Bombyx BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= epV30455
         (516 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_P83632 Cluster: 27 kDa hemolymph protein precursor; n=5...    46   5e-04

>UniRef50_P83632 Cluster: 27 kDa hemolymph protein precursor; n=5;
           Obtectomera|Rep: 27 kDa hemolymph protein precursor -
           Galleria mellonella (Wax moth)
          Length = 236

 Score = 46.0 bits (104), Expect = 5e-04
 Identities = 34/102 (33%), Positives = 48/102 (47%), Gaps = 9/102 (8%)
 Frame = +3

Query: 30  MMWKTVLITIFAAGVLADDFS-----QITAVVTFAMHQEQC*R----QSSLKLEAALRTF 182
           MMWK +++TI A GVL DD +     Q T  +   + + QC +      +  +E A + F
Sbjct: 1   MMWKLIIVTILAVGVLCDDIATAVNEQTTQQIRDTL-KAQCKKNGAEDKAQDVENAAKNF 59

Query: 183 GNCLKGLGRFKCSENRN*RSQAQTVHFDEVFKKXCDXSAQLK 308
             C+KGL  F  +  +           DEVF K C  S QLK
Sbjct: 60  VECVKGLFDFS-TIKKEIEDAKPNGALDEVFGKYCAKSPQLK 100


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 431,390,982
Number of Sequences: 1657284
Number of extensions: 6962506
Number of successful extensions: 13779
Number of sequences better than 10.0: 1
Number of HSP's better than 10.0 without gapping: 13463
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 13775
length of database: 575,637,011
effective HSP length: 95
effective length of database: 418,195,031
effective search space used: 31782822356
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)