMARLTLLYKLSRG-QIDIDTNMYLRPHQDLRTRNSHNFKYYQE--KATKNKYFYS 543
Query: 450 FLPRTIRLWNELPS 491
F PRTIR WN LP+
Sbjct: 544 FFPRTIRHWNTLPN 557
>SB_36764| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 159
Score = 31.5 bits (68), Expect = 0.43
Identities = 21/65 (32%), Positives = 38/65 (58%)
Frame = +3
Query: 285 MSSLSLRYKV*VSLDLELTYQSKIRFYHRTARHRSRVHPHYLEPLRSSTMRFQRSFLPRT 464
M LS+ +K+ ++ +++ + + I+ RT+R R Y + L+++ F SF+PRT
Sbjct: 65 MLQLSMFFKIKNNI-VKIPFPTSIQENTRTSR---RTDISYRQ-LQANVNAFGMSFIPRT 119
Query: 465 IRLWN 479
IR WN
Sbjct: 120 IRTWN 124
>SB_36762| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 159
Score = 31.5 bits (68), Expect = 0.43
Identities = 21/65 (32%), Positives = 38/65 (58%)
Frame = +3
Query: 285 MSSLSLRYKV*VSLDLELTYQSKIRFYHRTARHRSRVHPHYLEPLRSSTMRFQRSFLPRT 464
M LS+ +K+ ++ +++ + + I+ RT+R R Y + L+++ F SF+PRT
Sbjct: 65 MLQLSMFFKIKNNI-VKIPFPTSIQENTRTSR---RTDISYRQ-LQANVNAFGMSFIPRT 119
Query: 465 IRLWN 479
IR WN
Sbjct: 120 IRTWN 124
>SB_24298| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 159
Score = 31.5 bits (68), Expect = 0.43
Identities = 21/65 (32%), Positives = 38/65 (58%)
Frame = +3
Query: 285 MSSLSLRYKV*VSLDLELTYQSKIRFYHRTARHRSRVHPHYLEPLRSSTMRFQRSFLPRT 464
M LS+ +K+ ++ +++ + + I+ RT+R R Y + L+++ F SF+PRT
Sbjct: 65 MLQLSMFFKIKNNI-VKIQFPTSIQENTRTSR---RTDISYKQ-LQANVNAFGMSFIPRT 119
Query: 465 IRLWN 479
IR WN
Sbjct: 120 IRTWN 124
>SB_20120| Best HMM Match : RVT_1 (HMM E-Value=0)
Length = 666
Score = 31.5 bits (68), Expect = 0.43
Identities = 20/74 (27%), Positives = 38/74 (51%)
Frame = +3
Query: 270 DIKS*MSSLSLRYKV*VSLDLELTYQSKIRFYHRTARHRSRVHPHYLEPLRSSTMRFQRS 449
+++ M+ L+L YK+ +++ +R + S +Y E +++ ++ S
Sbjct: 572 ELRRTMARLTLLYKLSRG-QIDIDTSMYLRPHQDLRTRNSHNFKYYQE--KATKNKYFYS 628
Query: 450 FLPRTIRLWNELPS 491
F PRTIR WN LP+
Sbjct: 629 FFPRTIRHWNTLPN 642
>SB_14496| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 110
Score = 31.5 bits (68), Expect = 0.43
Identities = 21/65 (32%), Positives = 38/65 (58%)
Frame = +3
Query: 285 MSSLSLRYKV*VSLDLELTYQSKIRFYHRTARHRSRVHPHYLEPLRSSTMRFQRSFLPRT 464
M LS+ +K+ ++ +++ + + I+ RT+R R Y + L+++ F SF+PRT
Sbjct: 16 MLQLSMFFKIKNNI-VKIPFPTSIQENTRTSR---RTDISYRQ-LQANVNAFGMSFIPRT 70
Query: 465 IRLWN 479
IR WN
Sbjct: 71 IRTWN 75
>SB_48902| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 159
Score = 30.3 bits (65), Expect = 0.98
Identities = 20/65 (30%), Positives = 38/65 (58%)
Frame = +3
Query: 285 MSSLSLRYKV*VSLDLELTYQSKIRFYHRTARHRSRVHPHYLEPLRSSTMRFQRSFLPRT 464
M LS+ +K+ ++ +++ + + I+ RT+R + Y + L+++ F SF+PRT
Sbjct: 65 MLQLSMFFKIKNNI-VKIPFPTSIQENTRTSR---KTDISYRQ-LQANVNAFGMSFIPRT 119
Query: 465 IRLWN 479
IR WN
Sbjct: 120 IRTWN 124
>SB_19427| Best HMM Match : RVT_1 (HMM E-Value=7.5e-32)
Length = 698
Score = 30.3 bits (65), Expect = 0.98
Identities = 16/40 (40%), Positives = 24/40 (60%)
Frame = +3
Query: 369 RTARHRSRVHPHYLEPLRSSTMRFQRSFLPRTIRLWNELP 488
RT + RS + ++E L T ++ SF RTI+ WN+LP
Sbjct: 643 RTRQLRSSLPDKFIE-LCPRTEAYKNSFFCRTIKEWNKLP 681
>SB_38808| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 824
Score = 29.5 bits (63), Expect = 1.7
Identities = 20/74 (27%), Positives = 37/74 (50%)
Frame = +3
Query: 270 DIKS*MSSLSLRYKV*VSLDLELTYQSKIRFYHRTARHRSRVHPHYLEPLRSSTMRFQRS 449
+++ M+ L+L YK+ +++ +R + S Y E +++ ++ S
Sbjct: 730 ELRRTMARLTLLYKLSRG-QIDIDTNMYLRPHQDLRTRNSHNFKCYQE--KATKNKYFYS 786
Query: 450 FLPRTIRLWNELPS 491
F PRTIR WN LP+
Sbjct: 787 FFPRTIRHWNTLPN 800
>SB_29800| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 159
Score = 29.5 bits (63), Expect = 1.7
Identities = 19/65 (29%), Positives = 36/65 (55%)
Frame = +3
Query: 285 MSSLSLRYKV*VSLDLELTYQSKIRFYHRTARHRSRVHPHYLEPLRSSTMRFQRSFLPRT 464
M LS+ +K+ ++ +++ + + I+ RT+R + L+++ F SF+PRT
Sbjct: 65 MLQLSMFFKIKNNI-VKIQFPTSIQENTRTSRRTDISNGQ----LQANVNAFGMSFIPRT 119
Query: 465 IRLWN 479
IR WN
Sbjct: 120 IRTWN 124
>SB_33284| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 263
Score = 29.1 bits (62), Expect = 2.3
Identities = 17/50 (34%), Positives = 29/50 (58%)
Frame = +3
Query: 330 LELTYQSKIRFYHRTARHRSRVHPHYLEPLRSSTMRFQRSFLPRTIRLWN 479
+++ + + I+ RT+R R Y + L+++ F SF+PRTIR WN
Sbjct: 183 VKIPFPTSIQENTRTSR---RTDISYRQ-LQANVNAFGMSFIPRTIRTWN 228
>SB_33411| Best HMM Match : 7tm_1 (HMM E-Value=0.03)
Length = 1020
Score = 28.3 bits (60), Expect = 4.0
Identities = 14/44 (31%), Positives = 23/44 (52%)
Frame = +2
Query: 299 LEI*GISLTRLRTNLPIKNSFLPSHRPPPEQSSSTLPGATEVIH 430
+EI G TR+ + L IK+ +P + P +S PG ++H
Sbjct: 928 IEIPGHRNTRVLSTLYIKDIGIPGYYQPCTSKTSEYPGTINLVH 971
Score = 27.1 bits (57), Expect = 9.2
Identities = 11/36 (30%), Positives = 19/36 (52%)
Frame = +2
Query: 323 TRLRTNLPIKNSFLPSHRPPPEQSSSTLPGATEVIH 430
TR+ + L IK+ +P + P +S PG ++H
Sbjct: 794 TRVLSTLYIKDIGIPGYYKPSSSKTSEYPGTINLVH 829
>SB_37654| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 865
Score = 27.9 bits (59), Expect = 5.3
Identities = 12/21 (57%), Positives = 13/21 (61%)
Frame = +3
Query: 438 FQRSFLPRTIRLWNELPSTVF 500
F SF RTI +WN LP VF
Sbjct: 826 FLFSFYSRTIPVWNALPQAVF 846
>SB_41259| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 961
Score = 27.5 bits (58), Expect = 6.9
Identities = 20/62 (32%), Positives = 28/62 (45%), Gaps = 3/62 (4%)
Frame = +2
Query: 317 SLTRLRTN-LPIKNSFLPSHRPPPEQSSST--LPGATEVIHNAFPEVFFATYHPAME*AP 487
S++ LRT P+ P+H+PPP Q S+ PG+ H P F A + P
Sbjct: 805 SVSILRTRRCPVSEP--PTHKPPPPQYSAKRGCPGSEPPPHKPLPPHFSAKRGCPVSYPP 862
Query: 488 LH 493
H
Sbjct: 863 TH 864
>SB_31047| Best HMM Match : CHORD (HMM E-Value=6.2)
Length = 251
Score = 27.5 bits (58), Expect = 6.9
Identities = 13/28 (46%), Positives = 16/28 (57%)
Frame = +3
Query: 405 YLEPLRSSTMRFQRSFLPRTIRLWNELP 488
Y P S+ ++SF P TIR WN LP
Sbjct: 203 YKVPPSSTDYHKKKSFFPPTIRDWNCLP 230
>SB_25515| Best HMM Match : Complex1_LYR (HMM E-Value=9.6)
Length = 304
Score = 27.1 bits (57), Expect = 9.2
Identities = 11/21 (52%), Positives = 14/21 (66%)
Frame = +3
Query: 426 STMRFQRSFLPRTIRLWNELP 488
S +F+ SF RTI +WN LP
Sbjct: 261 SINQFKYSFFSRTIPVWNSLP 281
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,242,561
Number of Sequences: 59808
Number of extensions: 266218
Number of successful extensions: 1077
Number of sequences better than 10.0: 69
Number of HSP's better than 10.0 without gapping: 981
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1075
length of database: 16,821,457
effective HSP length: 77
effective length of database: 12,216,241
effective search space used: 1148326654
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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