Bombyx BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= epV30469
         (516 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_Q6IGD8 Cluster: HDC06590; n=1; Drosophila melanogaster|...    36   0.41 
UniRef50_Q54XM2 Cluster: Putative uncharacterized protein; n=1; ...    34   2.2  
UniRef50_Q73MR3 Cluster: Membrane protein, putative; n=1; Trepon...    33   5.1  
UniRef50_Q247R3 Cluster: Putative uncharacterized protein; n=1; ...    32   6.8  
UniRef50_Q8IDK7 Cluster: Glutamate--tRNA ligase; n=6; Plasmodium...    32   8.9  
UniRef50_Q0UAG3 Cluster: Putative uncharacterized protein; n=1; ...    32   8.9  

>UniRef50_Q6IGD8 Cluster: HDC06590; n=1; Drosophila
           melanogaster|Rep: HDC06590 - Drosophila melanogaster
           (Fruit fly)
          Length = 712

 Score = 36.3 bits (80), Expect = 0.41
 Identities = 17/51 (33%), Positives = 29/51 (56%)
 Frame = -2

Query: 467 NQKCHSFLFSNVNLWLKLEKSFILFKSLYLYHSIRYFLTCYMKFSAKSQNY 315
           N +C  F+FS + LWL L  SFIL  S+  +  ++Y   C+ K  + + ++
Sbjct: 492 NGEC--FIFSGLRLWLSLVHSFILLPSVSAFCLMKYDCVCFAKVDSMACSF 540


>UniRef50_Q54XM2 Cluster: Putative uncharacterized protein; n=1;
           Dictyostelium discoideum AX4|Rep: Putative
           uncharacterized protein - Dictyostelium discoideum AX4
          Length = 1057

 Score = 33.9 bits (74), Expect = 2.2
 Identities = 22/55 (40%), Positives = 33/55 (60%), Gaps = 1/55 (1%)
 Frame = +1

Query: 289 NISTILSYK*FCDFA-ENFI*QVKKYLML*YK*RDLNNINDFSNLSQRLTLLNKN 450
           NI  I+SY    DF+ EN I ++K+  ++  K   L+N+NDFSN    + +LN N
Sbjct: 72  NIREIISYLQSLDFSKENQIEKIKELNLINLKFEKLSNLNDFSNF--LIPILNLN 124


>UniRef50_Q73MR3 Cluster: Membrane protein, putative; n=1; Treponema
           denticola|Rep: Membrane protein, putative - Treponema
           denticola
          Length = 282

 Score = 32.7 bits (71), Expect = 5.1
 Identities = 22/63 (34%), Positives = 34/63 (53%)
 Frame = -1

Query: 234 FCYFILSLFIQVSFL*LPLKICFISKVAKLKFXKFLSAGKCHTNYLYLRLP*LACINFFF 55
           F  F +S  I +S   +P+   +IS+     F   + AG  +  YL+L    LAC+N+FF
Sbjct: 170 FFIFFISFLICLS---MPINNFYISRY----FLSDIKAGHSYI-YLFLIAALLACVNYFF 221

Query: 54  LYI 46
           +YI
Sbjct: 222 VYI 224


>UniRef50_Q247R3 Cluster: Putative uncharacterized protein; n=1;
           Tetrahymena thermophila SB210|Rep: Putative
           uncharacterized protein - Tetrahymena thermophila SB210
          Length = 875

 Score = 32.3 bits (70), Expect = 6.8
 Identities = 29/94 (30%), Positives = 44/94 (46%), Gaps = 7/94 (7%)
 Frame = -2

Query: 488 KYHVQCTNQKCHSFLFSNVNLWLKLEKSFILFKSLYLYHSIRYF---LTCYMKFSAKSQN 318
           KYH Q  N   H   + N   +L  E  F+L K + L  + +YF   LTC+ KF    Q 
Sbjct: 637 KYHSQ-NNLLLHGLGYKNQKQFLSREFEFLLKKQVTLSMTFKYFLYKLTCH-KFFKTEQV 694

Query: 317 YL*DK----MVLMLGLTNV*HQIKTHSHCENVFV 228
            L DK    M   L + N+ +++K     + +F+
Sbjct: 695 LLLDKANKQMKQDLDILNIMNRLKEIEKFKKLFL 728


>UniRef50_Q8IDK7 Cluster: Glutamate--tRNA ligase; n=6;
           Plasmodium|Rep: Glutamate--tRNA ligase - Plasmodium
           falciparum (isolate 3D7)
          Length = 863

 Score = 31.9 bits (69), Expect = 8.9
 Identities = 15/40 (37%), Positives = 22/40 (55%), Gaps = 1/40 (2%)
 Frame = -2

Query: 506 VTMQFFKY-HVQCTNQKCHSFLFSNVNLWLKLEKSFILFK 390
           +  Q +KY HV  T    +S ++ N+N W KL  S I F+
Sbjct: 210 IYFQMYKYFHVSSTQYAKYSKMYKNINRWHKLIDSLIYFE 249


>UniRef50_Q0UAG3 Cluster: Putative uncharacterized protein; n=1;
           Phaeosphaeria nodorum|Rep: Putative uncharacterized
           protein - Phaeosphaeria nodorum (Septoria nodorum)
          Length = 467

 Score = 31.9 bits (69), Expect = 8.9
 Identities = 13/35 (37%), Positives = 21/35 (60%)
 Frame = -3

Query: 121 REVSHKLFIS*IAITCLHQFFFFIYLLSCCESIFE 17
           RE S+ LF+  + + CL Q+F F Y+ S   ++ E
Sbjct: 273 REASYSLFLLAVFLICLGQYFAFYYISSFATNVLE 307


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 397,533,733
Number of Sequences: 1657284
Number of extensions: 6390639
Number of successful extensions: 14327
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 13850
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 14318
length of database: 575,637,011
effective HSP length: 95
effective length of database: 418,195,031
effective search space used: 31782822356
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)