Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= epV30454
         (516 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

U09586-1|AAC47270.1|  425|Tribolium castaneum ORF 1 protein.           24   0.92 
EF633444-1|ABR32189.1|  721|Tribolium castaneum heat shock prote...    21   4.9  
DQ659248-1|ABG47446.1|  496|Tribolium castaneum chitinase 8 prot...    21   6.5  
AM292362-1|CAL23174.2|  398|Tribolium castaneum gustatory recept...    21   6.5  
AF227923-1|AAF36721.1|  351|Tribolium castaneum abdominal-B prot...    21   6.5  
AM292382-1|CAL23194.2|  670|Tribolium castaneum gustatory recept...    21   8.6  

>U09586-1|AAC47270.1|  425|Tribolium castaneum ORF 1 protein.
          Length = 425

 Score = 23.8 bits (49), Expect = 0.92
 Identities = 7/14 (50%), Positives = 9/14 (64%)
 Frame = +3

Query: 405 NKWKPGEPNDSHNN 446
           N W+   PND+ NN
Sbjct: 386 NHWRKNNPNDNRNN 399


>EF633444-1|ABR32189.1|  721|Tribolium castaneum heat shock protein
           90 protein.
          Length = 721

 Score = 21.4 bits (43), Expect = 4.9
 Identities = 9/22 (40%), Positives = 13/22 (59%)
 Frame = -2

Query: 368 EDSFGRLR*DPDTDPFEGLCRV 303
           ED   + + + D   FEGLC+V
Sbjct: 542 EDEEEKKKREEDKAKFEGLCKV 563


>DQ659248-1|ABG47446.1|  496|Tribolium castaneum chitinase 8
           protein.
          Length = 496

 Score = 21.0 bits (42), Expect = 6.5
 Identities = 6/15 (40%), Positives = 7/15 (46%)
 Frame = +3

Query: 282 DAVTTYWNTTQPFEW 326
           D V  YW T   + W
Sbjct: 24  DKVVCYWGTWSTYRW 38


>AM292362-1|CAL23174.2|  398|Tribolium castaneum gustatory receptor
           candidate 41 protein.
          Length = 398

 Score = 21.0 bits (42), Expect = 6.5
 Identities = 7/18 (38%), Positives = 11/18 (61%)
 Frame = +3

Query: 360 GVFETVDGVSIMDVYNKW 413
           GV  T+  + I  ++NKW
Sbjct: 47  GVIITIGCLCIWSIFNKW 64


>AF227923-1|AAF36721.1|  351|Tribolium castaneum abdominal-B
           protein.
          Length = 351

 Score = 21.0 bits (42), Expect = 6.5
 Identities = 10/34 (29%), Positives = 14/34 (41%)
 Frame = +3

Query: 216 DAKKTCEMEGATFFYPDDKFEFDAVTTYWNTTQP 317
           D +      G   + PD+ FE     TY+N   P
Sbjct: 65  DCEGVIRHHGQWNYSPDNHFEQYPNPTYYNLADP 98


>AM292382-1|CAL23194.2|  670|Tribolium castaneum gustatory receptor
           candidate 61 protein.
          Length = 670

 Score = 20.6 bits (41), Expect = 8.6
 Identities = 8/16 (50%), Positives = 12/16 (75%)
 Frame = +2

Query: 317 LRMDQYRDLIADGQRS 364
           L  ++YR LI DG++S
Sbjct: 493 LYKNKYRKLIVDGKKS 508


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 118,660
Number of Sequences: 336
Number of extensions: 2547
Number of successful extensions: 6
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 6
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6
length of database: 122,585
effective HSP length: 53
effective length of database: 104,777
effective search space used: 12363686
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)