Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= epV30455
         (516 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

09_06_0176 + 21351884-21352693,21352821-21352976,21353425-213536...    27   6.8  
11_05_0087 + 18970741-18972702                                         27   8.9  
10_08_0377 + 17343244-17343372,17344316-17344393,17344496-173445...    27   8.9  

>09_06_0176 +
           21351884-21352693,21352821-21352976,21353425-21353613,
           21354741-21356354,21356446-21356553,21356649-21357509,
           21357586-21357632,21358591-21358697,21359512-21359630,
           21359706-21359915,21360412-21360693,21360820-21360952,
           21361256-21361413,21362564-21362647,21362949-21363035
          Length = 1654

 Score = 27.5 bits (58), Expect = 6.8
 Identities = 12/24 (50%), Positives = 15/24 (62%)
 Frame = +2

Query: 113 LRNAPRTMLKTKFPEVGSSIAYLW 184
           L+NAP  +L TKF E  + I  LW
Sbjct: 912 LKNAPADILSTKFNEACAEIRDLW 935


>11_05_0087 + 18970741-18972702
          Length = 653

 Score = 27.1 bits (57), Expect = 8.9
 Identities = 14/47 (29%), Positives = 20/47 (42%)
 Frame = -2

Query: 248 GLASSISVFRTFKSXQSLEAVSKGTQCCFQLQGTLSSALFLVHCEGH 108
           G+  S     T        A +K   CC +L+   ++AL L  C GH
Sbjct: 308 GVVDSAPALATVHLESVFLAGTKEDGCCARLRFPAATALVLAKCRGH 354


>10_08_0377 +
           17343244-17343372,17344316-17344393,17344496-17344558,
           17344836-17344883,17345203-17345349,17346264-17346395,
           17346905-17346945,17347605-17347633,17348969-17349096,
           17349919-17349994,17350111-17350231,17350300-17350399,
           17350491-17350572,17350664-17350746,17351978-17352088,
           17352260-17352311,17352363-17352408,17352652-17352860,
           17353128-17353251,17353667-17353741,17353837-17353891,
           17354476-17354595,17354670-17354762,17354869-17355014,
           17355152-17355329,17356876-17357110,17357824-17357912
          Length = 929

 Score = 27.1 bits (57), Expect = 8.9
 Identities = 16/58 (27%), Positives = 26/58 (44%)
 Frame = +3

Query: 48  LITIFAAGVLADDFSQITAVVTFAMHQEQC*RQSSLKLEAALRTFGNCLKGLGRFKCS 221
           L+ I   G+   + +   A V F    E C R+ S  L+   + +   L G+G +K S
Sbjct: 531 LVDILNKGMSTSEETAAAASVAFKYICEDCRRKFSGSLDGLFQIYQIALSGVGGYKVS 588


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 11,902,529
Number of Sequences: 37544
Number of extensions: 200774
Number of successful extensions: 396
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 393
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 396
length of database: 14,793,348
effective HSP length: 77
effective length of database: 11,902,460
effective search space used: 1118831240
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)