Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= epV30461
         (516 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BC006340-1|AAH06340.1|  362|Homo sapiens ZCCHC2 protein protein.       31   3.2  
Y18198-1|CAB38253.1|  485|Homo sapiens ONECUT-2 transcription fa...    30   4.2  
BC108926-1|AAI08927.1|  399|Homo sapiens ONECUT2 protein protein.      30   4.2  
BC108925-1|AAI08926.1|  399|Homo sapiens ONECUT2 protein protein.      30   4.2  
BC045536-1|AAH45536.1|  487|Homo sapiens TTC31 protein protein.        30   5.5  
BC036017-1|AAH36017.1|  519|Homo sapiens tetratricopeptide repea...    30   5.5  
AY344639-1|AAQ76877.1|  408|Homo sapiens FOXD4-like 1 protein.         29   7.3  
AL078621-1|CAB81641.1|  408|Homo sapiens forkhead box D4-like 1 ...    29   7.3  
AF452723-1|AAN64908.1|  408|Homo sapiens forkhead box D4 like 1 ...    29   7.3  
L41162-1|AAC41947.1|  684|Homo sapiens alpha-3 type IX collagen ...    29   9.7  
BC039297-1|AAH39297.1| 1204|Homo sapiens fibronectin type III do...    29   9.7  
BC011705-1|AAH11705.1|  684|Homo sapiens collagen, type IX, alph...    29   9.7  
AY358367-1|AAQ88733.1|  625|Homo sapiens YVTM2421 protein.             29   9.7  
AL035669-11|CAI95767.2|  191|Homo sapiens collagen type IX alpha...    29   9.7  
AL035669-10|CAC12750.1|  684|Homo sapiens collagen type IX alpha...    29   9.7  
AK223599-1|BAD97319.1| 1204|Homo sapiens factor for adipocyte di...    29   9.7  
AF026802-1|AAD47357.1|  684|Homo sapiens alpha-3 type IX collage...    29   9.7  
AB098597-1|BAC53727.1| 1204|Homo sapiens FAD104 protein.               29   9.7  

>BC006340-1|AAH06340.1|  362|Homo sapiens ZCCHC2 protein protein.
          Length = 362

 Score = 30.7 bits (66), Expect = 3.2
 Identities = 15/30 (50%), Positives = 15/30 (50%)
 Frame = -2

Query: 509 PLPHPRQAPHFRHHLHCPRLPGLSGPGVPR 420
           PLPHP   PH   H H P    L  P VPR
Sbjct: 293 PLPHP--TPHPGRHSHPPSQNALEVPSVPR 320


>Y18198-1|CAB38253.1|  485|Homo sapiens ONECUT-2 transcription
           factor (OC-2) protein.
          Length = 485

 Score = 30.3 bits (65), Expect = 4.2
 Identities = 11/20 (55%), Positives = 11/20 (55%)
 Frame = -2

Query: 503 PHPRQAPHFRHHLHCPRLPG 444
           PHP   PH  HH H  RL G
Sbjct: 151 PHPHHHPHHHHHHHHQRLSG 170


>BC108926-1|AAI08927.1|  399|Homo sapiens ONECUT2 protein protein.
          Length = 399

 Score = 30.3 bits (65), Expect = 4.2
 Identities = 11/20 (55%), Positives = 11/20 (55%)
 Frame = -2

Query: 503 PHPRQAPHFRHHLHCPRLPG 444
           PHP   PH  HH H  RL G
Sbjct: 65  PHPHHHPHHHHHHHHQRLSG 84


>BC108925-1|AAI08926.1|  399|Homo sapiens ONECUT2 protein protein.
          Length = 399

 Score = 30.3 bits (65), Expect = 4.2
 Identities = 11/20 (55%), Positives = 11/20 (55%)
 Frame = -2

Query: 503 PHPRQAPHFRHHLHCPRLPG 444
           PHP   PH  HH H  RL G
Sbjct: 65  PHPHHHPHHHHHHHHQRLSG 84


>BC045536-1|AAH45536.1|  487|Homo sapiens TTC31 protein protein.
          Length = 487

 Score = 29.9 bits (64), Expect = 5.5
 Identities = 13/28 (46%), Positives = 14/28 (50%)
 Frame = -2

Query: 509 PLPHPRQAPHFRHHLHCPRLPGLSGPGV 426
           PLPH   AP     L CPR   L  PG+
Sbjct: 408 PLPHAELAPSGLPSLRCPRSTALRSPGL 435


>BC036017-1|AAH36017.1|  519|Homo sapiens tetratricopeptide repeat
           domain 31 protein.
          Length = 519

 Score = 29.9 bits (64), Expect = 5.5
 Identities = 13/28 (46%), Positives = 14/28 (50%)
 Frame = -2

Query: 509 PLPHPRQAPHFRHHLHCPRLPGLSGPGV 426
           PLPH   AP     L CPR   L  PG+
Sbjct: 440 PLPHAELAPSGLPSLRCPRSTALRSPGL 467


>AY344639-1|AAQ76877.1|  408|Homo sapiens FOXD4-like 1 protein.
          Length = 408

 Score = 29.5 bits (63), Expect = 7.3
 Identities = 22/61 (36%), Positives = 24/61 (39%), Gaps = 1/61 (1%)
 Frame = -2

Query: 506 LPHPRQAPHFRHHLHCPRL-PGLSGPGVPRPQQ*ALVNTLTNIATAKQAPHAHPATAFLS 330
           LPHP   P     LH PR  P L  P +P+P   A  NT           H HP    L 
Sbjct: 214 LPHPFPLPAAHAALHNPRPGPLLGAPALPQPVPGAYPNTAPG-RRPYALLHPHPPRYLLL 272

Query: 329 S 327
           S
Sbjct: 273 S 273


>AL078621-1|CAB81641.1|  408|Homo sapiens forkhead box D4-like 1
           protein.
          Length = 408

 Score = 29.5 bits (63), Expect = 7.3
 Identities = 22/61 (36%), Positives = 24/61 (39%), Gaps = 1/61 (1%)
 Frame = -2

Query: 506 LPHPRQAPHFRHHLHCPRL-PGLSGPGVPRPQQ*ALVNTLTNIATAKQAPHAHPATAFLS 330
           LPHP   P     LH PR  P L  P +P+P   A  NT           H HP    L 
Sbjct: 214 LPHPFPLPAAHAALHNPRPGPLLGAPALPQPVPGAYPNTAPG-RRPYALLHPHPPRYLLL 272

Query: 329 S 327
           S
Sbjct: 273 S 273


>AF452723-1|AAN64908.1|  408|Homo sapiens forkhead box D4 like 1
           protein protein.
          Length = 408

 Score = 29.5 bits (63), Expect = 7.3
 Identities = 22/61 (36%), Positives = 24/61 (39%), Gaps = 1/61 (1%)
 Frame = -2

Query: 506 LPHPRQAPHFRHHLHCPRL-PGLSGPGVPRPQQ*ALVNTLTNIATAKQAPHAHPATAFLS 330
           LPHP   P     LH PR  P L  P +P+P   A  NT           H HP    L 
Sbjct: 214 LPHPFPLPAAHAALHNPRPGPLLGAPALPQPVPGAYPNTAPG-RRPYALLHPHPPRYLLL 272

Query: 329 S 327
           S
Sbjct: 273 S 273


>L41162-1|AAC41947.1|  684|Homo sapiens alpha-3 type IX collagen
           protein.
          Length = 684

 Score = 29.1 bits (62), Expect = 9.7
 Identities = 14/29 (48%), Positives = 16/29 (55%)
 Frame = -2

Query: 503 PHPRQAPHFRHHLHCPRLPGLSGPGVPRP 417
           P P+ AP  R  L  P  PGL G G+P P
Sbjct: 94  PGPKGAPGERGSLGPPGPPGLGGKGLPGP 122


>BC039297-1|AAH39297.1| 1204|Homo sapiens fibronectin type III
           domain containing 3B protein.
          Length = 1204

 Score = 29.1 bits (62), Expect = 9.7
 Identities = 12/30 (40%), Positives = 16/30 (53%)
 Frame = -2

Query: 503 PHPRQAPHFRHHLHCPRLPGLSGPGVPRPQ 414
           P+    PHF H+ H    P ++GPG   PQ
Sbjct: 125 PYLTHHPHFIHNSHTAYYPPVTGPGDMPPQ 154


>BC011705-1|AAH11705.1|  684|Homo sapiens collagen, type IX, alpha 3
           protein.
          Length = 684

 Score = 29.1 bits (62), Expect = 9.7
 Identities = 14/29 (48%), Positives = 16/29 (55%)
 Frame = -2

Query: 503 PHPRQAPHFRHHLHCPRLPGLSGPGVPRP 417
           P P+ AP  R  L  P  PGL G G+P P
Sbjct: 94  PGPKGAPGERGSLGPPGPPGLGGKGLPGP 122


>AY358367-1|AAQ88733.1|  625|Homo sapiens YVTM2421 protein.
          Length = 625

 Score = 29.1 bits (62), Expect = 9.7
 Identities = 12/30 (40%), Positives = 16/30 (53%)
 Frame = -2

Query: 503 PHPRQAPHFRHHLHCPRLPGLSGPGVPRPQ 414
           P+    PHF H+ H    P ++GPG   PQ
Sbjct: 121 PYLTHHPHFIHNSHTAYYPPVTGPGDMPPQ 150


>AL035669-11|CAI95767.2|  191|Homo sapiens collagen type IX alpha 3
           protein.
          Length = 191

 Score = 29.1 bits (62), Expect = 9.7
 Identities = 14/29 (48%), Positives = 16/29 (55%)
 Frame = -2

Query: 503 PHPRQAPHFRHHLHCPRLPGLSGPGVPRP 417
           P P+ AP  R  L  P  PGL G G+P P
Sbjct: 57  PGPKGAPGERGSLGPPGPPGLGGKGLPGP 85


>AL035669-10|CAC12750.1|  684|Homo sapiens collagen type IX alpha 3
           protein.
          Length = 684

 Score = 29.1 bits (62), Expect = 9.7
 Identities = 14/29 (48%), Positives = 16/29 (55%)
 Frame = -2

Query: 503 PHPRQAPHFRHHLHCPRLPGLSGPGVPRP 417
           P P+ AP  R  L  P  PGL G G+P P
Sbjct: 94  PGPKGAPGERGSLGPPGPPGLGGKGLPGP 122


>AK223599-1|BAD97319.1| 1204|Homo sapiens factor for adipocyte
           differentiation 104 variant protein.
          Length = 1204

 Score = 29.1 bits (62), Expect = 9.7
 Identities = 12/30 (40%), Positives = 16/30 (53%)
 Frame = -2

Query: 503 PHPRQAPHFRHHLHCPRLPGLSGPGVPRPQ 414
           P+    PHF H+ H    P ++GPG   PQ
Sbjct: 125 PYLTHHPHFIHNSHTAYYPPVTGPGDMPPQ 154


>AF026802-1|AAD47357.1|  684|Homo sapiens alpha-3 type IX collagen
           protein.
          Length = 684

 Score = 29.1 bits (62), Expect = 9.7
 Identities = 14/29 (48%), Positives = 16/29 (55%)
 Frame = -2

Query: 503 PHPRQAPHFRHHLHCPRLPGLSGPGVPRP 417
           P P+ AP  R  L  P  PGL G G+P P
Sbjct: 94  PGPKGAPGERGSLGPPGPPGLGGKGLPGP 122


>AB098597-1|BAC53727.1| 1204|Homo sapiens FAD104 protein.
          Length = 1204

 Score = 29.1 bits (62), Expect = 9.7
 Identities = 12/30 (40%), Positives = 16/30 (53%)
 Frame = -2

Query: 503 PHPRQAPHFRHHLHCPRLPGLSGPGVPRPQ 414
           P+    PHF H+ H    P ++GPG   PQ
Sbjct: 125 PYLTHHPHFIHNSHTAYYPPVTGPGDMPPQ 154


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 70,362,510
Number of Sequences: 237096
Number of extensions: 1355787
Number of successful extensions: 3498
Number of sequences better than 10.0: 18
Number of HSP's better than 10.0 without gapping: 3289
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3469
length of database: 76,859,062
effective HSP length: 85
effective length of database: 56,705,902
effective search space used: 4876707572
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)