Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= epV30469
         (516 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292340-1|CAL23152.1|  355|Tribolium castaneum gustatory recept...    23   1.2  
AM292356-1|CAL23168.2|  251|Tribolium castaneum gustatory recept...    22   3.7  
EF592538-1|ABQ95984.1|  582|Tribolium castaneum beta-N-acetylglu...    21   6.5  
AM292343-1|CAL23155.2|  301|Tribolium castaneum gustatory recept...    21   6.5  

>AM292340-1|CAL23152.1|  355|Tribolium castaneum gustatory receptor
           candidate 19 protein.
          Length = 355

 Score = 23.4 bits (48), Expect = 1.2
 Identities = 7/22 (31%), Positives = 16/22 (72%)
 Frame = -3

Query: 88  IAITCLHQFFFFIYLLSCCESI 23
           + + C++ +F++++LL CC  I
Sbjct: 253 LLLVCIY-YFYYMHLLFCCAFI 273


>AM292356-1|CAL23168.2|  251|Tribolium castaneum gustatory receptor
           candidate 35 protein.
          Length = 251

 Score = 21.8 bits (44), Expect = 3.7
 Identities = 7/18 (38%), Positives = 13/18 (72%)
 Frame = -2

Query: 425 WLKLEKSFILFKSLYLYH 372
           ++ +  +FI+F SL +YH
Sbjct: 7   YITISMAFIIFVSLEIYH 24


>EF592538-1|ABQ95984.1|  582|Tribolium castaneum
           beta-N-acetylglucosaminidase NAG3 protein.
          Length = 582

 Score = 21.0 bits (42), Expect = 6.5
 Identities = 7/15 (46%), Positives = 10/15 (66%)
 Frame = -2

Query: 488 KYHVQCTNQKCHSFL 444
           +Y  +C NQKC  +L
Sbjct: 43  RYTWKCENQKCVKYL 57


>AM292343-1|CAL23155.2|  301|Tribolium castaneum gustatory receptor
           candidate 22 protein.
          Length = 301

 Score = 21.0 bits (42), Expect = 6.5
 Identities = 13/39 (33%), Positives = 20/39 (51%)
 Frame = -3

Query: 472 VQTKNAIHFCSVMLTFGSNWRNHLYCLNLSIYIIALDIF 356
           V+  N I    V++    N+   +  L+ SIYII  D+F
Sbjct: 147 VREINGIFAFQVLMCTSMNFVLLIGDLHTSIYIIFFDMF 185


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 104,475
Number of Sequences: 336
Number of extensions: 1963
Number of successful extensions: 4
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 4
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4
length of database: 122,585
effective HSP length: 53
effective length of database: 104,777
effective search space used: 12363686
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)