Bombyx BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= epV30461
         (516 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_P35416 Cluster: Paramyosin, short form; n=2; Drosophila...    54   2e-06
UniRef50_P35415 Cluster: Paramyosin, long form; n=15; Arthropoda...    54   2e-06
UniRef50_A1WQI9 Cluster: L-carnitine dehydratase/bile acid-induc...    35   0.96 
UniRef50_A0UEU5 Cluster: Major facilitator superfamily MFS_1; n=...    33   2.9  
UniRef50_A4BAB4 Cluster: Putative uncharacterized protein; n=1; ...    33   3.9  
UniRef50_Q9RV04 Cluster: Putative uncharacterized protein; n=2; ...    32   6.8  
UniRef50_Q0RCT4 Cluster: Putative uncharacterized protein; n=1; ...    32   6.8  

>UniRef50_P35416 Cluster: Paramyosin, short form; n=2; Drosophila
           melanogaster|Rep: Paramyosin, short form - Drosophila
           melanogaster (Fruit fly)
          Length = 640

 Score = 54.0 bits (124), Expect = 2e-06
 Identities = 23/34 (67%), Positives = 31/34 (91%)
 Frame = -3

Query: 514 SNLSLIRAKHRTFVTTSTVPGSQVYLVQESRALS 413
           S+L++IRAKHRTFVTTSTVPGSQVY+ + +R ++
Sbjct: 606 SSLNIIRAKHRTFVTTSTVPGSQVYIQETTRTIT 639


>UniRef50_P35415 Cluster: Paramyosin, long form; n=15;
           Arthropoda|Rep: Paramyosin, long form - Drosophila
           melanogaster (Fruit fly)
          Length = 879

 Score = 54.0 bits (124), Expect = 2e-06
 Identities = 23/34 (67%), Positives = 31/34 (91%)
 Frame = -3

Query: 514 SNLSLIRAKHRTFVTTSTVPGSQVYLVQESRALS 413
           S+L++IRAKHRTFVTTSTVPGSQVY+ + +R ++
Sbjct: 845 SSLNIIRAKHRTFVTTSTVPGSQVYIQETTRTIT 878


>UniRef50_A1WQI9 Cluster: L-carnitine dehydratase/bile
           acid-inducible protein F; n=1; Verminephrobacter
           eiseniae EF01-2|Rep: L-carnitine dehydratase/bile
           acid-inducible protein F - Verminephrobacter eiseniae
           (strain EF01-2)
          Length = 402

 Score = 35.1 bits (77), Expect = 0.96
 Identities = 18/46 (39%), Positives = 27/46 (58%), Gaps = 2/46 (4%)
 Frame = -2

Query: 446 GLSGPGVPRPQQ*ALVNTLTNIATAKQAPHAHPATA--FLSSVNKG 315
           G SGP   RP   A+  T++ +A A +AP   PATA  +++ V+ G
Sbjct: 131 GQSGPDAQRPGTDAIAQTVSGLAVANRAPDGTPATAKPYIADVSCG 176


>UniRef50_A0UEU5 Cluster: Major facilitator superfamily MFS_1; n=15;
           Proteobacteria|Rep: Major facilitator superfamily MFS_1
           - Burkholderia multivorans ATCC 17616
          Length = 715

 Score = 33.5 bits (73), Expect = 2.9
 Identities = 18/39 (46%), Positives = 23/39 (58%)
 Frame = -2

Query: 407 ALVNTLTNIATAKQAPHAHPATAFLSSVNKGA*FRSGIS 291
           A++N L  IAT   A   HPA AF+S V  GA F S ++
Sbjct: 603 AVLNALLGIATLMPALIVHPAAAFVSGVLFGATFLSAVA 641


>UniRef50_A4BAB4 Cluster: Putative uncharacterized protein; n=1;
           Reinekea sp. MED297|Rep: Putative uncharacterized
           protein - Reinekea sp. MED297
          Length = 633

 Score = 33.1 bits (72), Expect = 3.9
 Identities = 19/57 (33%), Positives = 29/57 (50%), Gaps = 1/57 (1%)
 Frame = +3

Query: 129 RSAFGQCGD-TATLGRAVAPSARPYSEHKTTDGVIEPERIVAPSINTFNHLTND*AY 296
           R+ +G C D TA L   +A      +    +    +P+R+V PS+N FNH+    AY
Sbjct: 312 RNRYGDCKDKTALLQALLALEGVEATPVLVSTNRTDPDRLVLPSLNYFNHIVLCLAY 368


>UniRef50_Q9RV04 Cluster: Putative uncharacterized protein; n=2;
           Deinococcus|Rep: Putative uncharacterized protein -
           Deinococcus radiodurans
          Length = 363

 Score = 32.3 bits (70), Expect = 6.8
 Identities = 30/95 (31%), Positives = 42/95 (44%), Gaps = 2/95 (2%)
 Frame = -2

Query: 509 PLPHPRQAPHFRHHLHCPRLPGLSGPGVPRPQQ*ALVNTLTNIATAKQA-PH-AHPATAF 336
           PLP PR  P    HLH PR+ GL+    P     A   +  ++A A Q  P  A     F
Sbjct: 252 PLPVPRDTPTAELHLHSPRVVGLAARS-PLTAYRAYARSWADVAHALQTRPELADAQVIF 310

Query: 335 LSSVNKGA*FRSGISLVVR*VIKCIDRWRYYSFGF 231
             S+  G   ++G +LV    ++     R+Y  GF
Sbjct: 311 GVSLFFGPMEKAGFTLVELPPLQA----RWYGLGF 341


>UniRef50_Q0RCT4 Cluster: Putative uncharacterized protein; n=1;
           Frankia alni ACN14a|Rep: Putative uncharacterized
           protein - Frankia alni (strain ACN14a)
          Length = 584

 Score = 32.3 bits (70), Expect = 6.8
 Identities = 15/28 (53%), Positives = 15/28 (53%)
 Frame = -2

Query: 506 LPHPRQAPHFRHHLHCPRLPGLSGPGVP 423
           LP PRQA H   H   PR PG   PG P
Sbjct: 479 LPDPRQADHSGPHQTDPRQPGARPPGSP 506


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 484,417,248
Number of Sequences: 1657284
Number of extensions: 8960683
Number of successful extensions: 25263
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 24109
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 25213
length of database: 575,637,011
effective HSP length: 95
effective length of database: 418,195,031
effective search space used: 31782822356
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)