Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= epV30460
         (516 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

EF633444-1|ABR32189.1|  721|Tribolium castaneum heat shock prote...    21   6.5  
EF222290-1|ABN79650.1|  378|Tribolium castaneum adipokinetic hor...    21   6.5  
DQ422965-1|ABE02225.1|  378|Tribolium castaneum adipokinetic hor...    21   6.5  
DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 pro...    21   8.6  

>EF633444-1|ABR32189.1|  721|Tribolium castaneum heat shock protein
           90 protein.
          Length = 721

 Score = 21.0 bits (42), Expect = 6.5
 Identities = 8/28 (28%), Positives = 16/28 (57%)
 Frame = -1

Query: 219 QGQSRAAAYRYLRSKIPFNRFIDTRRAN 136
           +GQ    A  ++  ++PF+ F + +R N
Sbjct: 321 EGQLEFRALLFVPRRVPFDLFENKKRKN 348


>EF222290-1|ABN79650.1|  378|Tribolium castaneum adipokinetic
           hormone receptor protein.
          Length = 378

 Score = 21.0 bits (42), Expect = 6.5
 Identities = 9/24 (37%), Positives = 13/24 (54%)
 Frame = +3

Query: 246 LPLTIRWAVCSSTYKGNKKVSIIL 317
           +PL I WA   S Y G+    I++
Sbjct: 107 MPLEIGWASTVSWYAGDAMCRIMM 130


>DQ422965-1|ABE02225.1|  378|Tribolium castaneum adipokinetic
           hormone receptor protein.
          Length = 378

 Score = 21.0 bits (42), Expect = 6.5
 Identities = 9/24 (37%), Positives = 13/24 (54%)
 Frame = +3

Query: 246 LPLTIRWAVCSSTYKGNKKVSIIL 317
           +PL I WA   S Y G+    I++
Sbjct: 107 MPLEIGWASTVSWYAGDAMCRIMM 130


>DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10
           protein.
          Length = 2700

 Score = 20.6 bits (41), Expect = 8.6
 Identities = 8/23 (34%), Positives = 15/23 (65%)
 Frame = +1

Query: 286 TRAIKKFPSFYRLENLHAYQDRH 354
           ++ + K+PSF R  +L+  + RH
Sbjct: 139 SQELLKYPSFARGRSLYDSRGRH 161


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 103,355
Number of Sequences: 336
Number of extensions: 2054
Number of successful extensions: 4
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 4
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4
length of database: 122,585
effective HSP length: 53
effective length of database: 104,777
effective search space used: 12363686
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)