Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= epV30475
         (516 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

U20861-11|AAA62291.2| 1714|Caenorhabditis elegans Hypothetical p...    29   1.5  
AL132948-10|CAC51066.1|  366|Caenorhabditis elegans Hypothetical...    29   1.5  
U41624-7|AAF99946.3|  302|Caenorhabditis elegans Hypothetical pr...    29   2.0  
Z74033-2|CAA98476.2|  419|Caenorhabditis elegans Hypothetical pr...    28   4.6  
Z74033-1|CAA98475.2|  460|Caenorhabditis elegans Hypothetical pr...    28   4.6  
U58751-5|AAN84882.1|  781|Caenorhabditis elegans Wasp (actin cyt...    27   8.0  
U23527-5|AAC46572.2|  915|Caenorhabditis elegans Hypothetical pr...    27   8.0  

>U20861-11|AAA62291.2| 1714|Caenorhabditis elegans Hypothetical
            protein C28H8.3 protein.
          Length = 1714

 Score = 29.5 bits (63), Expect = 1.5
 Identities = 14/44 (31%), Positives = 24/44 (54%)
 Frame = -3

Query: 361  KRIFDW*VSSKSSETYTLYLKLSEDIQLLISYNSRPFNTKFIKN 230
            +R  +W +SS   +  ++   L E +   +SY +RPFN + I N
Sbjct: 1086 ERFMEW-LSSDEQKINSILKILKEPVNTQLSYRARPFNKEKIAN 1128


>AL132948-10|CAC51066.1|  366|Caenorhabditis elegans Hypothetical
           protein Y39B6A.11 protein.
          Length = 366

 Score = 29.5 bits (63), Expect = 1.5
 Identities = 15/33 (45%), Positives = 17/33 (51%)
 Frame = +1

Query: 7   PWXTVVPPVASTLDPVLLEVPEEPTSEPRRTSA 105
           P  TVVPPV     PV+   P EP + P  T A
Sbjct: 237 PTQTVVPPVLQEAPPVIAP-PTEPVAPPTSTQA 268


>U41624-7|AAF99946.3|  302|Caenorhabditis elegans Hypothetical
           protein F46C8.8 protein.
          Length = 302

 Score = 29.1 bits (62), Expect = 2.0
 Identities = 12/18 (66%), Positives = 13/18 (72%)
 Frame = +2

Query: 347 IKNSFLPSHRPPPEQSSS 400
           I N F+P  RP PEQSSS
Sbjct: 212 IMNMFVPQERPQPEQSSS 229


>Z74033-2|CAA98476.2|  419|Caenorhabditis elegans Hypothetical
           protein F38B7.1b protein.
          Length = 419

 Score = 27.9 bits (59), Expect = 4.6
 Identities = 11/32 (34%), Positives = 17/32 (53%)
 Frame = +2

Query: 371 HRPPPEQSSSTLPGATEVIHNAFPEVFFATYH 466
           + PP  QS  + P +T V H   P ++ + YH
Sbjct: 221 NEPPSAQSQYSTPISTPVPHQTTPSLYASQYH 252


>Z74033-1|CAA98475.2|  460|Caenorhabditis elegans Hypothetical
           protein F38B7.1a protein.
          Length = 460

 Score = 27.9 bits (59), Expect = 4.6
 Identities = 11/32 (34%), Positives = 17/32 (53%)
 Frame = +2

Query: 371 HRPPPEQSSSTLPGATEVIHNAFPEVFFATYH 466
           + PP  QS  + P +T V H   P ++ + YH
Sbjct: 262 NEPPSAQSQYSTPISTPVPHQTTPSLYASQYH 293


>U58751-5|AAN84882.1|  781|Caenorhabditis elegans Wasp (actin
           cytoskeleton modulator)homolog protein 1, isoform b
           protein.
          Length = 781

 Score = 27.1 bits (57), Expect = 8.0
 Identities = 12/28 (42%), Positives = 17/28 (60%)
 Frame = +2

Query: 338 NLPIKNSFLPSHRPPPEQSSSTLPGATE 421
           NLP+  SF P   PPP  S++T P + +
Sbjct: 19  NLPVAQSFPPPSHPPP-PSATTNPSSNK 45


>U23527-5|AAC46572.2|  915|Caenorhabditis elegans Hypothetical
           protein K09E2.1 protein.
          Length = 915

 Score = 27.1 bits (57), Expect = 8.0
 Identities = 10/19 (52%), Positives = 14/19 (73%)
 Frame = +1

Query: 25  PPVASTLDPVLLEVPEEPT 81
           PP+ STL P+++E  EE T
Sbjct: 703 PPIRSTLRPIIIEEKEEET 721


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 10,563,508
Number of Sequences: 27780
Number of extensions: 200498
Number of successful extensions: 670
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 645
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 670
length of database: 12,740,198
effective HSP length: 77
effective length of database: 10,601,138
effective search space used: 996506972
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)