Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= epV30465
         (516 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ011227-1|AAY63896.1|  484|Apis mellifera Amt-1-like protein pr...    23   1.4  
AY273778-1|AAP33487.1|  427|Apis mellifera ultraspiracle protein...    21   5.7  
AF263459-1|AAF73057.1|  427|Apis mellifera ultraspiracle protein...    21   5.7  
AF388659-3|AAK71993.1|  548|Apis mellifera 1D-myo-inositol-trisp...    21   7.5  
AM050259-1|CAJ18340.1|  683|Apis mellifera putative H3K9 methylt...    21   10.0 
AB264334-1|BAF44089.1|   30|Apis mellifera ecdysone-induced prot...    21   10.0 
AB264313-1|BAF43600.1|  900|Apis mellifera ecdysone-induced prot...    21   10.0 
AB201717-1|BAD90662.1|  107|Apis mellifera apime-corazonin prepr...    21   10.0 

>DQ011227-1|AAY63896.1|  484|Apis mellifera Amt-1-like protein
           protein.
          Length = 484

 Score = 23.4 bits (48), Expect = 1.4
 Identities = 7/10 (70%), Positives = 10/10 (100%)
 Frame = +1

Query: 289 YPMNTTNGKR 318
           YP+NTTNG++
Sbjct: 363 YPLNTTNGRK 372


>AY273778-1|AAP33487.1|  427|Apis mellifera ultraspiracle protein
           protein.
          Length = 427

 Score = 21.4 bits (43), Expect = 5.7
 Identities = 9/18 (50%), Positives = 10/18 (55%)
 Frame = -2

Query: 155 LAGDVRSGSCYNV*SCNG 102
           + GD  SG  Y V SC G
Sbjct: 112 ICGDRASGKHYGVYSCEG 129


>AF263459-1|AAF73057.1|  427|Apis mellifera ultraspiracle protein
           protein.
          Length = 427

 Score = 21.4 bits (43), Expect = 5.7
 Identities = 9/18 (50%), Positives = 10/18 (55%)
 Frame = -2

Query: 155 LAGDVRSGSCYNV*SCNG 102
           + GD  SG  Y V SC G
Sbjct: 112 ICGDRASGKHYGVYSCEG 129


>AF388659-3|AAK71993.1|  548|Apis mellifera
           1D-myo-inositol-trisphosphate 3-kinaseisoform C protein.
          Length = 548

 Score = 21.0 bits (42), Expect = 7.5
 Identities = 7/9 (77%), Positives = 8/9 (88%)
 Frame = +2

Query: 83  DKSKNNIHC 109
           +KSKNN HC
Sbjct: 60  EKSKNNHHC 68


>AM050259-1|CAJ18340.1|  683|Apis mellifera putative H3K9
           methyltransferase protein.
          Length = 683

 Score = 20.6 bits (41), Expect = 10.0
 Identities = 8/14 (57%), Positives = 12/14 (85%)
 Frame = -3

Query: 361 LKKVIKYDIYEVLL 320
           L+KVIK+DI  +L+
Sbjct: 357 LEKVIKHDILRMLI 370


>AB264334-1|BAF44089.1|   30|Apis mellifera ecdysone-induced protein
           75 protein.
          Length = 30

 Score = 20.6 bits (41), Expect = 10.0
 Identities = 9/18 (50%), Positives = 10/18 (55%)
 Frame = -2

Query: 155 LAGDVRSGSCYNV*SCNG 102
           + GD  SG  Y V SC G
Sbjct: 11  VCGDKASGFHYGVHSCEG 28


>AB264313-1|BAF43600.1|  900|Apis mellifera ecdysone-induced protein
           75 protein.
          Length = 900

 Score = 20.6 bits (41), Expect = 10.0
 Identities = 9/18 (50%), Positives = 10/18 (55%)
 Frame = -2

Query: 155 LAGDVRSGSCYNV*SCNG 102
           + GD  SG  Y V SC G
Sbjct: 69  VCGDKASGFHYGVHSCEG 86


>AB201717-1|BAD90662.1|  107|Apis mellifera apime-corazonin
           preprohormone protein.
          Length = 107

 Score = 20.6 bits (41), Expect = 10.0
 Identities = 9/18 (50%), Positives = 10/18 (55%)
 Frame = +1

Query: 283 FTYPMNTTNGKRLVVLHK 336
           FTY    TNGKR   L +
Sbjct: 24  FTYSHGWTNGKRSTSLEE 41


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 118,455
Number of Sequences: 438
Number of extensions: 2216
Number of successful extensions: 8
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 8
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 8
length of database: 146,343
effective HSP length: 54
effective length of database: 122,691
effective search space used: 14354847
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)