Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= epV30457
(516 letters)
Database: arabidopsis
28,952 sequences; 12,070,560 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At5g17310.2 68418.m02028 UTP--glucose-1-phosphate uridylyltransf... 97 5e-21
At3g03250.1 68416.m00321 UTP--glucose-1-phosphate uridylyltransf... 97 6e-21
At3g27470.1 68416.m03433 expressed protein contains Pfam profile... 31 0.35
At3g23210.1 68416.m02926 basic helix-loop-helix (bHLH) family pr... 31 0.35
At5g17310.1 68418.m02027 UTP--glucose-1-phosphate uridylyltransf... 29 1.4
At5g37370.2 68418.m04490 pre-mRNA splicing factor PRP38 family p... 29 1.9
At5g37370.1 68418.m04489 pre-mRNA splicing factor PRP38 family p... 29 1.9
At3g22100.1 68416.m02788 basic helix-loop-helix (bHLH) family pr... 28 3.2
At4g04740.1 68417.m00695 calcium-dependent protein kinase, putat... 28 4.3
At4g04710.1 68417.m00692 calcium-dependent protein kinase, putat... 28 4.3
At2g22140.1 68415.m02630 expressed protein ; expression supporte... 28 4.3
At4g38070.1 68417.m05377 bHLH family protein contains Pfam profi... 27 5.7
At4g21940.1 68417.m03174 calcium-dependent protein kinase, putat... 27 5.7
At4g04720.1 68417.m00693 calcium-dependent protein kinase, putat... 27 5.7
At2g01260.2 68415.m00039 expressed protein 27 5.7
At2g01260.1 68415.m00038 expressed protein 27 5.7
At1g78230.1 68414.m09116 leucine-rich repeat family protein 27 7.5
At1g31070.2 68414.m03804 UDP-N-acetylglucosamine pyrophosphoryla... 27 7.5
At4g32760.1 68417.m04661 VHS domain-containing protein / GAT dom... 27 9.9
At4g18740.2 68417.m02770 expressed protein 27 9.9
At4g18740.1 68417.m02769 expressed protein 27 9.9
At4g08710.1 68417.m01439 hypothetical protein contains Pfam prof... 27 9.9
At2g35020.1 68415.m04296 UTP--glucose-1-phosphate uridylyltransf... 27 9.9
>At5g17310.2 68418.m02028 UTP--glucose-1-phosphate
uridylyltransferase, putative / UDP-glucose
pyrophosphorylase, putative / UGPase, putative strong
similarity to SP|P19595 UTP--glucose-1-phosphate
uridylyltransferase (EC 2.7.7.9) (UDP-glucose
pyrophosphorylase) (UDPGP) (UGPase) {Solanum tuberosum};
contains Pfam profile PF01704: UTP--glucose-1-phosphate
uridylyltransferase
Length = 470
Score = 97.5 bits (232), Expect = 5e-21
Identities = 48/96 (50%), Positives = 65/96 (67%), Gaps = 2/96 (2%)
Frame = +2
Query: 233 EKEFKGFKTLFSRFLAEQGPSVTWEKIEKLPEGAVIDYNSLSTPTTD--NVHHMLDKLVV 406
E E GF L SR+L+ + + W KI+ + V+ Y+ ++ + D ++LDKLVV
Sbjct: 24 ENEKSGFINLVSRYLSGEAQHIEWSKIQTPTDEIVVPYDKMANVSEDASETKYLLDKLVV 83
Query: 407 VKLNGGLGTSMGCKGPKSVIQVRNDLTFLDLTVQQI 514
+KLNGGLGT+MGC GPKSVI+VR+ LTFLDL V QI
Sbjct: 84 LKLNGGLGTTMGCTGPKSVIEVRDGLTFLDLIVIQI 119
>At3g03250.1 68416.m00321 UTP--glucose-1-phosphate
uridylyltransferase, putative / UDP-glucose
pyrophosphorylase, putative / UGPase, putative strong
similarity to SP|P19595 UTP--glucose-1-phosphate
uridylyltransferase (EC 2.7.7.9) (UDP-glucose
pyrophosphorylase) (UDPGP) (UGPase) {Solanum tuberosum};
contains Pfam profile PF01704: UTP--glucose-1-phosphate
uridylyltransferase
Length = 469
Score = 97.1 bits (231), Expect = 6e-21
Identities = 50/97 (51%), Positives = 67/97 (69%), Gaps = 3/97 (3%)
Frame = +2
Query: 233 EKEFKGFKTLFSRFLAEQGPSVTWEKIEKLPEGAVIDYNSLSTPTTDNV---HHMLDKLV 403
E E GF +L SR+L+ + + W KI+ + V+ Y + TP + +V ++LDKLV
Sbjct: 23 ESEKSGFISLVSRYLSGEAQHIEWSKIQTPTDEIVVPYEKM-TPVSQDVAETKNLLDKLV 81
Query: 404 VVKLNGGLGTSMGCKGPKSVIQVRNDLTFLDLTVQQI 514
V+KLNGGLGT+MGC GPKSVI+VR+ LTFLDL V QI
Sbjct: 82 VLKLNGGLGTTMGCTGPKSVIEVRDGLTFLDLIVIQI 118
>At3g27470.1 68416.m03433 expressed protein contains Pfam profile
PF05212: Protein of unknown function (DUF707)
Length = 398
Score = 31.5 bits (68), Expect = 0.35
Identities = 17/56 (30%), Positives = 25/56 (44%)
Frame = -1
Query: 483 RSFRTWITDLGPLQPMDVPRPPLSFTTTNLSSIWCTLSVVGVDRLL*SITAPSGSF 316
R F +W + G D+P PP ++ T IW + + G +RL I P F
Sbjct: 62 RLFGSWSSTKGLKLKNDIPDPPYNYNDT---KIWVSTNPRGAERLPPDIVTPESDF 114
>At3g23210.1 68416.m02926 basic helix-loop-helix (bHLH) family
protein similar to hypothetical protein GB:CAB10220 from
[Arabidopsis thaliana]
Length = 320
Score = 31.5 bits (68), Expect = 0.35
Identities = 12/28 (42%), Positives = 18/28 (64%)
Frame = -3
Query: 217 GFRGRGDELLQLHLQSSEGITFGGLLEV 134
GFRG+ D+ HLQ +G F G++E+
Sbjct: 107 GFRGQNDDSAVPHLQQQQGQVFSGVVEI 134
>At5g17310.1 68418.m02027 UTP--glucose-1-phosphate
uridylyltransferase, putative / UDP-glucose
pyrophosphorylase, putative / UGPase, putative strong
similarity to SP|P19595 UTP--glucose-1-phosphate
uridylyltransferase (EC 2.7.7.9) (UDP-glucose
pyrophosphorylase) (UDPGP) (UGPase) {Solanum tuberosum};
contains Pfam profile PF01704: UTP--glucose-1-phosphate
uridylyltransferase
Length = 390
Score = 29.5 bits (63), Expect = 1.4
Identities = 14/20 (70%), Positives = 17/20 (85%)
Frame = +2
Query: 455 KSVIQVRNDLTFLDLTVQQI 514
+SVI+VR+ LTFLDL V QI
Sbjct: 20 RSVIEVRDGLTFLDLIVIQI 39
>At5g37370.2 68418.m04490 pre-mRNA splicing factor PRP38 family
protein (SRL1) contains Pfam profile PF03371: PRP38
family
Length = 385
Score = 29.1 bits (62), Expect = 1.9
Identities = 16/48 (33%), Positives = 23/48 (47%)
Frame = +1
Query: 283 TGSVGNMGENREASRRSCNRL*QSVHANDGQRAPYARQVGGGEA*RRP 426
+GS G+M E + R + S+ + GQRAP+ G RRP
Sbjct: 172 SGSTGDMTRGSEDTARRPPSVKASLSVSFGQRAPHRASTRGSSPVRRP 219
>At5g37370.1 68418.m04489 pre-mRNA splicing factor PRP38 family
protein (SRL1) contains Pfam profile PF03371: PRP38
family
Length = 393
Score = 29.1 bits (62), Expect = 1.9
Identities = 16/48 (33%), Positives = 23/48 (47%)
Frame = +1
Query: 283 TGSVGNMGENREASRRSCNRL*QSVHANDGQRAPYARQVGGGEA*RRP 426
+GS G+M E + R + S+ + GQRAP+ G RRP
Sbjct: 180 SGSTGDMTRGSEDTARRPPSVKASLSVSFGQRAPHRASTRGSSPVRRP 227
>At3g22100.1 68416.m02788 basic helix-loop-helix (bHLH) family
protein contains Pfam profile: PF00010 helix-loop-helix
DNA-binding domain
Length = 252
Score = 28.3 bits (60), Expect = 3.2
Identities = 22/74 (29%), Positives = 35/74 (47%)
Frame = +2
Query: 101 AVTSGTPSGSRDFKEATKRDALARLEVELEKLISTAPETRRPQLEKEFKGFKTLFSRFLA 280
+ TSG+P+ S D TKR ++ LEKL+ P R+ L + + +FL
Sbjct: 125 STTSGSPTASNDGGIITKRRKISDKIRSLEKLM---PWERKMNLAMTLEE-SHKYIKFLQ 180
Query: 281 EQGPSVTWEKIEKL 322
Q S+ W +E +
Sbjct: 181 SQIASLRWMPLESV 194
>At4g04740.1 68417.m00695 calcium-dependent protein kinase, putative
/ CDPK, putative similar to calcium-dependent protein
kinase [Lycopersicon esculentum]
gi|19171502|emb|CAC87494
Length = 520
Score = 27.9 bits (59), Expect = 4.3
Identities = 10/28 (35%), Positives = 19/28 (67%)
Frame = +2
Query: 233 EKEFKGFKTLFSRFLAEQGPSVTWEKIE 316
E+E KG KTLF+ + ++T+E+++
Sbjct: 368 EEEIKGLKTLFANMDTNRSGTITYEQLQ 395
>At4g04710.1 68417.m00692 calcium-dependent protein kinase, putative
/ CDPK, putative similar to calcium-dependent protein
kinase [Nicotiana tabacum] gi|3283996|gb|AAC25423;
contains protein kinase domain, Pfam:PF00069; contains
EF hand domain (calcium-binding EF-hand), Pfam:PF00036,
INTERPRO:IPR002048
Length = 575
Score = 27.9 bits (59), Expect = 4.3
Identities = 10/28 (35%), Positives = 19/28 (67%)
Frame = +2
Query: 233 EKEFKGFKTLFSRFLAEQGPSVTWEKIE 316
E+E KG KT+F ++ S+T+E+++
Sbjct: 331 EEEIKGLKTMFENMDMDKSGSITYEELK 358
>At2g22140.1 68415.m02630 expressed protein ; expression supported
by MPSS
Length = 506
Score = 27.9 bits (59), Expect = 4.3
Identities = 21/63 (33%), Positives = 28/63 (44%)
Frame = +2
Query: 59 KK*SQKPTTPIKRFAVTSGTPSGSRDFKEATKRDALARLEVELEKLISTAPETRRPQLEK 238
KK + T P+ A+ S D A + L + + LEK S A E R +LEK
Sbjct: 166 KKKIRTTTLPVPGEALPKKRQS-KEDKTSAMEEKKLRKEQERLEKAASKAEEAERKRLEK 224
Query: 239 EFK 247
E K
Sbjct: 225 EKK 227
>At4g38070.1 68417.m05377 bHLH family protein contains Pfam profile:
PF00010 helix-loop-helix DNA-binding domain; PMID:
12679534; putative bHLH131 transcription factor
Length = 1513
Score = 27.5 bits (58), Expect = 5.7
Identities = 16/54 (29%), Positives = 26/54 (48%)
Frame = +2
Query: 110 SGTPSGSRDFKEATKRDALARLEVELEKLISTAPETRRPQLEKEFKGFKTLFSR 271
SG S + +++ + R E+E K + ET+R + EK KG K + R
Sbjct: 115 SGLDEASEKNIDLEQKNNVYRAEIEGLKGLLAVAETKRIEAEKTVKGMKEMRGR 168
>At4g21940.1 68417.m03174 calcium-dependent protein kinase, putative
/ CDPK, putative similar to calcium-dependent protein
kinase [Nicotiana tabacum] gi|3283996|gb|AAC25423
Length = 554
Score = 27.5 bits (58), Expect = 5.7
Identities = 9/28 (32%), Positives = 20/28 (71%)
Frame = +2
Query: 233 EKEFKGFKTLFSRFLAEQGPSVTWEKIE 316
E+E KG KT+F+ ++ ++T+E+++
Sbjct: 401 EEEIKGLKTMFANMDTDKSGTITYEELK 428
>At4g04720.1 68417.m00693 calcium-dependent protein kinase, putative
/ CDPK, putative similar to calcium-dependent protein
kinase(CDPK) [Carrot] SWISS-PROT:P28582
Length = 531
Score = 27.5 bits (58), Expect = 5.7
Identities = 9/28 (32%), Positives = 20/28 (71%)
Frame = +2
Query: 233 EKEFKGFKTLFSRFLAEQGPSVTWEKIE 316
E+E KG KT+F+ ++ ++T+E+++
Sbjct: 379 EEEIKGLKTMFANIDTDKSGTITYEELK 406
>At2g01260.2 68415.m00039 expressed protein
Length = 324
Score = 27.5 bits (58), Expect = 5.7
Identities = 24/76 (31%), Positives = 34/76 (44%), Gaps = 4/76 (5%)
Frame = +2
Query: 140 KEATKR-DALARLEVELEKLISTAPETRRPQLEKEFKGFKTLFSRFLAEQGPSVTWEKIE 316
+ A +R D L R + ++ + S+AP + QLE L RFL PSV + +
Sbjct: 25 RRANQRIDQLRRAQSDVSNVPSSAPSPHKQQLEPSDLSSSNL-DRFLESVTPSVPAQFLS 83
Query: 317 KL---PEGAVIDYNSL 355
K A DYN L
Sbjct: 84 KTLLRERRADDDYNKL 99
>At2g01260.1 68415.m00038 expressed protein
Length = 369
Score = 27.5 bits (58), Expect = 5.7
Identities = 24/76 (31%), Positives = 34/76 (44%), Gaps = 4/76 (5%)
Frame = +2
Query: 140 KEATKR-DALARLEVELEKLISTAPETRRPQLEKEFKGFKTLFSRFLAEQGPSVTWEKIE 316
+ A +R D L R + ++ + S+AP + QLE L RFL PSV + +
Sbjct: 25 RRANQRIDQLRRAQSDVSNVPSSAPSPHKQQLEPSDLSSSNL-DRFLESVTPSVPAQFLS 83
Query: 317 KL---PEGAVIDYNSL 355
K A DYN L
Sbjct: 84 KTLLRERRADDDYNKL 99
>At1g78230.1 68414.m09116 leucine-rich repeat family protein
Length = 676
Score = 27.1 bits (57), Expect = 7.5
Identities = 12/18 (66%), Positives = 13/18 (72%)
Frame = -1
Query: 270 LLKSVLKPLNSFSSCGRL 217
LL SV PL+ FS CGRL
Sbjct: 18 LLSSVFCPLSLFSGCGRL 35
>At1g31070.2 68414.m03804 UDP-N-acetylglucosamine
pyrophosphorylase-related low similarity to SP|P43123
UDP-N-acetylglucosamine pyrophosphorylase (EC 2.7.7.23)
{Saccharomyces cerevisiae}
Length = 505
Score = 27.1 bits (57), Expect = 7.5
Identities = 12/26 (46%), Positives = 15/26 (57%)
Frame = +2
Query: 395 KLVVVKLNGGLGTSMGCKGPKSVIQV 472
KL VV L+GG GT +G PK +
Sbjct: 128 KLGVVLLSGGQGTRLGSSDPKGCFNI 153
>At4g32760.1 68417.m04661 VHS domain-containing protein / GAT
domain-containing protein weak similarity to hepatocyte
growth factor-regulated tyrosine kinase substrate HRS
isoform 2 [Homo sapiens] GI:9022389; contains Pfam
profiles PF00790: VHS domain, PF03127: GAT domain
Length = 838
Score = 26.6 bits (56), Expect = 9.9
Identities = 12/36 (33%), Positives = 17/36 (47%)
Frame = +1
Query: 7 LKLCLCCYQSLLSRLLHKEMKPETNDSDKKIRSHQR 114
L+ C CCY SL L +E + + + K R R
Sbjct: 41 LRFCFCCYLSLSLYLFERERERVNSKMEIKFRFFTR 76
>At4g18740.2 68417.m02770 expressed protein
Length = 214
Score = 26.6 bits (56), Expect = 9.9
Identities = 15/38 (39%), Positives = 22/38 (57%), Gaps = 1/38 (2%)
Frame = -1
Query: 498 RSRKVRSFRTWITDLGPLQPMDVPRPPLSFT-TTNLSS 388
+SRK T + + P + +++PRPP SF T LSS
Sbjct: 142 KSRKKTEGDTSVKEKPPKRQVELPRPPSSFVKRTPLSS 179
>At4g18740.1 68417.m02769 expressed protein
Length = 245
Score = 26.6 bits (56), Expect = 9.9
Identities = 15/38 (39%), Positives = 22/38 (57%), Gaps = 1/38 (2%)
Frame = -1
Query: 498 RSRKVRSFRTWITDLGPLQPMDVPRPPLSFT-TTNLSS 388
+SRK T + + P + +++PRPP SF T LSS
Sbjct: 142 KSRKKTEGDTSVKEKPPKRQVELPRPPSSFVKRTPLSS 179
>At4g08710.1 68417.m01439 hypothetical protein contains Pfam profile
PF03384: Drosophila protein of unknown function, DUF287
Length = 715
Score = 26.6 bits (56), Expect = 9.9
Identities = 13/34 (38%), Positives = 18/34 (52%)
Frame = +2
Query: 122 SGSRDFKEATKRDALARLEVELEKLISTAPETRR 223
+G+ DFK +D + + E EKLI PE R
Sbjct: 297 TGNLDFKRKHFKDTVVKREDVREKLIGMVPEGER 330
>At2g35020.1 68415.m04296 UTP--glucose-1-phosphate
uridylyltransferase family protein similar to SP|Q16222
UDP-N-acetylhexosamine pyrophosphorylase (Antigen X)
{Homo sapiens}; contains Pfam profile PF01704:
UTP--glucose-1-phosphate uridylyltransferase
Length = 502
Score = 26.6 bits (56), Expect = 9.9
Identities = 12/26 (46%), Positives = 15/26 (57%)
Frame = +2
Query: 395 KLVVVKLNGGLGTSMGCKGPKSVIQV 472
KL VV L+GG GT +G PK +
Sbjct: 124 KLGVVLLSGGQGTRLGSSDPKGCYNI 149
Database: arabidopsis
Posted date: Oct 4, 2007 10:56 AM
Number of letters in database: 12,070,560
Number of sequences in database: 28,952
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 11,774,268
Number of Sequences: 28952
Number of extensions: 252109
Number of successful extensions: 857
Number of sequences better than 10.0: 23
Number of HSP's better than 10.0 without gapping: 814
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 853
length of database: 12,070,560
effective HSP length: 76
effective length of database: 9,870,208
effective search space used: 937669760
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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