Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= epV30463
         (516 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

02_02_0558 + 11477433-11477525,11477632-11477973,11481854-114823...    30   1.3  
12_01_0956 + 9528051-9528254,9528752-9528832,9528844-9529047           29   1.7  
04_04_1407 - 33345230-33345372,33345492-33345626,33346559-33346904     28   3.9  
08_01_0245 + 2023442-2023786,2024485-2024841,2024951-2025393,202...    28   5.1  
01_06_1311 - 36181961-36182519,36182547-36182605                       27   6.8  
10_01_0152 - 1754113-1754286,1754396-1754551,1755273-1756194,175...    27   8.9  
07_03_0662 + 20431448-20432767                                         27   8.9  
06_03_0176 - 17575155-17575761,17575935-17575972                       27   8.9  
01_07_0265 + 42404297-42404479,42404544-42404723,42404811-42405440     27   8.9  

>02_02_0558 +
           11477433-11477525,11477632-11477973,11481854-11482381,
           11482459-11482956
          Length = 486

 Score = 29.9 bits (64), Expect = 1.3
 Identities = 21/61 (34%), Positives = 29/61 (47%), Gaps = 1/61 (1%)
 Frame = +1

Query: 70  ASALQVHLQRDDAAALRGGGPRP-DRATSCRGAVLVLVLEHEPALGGQRPASAQLVQQHG 246
           A+  +V     DAA  +GGG    +   +   A  VL+LEH PA GG  P++       G
Sbjct: 16  AAVRKVFRPSKDAADKKGGGGGDREEEAAAEAAPEVLLLEHFPA-GGTSPSAEGTGNDQG 74

Query: 247 G 249
           G
Sbjct: 75  G 75


>12_01_0956 + 9528051-9528254,9528752-9528832,9528844-9529047
          Length = 162

 Score = 29.5 bits (63), Expect = 1.7
 Identities = 20/48 (41%), Positives = 25/48 (52%)
 Frame = +1

Query: 109 AALRGGGPRPDRATSCRGAVLVLVLEHEPALGGQRPASAQLVQQHGGA 252
           A + G     + ATSC G V V V E E +LGG   + A+ V   GGA
Sbjct: 8   AGVSGLAAAHELATSCAGGVDVTVYEKEDSLGG---SFARTVGVDGGA 52


>04_04_1407 - 33345230-33345372,33345492-33345626,33346559-33346904
          Length = 207

 Score = 28.3 bits (60), Expect = 3.9
 Identities = 19/51 (37%), Positives = 23/51 (45%), Gaps = 2/51 (3%)
 Frame = +1

Query: 130 PRPDRATSCRGA--VLVLVLEHEPALGGQRPASAQLVQQHGGAPHRQRPRG 276
           PR   A S R +  +LV V   EP LGG     A      GG    ++PRG
Sbjct: 32  PRAPAALSLRPSARLLVAVAASEPELGGSGGGGAGDGSGSGGGGDSEKPRG 82


>08_01_0245 +
           2023442-2023786,2024485-2024841,2024951-2025393,
           2025475-2025569,2026302-2026477
          Length = 471

 Score = 27.9 bits (59), Expect = 5.1
 Identities = 21/61 (34%), Positives = 26/61 (42%)
 Frame = +1

Query: 70  ASALQVHLQRDDAAALRGGGPRPDRATSCRGAVLVLVLEHEPALGGQRPASAQLVQQHGG 249
           A+A  +   R  A ALR GG R   A   RGA  V+     PA     PA     + +G 
Sbjct: 11  AAAASISASRVGAGALRAGGLRV--AAGRRGAGAVVAAAMRPAKAVASPAKEAAGEVNGA 68

Query: 250 A 252
           A
Sbjct: 69  A 69


>01_06_1311 - 36181961-36182519,36182547-36182605
          Length = 205

 Score = 27.5 bits (58), Expect = 6.8
 Identities = 12/19 (63%), Positives = 14/19 (73%)
 Frame = -2

Query: 146 ARSGRGPPPRSAAASSRCR 90
           A SG GPPP S AA++R R
Sbjct: 80  AASGAGPPPSSPAAAARKR 98


>10_01_0152 -
           1754113-1754286,1754396-1754551,1755273-1756194,
           1756364-1756414,1757540-1757946,1758918-1759067,
           1759178-1759333,1760175-1761041
          Length = 960

 Score = 27.1 bits (57), Expect = 8.9
 Identities = 17/42 (40%), Positives = 21/42 (50%)
 Frame = +1

Query: 88  HLQRDDAAALRGGGPRPDRATSCRGAVLVLVLEHEPALGGQR 213
           HL  DDAA +R G    D     RG+V   V    P +GG+R
Sbjct: 412 HLLEDDAAVVRAG----DDGVFVRGSVHEGVTAVAPVVGGRR 449


>07_03_0662 + 20431448-20432767
          Length = 439

 Score = 27.1 bits (57), Expect = 8.9
 Identities = 10/22 (45%), Positives = 13/22 (59%)
 Frame = -3

Query: 70  RRVEVTLVYHG*CSCYRSGFTR 5
           RR+ + L +HG C C  S F R
Sbjct: 88  RRLPIVLYFHGGCFCTESAFCR 109


>06_03_0176 - 17575155-17575761,17575935-17575972
          Length = 214

 Score = 27.1 bits (57), Expect = 8.9
 Identities = 10/27 (37%), Positives = 14/27 (51%)
 Frame = -2

Query: 389 KSSGGKWCRRAGGRCWWTSRSSLRDRR 309
           +  GG+  RR     WW+SR +   RR
Sbjct: 80  RGRGGRGARRGPATRWWSSRRATTSRR 106


>01_07_0265 + 42404297-42404479,42404544-42404723,42404811-42405440
          Length = 330

 Score = 27.1 bits (57), Expect = 8.9
 Identities = 16/31 (51%), Positives = 21/31 (67%)
 Frame = +1

Query: 91  LQRDDAAALRGGGPRPDRATSCRGAVLVLVL 183
           L+ + AAALRGG  RP  A+S   AV++L L
Sbjct: 259 LREEAAAALRGGSGRP--ASSSSDAVVLLSL 287


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 10,119,376
Number of Sequences: 37544
Number of extensions: 188911
Number of successful extensions: 827
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 806
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 824
length of database: 14,793,348
effective HSP length: 77
effective length of database: 11,902,460
effective search space used: 1118831240
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)