Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= epV30475
         (516 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY647436-1|AAU81605.1|  567|Apis mellifera juvenile hormone este...    22   3.3  
AY526235-1|AAS20468.1|  169|Apis mellifera esterase protein.           22   3.3  
AB083009-1|BAC54130.1|  567|Apis mellifera esterase protein.           22   3.3  
AM076717-1|CAJ28210.1|  501|Apis mellifera serotonin receptor pr...    21   5.7  
AB167961-1|BAD51404.1|  554|Apis mellifera E74 protein.                21   5.7  
AB022908-1|BAA86909.1|  493|Apis mellifera amylase protein.            21   10.0 

>AY647436-1|AAU81605.1|  567|Apis mellifera juvenile hormone
           esterase protein.
          Length = 567

 Score = 22.2 bits (45), Expect = 3.3
 Identities = 9/35 (25%), Positives = 16/35 (45%)
 Frame = +3

Query: 393 VHPHYLEPLRSSTMRFQRSFLPRTIRLWNELPSTV 497
           VH HYL PL +   +   S     +  W +  +++
Sbjct: 215 VHYHYLSPLSAGLFQGGISISGTALNCWTQTENSL 249


>AY526235-1|AAS20468.1|  169|Apis mellifera esterase protein.
          Length = 169

 Score = 22.2 bits (45), Expect = 3.3
 Identities = 9/35 (25%), Positives = 16/35 (45%)
 Frame = +3

Query: 393 VHPHYLEPLRSSTMRFQRSFLPRTIRLWNELPSTV 497
           VH HYL PL +   +   S     +  W +  +++
Sbjct: 86  VHYHYLSPLSAGLFQGGISISGTALNCWTQTENSL 120


>AB083009-1|BAC54130.1|  567|Apis mellifera esterase protein.
          Length = 567

 Score = 22.2 bits (45), Expect = 3.3
 Identities = 9/35 (25%), Positives = 16/35 (45%)
 Frame = +3

Query: 393 VHPHYLEPLRSSTMRFQRSFLPRTIRLWNELPSTV 497
           VH HYL PL +   +   S     +  W +  +++
Sbjct: 215 VHYHYLSPLSAGLFQGGISISGTALNCWTQTENSL 249


>AM076717-1|CAJ28210.1|  501|Apis mellifera serotonin receptor
           protein.
          Length = 501

 Score = 21.4 bits (43), Expect = 5.7
 Identities = 11/30 (36%), Positives = 15/30 (50%)
 Frame = +1

Query: 40  TLDPVLLEVPEEPTSEPRRTSANTCQ*FFY 129
           +L P+L+   E   SE   +    CQ FFY
Sbjct: 173 SLPPLLIMGNEHTYSETGPSHCVVCQNFFY 202


>AB167961-1|BAD51404.1|  554|Apis mellifera E74 protein.
          Length = 554

 Score = 21.4 bits (43), Expect = 5.7
 Identities = 7/14 (50%), Positives = 8/14 (57%)
 Frame = +3

Query: 363 YHRTARHRSRVHPH 404
           YH    H S+ HPH
Sbjct: 316 YHPHQHHPSQYHPH 329


>AB022908-1|BAA86909.1|  493|Apis mellifera amylase protein.
          Length = 493

 Score = 20.6 bits (41), Expect = 10.0
 Identities = 8/15 (53%), Positives = 10/15 (66%)
 Frame = -1

Query: 303 SS*AKTFNF*YPTTP 259
           +S A T+NF YP  P
Sbjct: 132 NSRANTYNFDYPQVP 146


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 129,880
Number of Sequences: 438
Number of extensions: 2721
Number of successful extensions: 6
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 6
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6
length of database: 146,343
effective HSP length: 54
effective length of database: 122,691
effective search space used: 14354847
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)