Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= epV30454
(516 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_55359| Best HMM Match : No HMM Matches (HMM E-Value=.) 56 2e-08
SB_48103| Best HMM Match : Lectin_C (HMM E-Value=5.2e-36) 49 2e-06
SB_24224| Best HMM Match : Lectin_C (HMM E-Value=0) 46 1e-05
SB_9329| Best HMM Match : Lectin_C (HMM E-Value=0) 46 2e-05
SB_59678| Best HMM Match : Lectin_C (HMM E-Value=3.3e-19) 45 3e-05
SB_42813| Best HMM Match : Lectin_C (HMM E-Value=4.8e-21) 45 4e-05
SB_3713| Best HMM Match : Lectin_C (HMM E-Value=6.6e-10) 42 2e-04
SB_46349| Best HMM Match : Lectin_C (HMM E-Value=3.2e-06) 42 2e-04
SB_56272| Best HMM Match : No HMM Matches (HMM E-Value=.) 38 0.006
SB_37000| Best HMM Match : Astacin (HMM E-Value=5.5e-19) 37 0.011
SB_59679| Best HMM Match : Lectin_C (HMM E-Value=5.3e-10) 37 0.011
SB_55360| Best HMM Match : No HMM Matches (HMM E-Value=.) 36 0.015
SB_47980| Best HMM Match : EGF_CA (HMM E-Value=7.6e-20) 36 0.015
SB_41711| Best HMM Match : No HMM Matches (HMM E-Value=.) 36 0.015
SB_43077| Best HMM Match : No HMM Matches (HMM E-Value=.) 36 0.026
SB_28600| Best HMM Match : EGF_CA (HMM E-Value=4.2e-40) 35 0.035
SB_7361| Best HMM Match : No HMM Matches (HMM E-Value=.) 35 0.046
SB_56842| Best HMM Match : No HMM Matches (HMM E-Value=.) 32 0.24
SB_24278| Best HMM Match : No HMM Matches (HMM E-Value=.) 32 0.24
SB_9786| Best HMM Match : Lectin_C (HMM E-Value=3.8e-22) 32 0.24
SB_49003| Best HMM Match : Lectin_C (HMM E-Value=1e-09) 32 0.24
SB_8083| Best HMM Match : Lectin_C (HMM E-Value=3.8e-22) 32 0.24
SB_4382| Best HMM Match : Lectin_C (HMM E-Value=3.8e-22) 32 0.24
SB_24529| Best HMM Match : Lectin_C (HMM E-Value=3.4e-27) 31 0.43
SB_48878| Best HMM Match : Fibrinogen_C (HMM E-Value=0) 30 0.98
SB_36763| Best HMM Match : EGF (HMM E-Value=1.7e-06) 30 0.98
SB_49537| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 2.3
SB_40810| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 2.3
SB_44272| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 3.0
SB_52733| Best HMM Match : DUF948 (HMM E-Value=0.37) 28 4.0
SB_46952| Best HMM Match : Gemini_AL2 (HMM E-Value=1.3) 28 4.0
SB_58178| Best HMM Match : UBACT (HMM E-Value=1.7e-34) 28 4.0
SB_46133| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 5.3
SB_8405| Best HMM Match : PAN (HMM E-Value=0.044) 28 5.3
SB_18087| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 5.3
SB_50950| Best HMM Match : AAA_5 (HMM E-Value=0.0006) 27 9.2
>SB_55359| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 2516
Score = 55.6 bits (128), Expect = 2e-08
Identities = 22/60 (36%), Positives = 34/60 (56%)
Frame = +3
Query: 333 IGISSQTAKGVFETVDGVSIMDVYNKWKPGEPNDSHNNEDCVVIHRNDGLMNDDDCAKSF 512
+G + + + + DG + Y W+ GEPN+ +NEDC + DGL NDDDC+K +
Sbjct: 51 VGFNDRANESSYNWTDGTA-KPFYTNWRRGEPNNFQDNEDCTELLYQDGLWNDDDCSKEY 109
Score = 51.6 bits (118), Expect = 4e-07
Identities = 32/111 (28%), Positives = 49/111 (44%), Gaps = 3/111 (2%)
Frame = +3
Query: 177 SFYKIHTLYKKWVDAKKTCEMEGATFFYPDDKFEFDAVTTYWNTTQPFEWISIGISSQTA 356
S YK T K W+ A++ C G D+ E +Y T + IG++ +
Sbjct: 132 SCYKFSTSSKTWLIAQQDCHQSGGYLVKVDNSDE-QHFLSYMMKTVMKQAAWIGLNDRAI 190
Query: 357 KGVFETV-DGVSIMDVYNKWKPGEPNDSHNNEDCVVIHRND--GLMNDDDC 500
+G + D + Y+ W GEPND + EDC+ ++ G NDD C
Sbjct: 191 EGTYVWEGDNTKLGQNYSHWYSGEPNDHASVEDCISMYSGSLGGFWNDDYC 241
Score = 39.1 bits (87), Expect = 0.002
Identities = 27/99 (27%), Positives = 41/99 (41%)
Frame = +3
Query: 204 KKWVDAKKTCEMEGATFFYPDDKFEFDAVTTYWNTTQPFEWISIGISSQTAKGVFETVDG 383
K W++A+ C E V + T + + IG++ +GV DG
Sbjct: 1463 KTWMEARDFCRKSRGDLVSLRTANENAFVFSEIKTRYYYWTVWIGLNDLGTEGVNTWSDG 1522
Query: 384 VSIMDVYNKWKPGEPNDSHNNEDCVVIHRNDGLMNDDDC 500
+ Y W EPN+ + EDC + R DG ND +C
Sbjct: 1523 SPMS--YINWGNKEPNNWNGMEDCGEMSRFDGRWNDQNC 1559
Score = 33.5 bits (73), Expect = 0.11
Identities = 17/57 (29%), Positives = 29/57 (50%)
Frame = +3
Query: 336 GISSQTAKGVFETVDGVSIMDVYNKWKPGEPNDSHNNEDCVVIHRNDGLMNDDDCAK 506
G++ + +G ++ DG + Y W GEPND E+C + + L ND C++
Sbjct: 1861 GLNDRNIEGGWQWSDGSPL--AYVAWNGGEPNDLVGVENCGEMVAGNRLWNDYSCSQ 1915
Score = 31.1 bits (67), Expect = 0.56
Identities = 28/129 (21%), Positives = 47/129 (36%), Gaps = 2/129 (1%)
Frame = +3
Query: 135 KFFRKDYTYIESTESFYKIHTLYKKWVDAKKTCEMEG--ATFFYPDDKFEFDAVTTYWNT 308
K FR++ T + W A+ C G D E V + N
Sbjct: 1306 KMFRRELTVKMKMNRHLRERKGRTTWTGARDACRATGDNTDLVSMHDSGESLFVQSLTNN 1365
Query: 309 TQPFEWISIGISSQTAKGVFETVDGVSIMDVYNKWKPGEPNDSHNNEDCVVIHRNDGLMN 488
+ WI + + ++ DG + + +W P EP DSH+ + V+ ++ G
Sbjct: 1366 SLTL-WIGLNDRGSISGHLWS--DGTPVQ--FTRWGPAEP-DSHSGQQPCVVLKSTGYWG 1419
Query: 489 DDDCAKSFP 515
D C + P
Sbjct: 1420 DVGCYATRP 1428
Score = 28.7 bits (61), Expect = 3.0
Identities = 15/42 (35%), Positives = 22/42 (52%)
Frame = +3
Query: 333 IGISSQTAKGVFETVDGVSIMDVYNKWKPGEPNDSHNNEDCV 458
IG++ +G++ DG S +D + W GEPND CV
Sbjct: 1238 IGLTDTNQRGMYRWTDG-SPVD-WTHWWNGEPNDRGITGSCV 1277
>SB_48103| Best HMM Match : Lectin_C (HMM E-Value=5.2e-36)
Length = 137
Score = 49.2 bits (112), Expect = 2e-06
Identities = 30/102 (29%), Positives = 44/102 (43%)
Frame = +3
Query: 210 WVDAKKTCEMEGATFFYPDDKFEFDAVTTYWNTTQPFEWISIGISSQTAKGVFETVDGVS 389
W DA+ C+ GA E V + + I IG++ + V+E DG
Sbjct: 30 WQDARAACQQAGAELISIQSAAENAFVYSGFRAKYRSWTIWIGLNDLDDESVYEWSDGSP 89
Query: 390 IMDVYNKWKPGEPNDSHNNEDCVVIHRNDGLMNDDDCAKSFP 515
+ WK EPND EDC+ + R +G ND+ C + P
Sbjct: 90 LSYTNYNWK--EPNDWQGQEDCLEMVRWNGKWNDNQCNRKNP 129
>SB_24224| Best HMM Match : Lectin_C (HMM E-Value=0)
Length = 2726
Score = 46.4 bits (105), Expect = 1e-05
Identities = 29/108 (26%), Positives = 42/108 (38%)
Frame = +3
Query: 183 YKIHTLYKKWVDAKKTCEMEGATFFYPDDKFEFDAVTTYWNTTQPFEWISIGISSQTAKG 362
YK+ W DA+ C+ G F + +E + + N W+ G Q A G
Sbjct: 1347 YKVVFDKSNWDDARANCQSAGGDLFSVTNAYEQRFLENFTNIES---WL--GYRDQKAAG 1401
Query: 363 VFETVDGVSIMDVYNKWKPGEPNDSHNNEDCVVIHRNDGLMNDDDCAK 506
+ DG VY W +D DCVV+ +G D CA+
Sbjct: 1402 TWRWSDGSK--SVYTDWDSSAKDDHDLGMDCVVLDAEEGKWRDSSCAE 1447
>SB_9329| Best HMM Match : Lectin_C (HMM E-Value=0)
Length = 577
Score = 46.0 bits (104), Expect = 2e-05
Identities = 25/97 (25%), Positives = 42/97 (43%)
Frame = +3
Query: 210 WVDAKKTCEMEGATFFYPDDKFEFDAVTTYWNTTQPFEWISIGISSQTAKGVFETVDGVS 389
W A+ C+ EG + E D + T WI G++ ++ + +E DG
Sbjct: 321 WPQARLRCQREGGDLVSILSQQEKDFLIYQMKTVNGI-WIWTGLNDRSVERGYEWSDGSP 379
Query: 390 IMDVYNKWKPGEPNDSHNNEDCVVIHRNDGLMNDDDC 500
+ + W G+PND ++CV + G ND +C
Sbjct: 380 VS--FTSWLYGQPNDHWGRDNCVAVQTRMGSWNDVNC 414
>SB_59678| Best HMM Match : Lectin_C (HMM E-Value=3.3e-19)
Length = 951
Score = 45.2 bits (102), Expect = 3e-05
Identities = 30/110 (27%), Positives = 48/110 (43%), Gaps = 2/110 (1%)
Frame = +3
Query: 159 YIESTESFYKIHTLYKKWVDAKKTCEMEGATFF--YPDDKFEFDAVTTYWNTTQPFEWIS 332
Y+E S YK H W++A C E +T + +++ + + P W
Sbjct: 125 YVEIRGSCYKFHMTKDTWINAFHECTRENSTLLSVHSEEEVYYIDRVSISGRDGPL-W-- 181
Query: 333 IGISSQTAKGVFETVDGVSIMDVYNKWKPGEPNDSHNNEDCVVIHRNDGL 482
G++ + KG++ DG S+ Y W PGEP S E C+ + D L
Sbjct: 182 TGLNDRIKKGMYSYTDGSSV--EYLDWIPGEP--SQKGEQCIGMRLKDSL 227
>SB_42813| Best HMM Match : Lectin_C (HMM E-Value=4.8e-21)
Length = 276
Score = 44.8 bits (101), Expect = 4e-05
Identities = 31/106 (29%), Positives = 46/106 (43%), Gaps = 4/106 (3%)
Frame = +3
Query: 204 KKWVDAKKTCEMEGATFFYPDDKFEFDAVTTYWNTTQPFEWISIGISSQTAKGVFETVDG 383
+ W A++ CE +GA Y +D+ EF + IG+ S + DG
Sbjct: 146 QSWYKAQELCEQDGAMLAYIEDEEEFQFLRRSRPPGSSTNQYFIGLRSANDSKTWLWPDG 205
Query: 384 VSIMDVYNKWKPGEPND-SHNNEDCVVI---HRNDGLMNDDDCAKS 509
+ KW GEPN+ N EDCV + ++G ND C +S
Sbjct: 206 TKAK--FFKWAKGEPNNYQGNTEDCVAMDFRSLSNGSYNDVLCQES 249
>SB_3713| Best HMM Match : Lectin_C (HMM E-Value=6.6e-10)
Length = 202
Score = 42.3 bits (95), Expect = 2e-04
Identities = 29/88 (32%), Positives = 42/88 (47%), Gaps = 1/88 (1%)
Frame = +3
Query: 195 TLYKK-WVDAKKTCEMEGATFFYPDDKFEFDAVTTYWNTTQPFEWISIGISSQTAKGVFE 371
TL KK W DA+ +C +GA +E VT+ T+ + IG++ +G++
Sbjct: 117 TLDKKTWPDARDSCRAQGAELASIHTGWESALVTSLLVTSWDAGDVWIGLTDTNQRGIYR 176
Query: 372 TVDGVSIMDVYNKWKPGEPNDSHNNEDC 455
DG S +D N W GEPND C
Sbjct: 177 WTDG-SPVDWTNWWN-GEPNDRGVTGSC 202
>SB_46349| Best HMM Match : Lectin_C (HMM E-Value=3.2e-06)
Length = 76
Score = 42.3 bits (95), Expect = 2e-04
Identities = 21/60 (35%), Positives = 33/60 (55%)
Frame = +3
Query: 333 IGISSQTAKGVFETVDGVSIMDVYNKWKPGEPNDSHNNEDCVVIHRNDGLMNDDDCAKSF 512
IG + + ++G F VDG + + W+ GEPN+ NEDC N G ND+ C+ ++
Sbjct: 11 IGFNDRGSEGNFSWVDGSN--SSFKNWRKGEPNN-WQNEDCAEAVWNTGQWNDELCSNTY 67
>SB_56272| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 162
Score = 37.5 bits (83), Expect = 0.006
Identities = 17/52 (32%), Positives = 24/52 (46%)
Frame = +3
Query: 360 GVFETVDGVSIMDVYNKWKPGEPNDSHNNEDCVVIHRNDGLMNDDDCAKSFP 515
G F D ++ + W GEPN+ E CV ++ GL ND C+ P
Sbjct: 21 GSFRWTDNSNL--TFRNWNSGEPNNYEGQEKCVELYVRSGLWNDVKCSNLRP 70
>SB_37000| Best HMM Match : Astacin (HMM E-Value=5.5e-19)
Length = 1341
Score = 36.7 bits (81), Expect = 0.011
Identities = 25/94 (26%), Positives = 40/94 (42%), Gaps = 3/94 (3%)
Frame = +3
Query: 183 YKIHTLYKKWVDAKKTCEME-GATFFYPDDKFEFDAVTTYWNTTQPFEWISIGISSQTAK 359
YK+ W DA++ C+ ++ + E D V N Q + IG + + +
Sbjct: 1162 YKLVETTMSWSDAEEACKRSFNSSLLSLASQSELDYVR---NAVQDGNSVWIGFNDKGRE 1218
Query: 360 GVFETVDGVSIMDVYNKWKPGEPNDS--HNNEDC 455
G +E D + + W P EPN+ NEDC
Sbjct: 1219 GRWEWTDRSPV--TFKNWSPNEPNNGGFRENEDC 1250
>SB_59679| Best HMM Match : Lectin_C (HMM E-Value=5.3e-10)
Length = 849
Score = 36.7 bits (81), Expect = 0.011
Identities = 26/102 (25%), Positives = 39/102 (38%)
Frame = +3
Query: 159 YIESTESFYKIHTLYKKWVDAKKTCEMEGATFFYPDDKFEFDAVTTYWNTTQPFEWISIG 338
Y E S YK HT K W+ C EGA D + + + +G
Sbjct: 146 YTEYQGSCYKRHTDKKTWMGGVVECAKEGAILTDISDAMQETTLKGLKGKDNKDKLAWVG 205
Query: 339 ISSQTAKGVFETVDGVSIMDVYNKWKPGEPNDSHNNEDCVVI 464
++ + + ++ V G I + WK GEP N CV +
Sbjct: 206 LNDRIKESIYSYVGGNPIEHL--NWKTGEPQGKGQN--CVAL 243
>SB_55360| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1646
Score = 36.3 bits (80), Expect = 0.015
Identities = 21/58 (36%), Positives = 28/58 (48%), Gaps = 2/58 (3%)
Frame = +3
Query: 333 IGISSQTAKGVFETVDGVSIMDVYNKWKPGEPNDSHNNEDCVVIHRN--DGLMNDDDC 500
IG + + A+G F +G + Y W GEPND EDCV + G ND+ C
Sbjct: 852 IGATDEAAEGHF-VWEGDGTVVNYTNWFRGEPNDHSGKEDCVEMMAGYFAGYWNDNFC 908
>SB_47980| Best HMM Match : EGF_CA (HMM E-Value=7.6e-20)
Length = 591
Score = 36.3 bits (80), Expect = 0.015
Identities = 21/59 (35%), Positives = 30/59 (50%), Gaps = 2/59 (3%)
Frame = +3
Query: 333 IGISSQTAKGVFETVDGVSIMDVYNKWKPGEPNDSHNNEDCV-VIHRNDGL-MNDDDCA 503
+G+S T +G F DG + W P +PND + N+DCV + N G ND C+
Sbjct: 101 VGLSDVTTEGRFVWADGSPTN--FTNWAPNQPND-YKNQDCVHTLGENYGYKWNDVQCS 156
>SB_41711| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1662
Score = 36.3 bits (80), Expect = 0.015
Identities = 25/117 (21%), Positives = 50/117 (42%)
Frame = +3
Query: 165 ESTESFYKIHTLYKKWVDAKKTCEMEGATFFYPDDKFEFDAVTTYWNTTQPFEWISIGIS 344
++ S +K + + W DA + C+ G E V+ + + + IG++
Sbjct: 1539 QANHSCFKFVSEKRPWKDASRYCQNIGGNLTSIHSAEENVFVSNLFLIGEGNAYW-IGLN 1597
Query: 345 SQTAKGVFETVDGVSIMDVYNKWKPGEPNDSHNNEDCVVIHRNDGLMNDDDCAKSFP 515
+ F DG S+ + +W +P+D+ ++DC + + D CA S+P
Sbjct: 1598 DLKNEKAFVWSDGTSVD--FTQWAFNKPSDNGKDKDCTYLLKQSKTWIDFSCANSYP 1652
>SB_43077| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1149
Score = 35.5 bits (78), Expect = 0.026
Identities = 21/59 (35%), Positives = 31/59 (52%), Gaps = 2/59 (3%)
Frame = +3
Query: 333 IGISSQTAKGVFETVDGVSIMDVYNKWKPGEPNDSHNNEDCV-VIHRNDGL-MNDDDCA 503
+G+S T++G F DG + W P +PND + N+DCV + N G ND C+
Sbjct: 678 VGLSDVTSEGRFVWADGSPTN--FTNWAPNQPND-YKNQDCVHTLGVNYGYKWNDVQCS 733
>SB_28600| Best HMM Match : EGF_CA (HMM E-Value=4.2e-40)
Length = 1042
Score = 35.1 bits (77), Expect = 0.035
Identities = 16/42 (38%), Positives = 23/42 (54%)
Frame = +3
Query: 333 IGISSQTAKGVFETVDGVSIMDVYNKWKPGEPNDSHNNEDCV 458
+G+S T +G F DG + W P +PND + N+DCV
Sbjct: 652 VGLSDVTTEGQFVWADGSPTN--FTNWAPNQPND-YKNQDCV 690
>SB_7361| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 831
Score = 34.7 bits (76), Expect = 0.046
Identities = 23/59 (38%), Positives = 32/59 (54%), Gaps = 2/59 (3%)
Frame = +3
Query: 333 IGISSQTAKGVFETVDGVSIMDVYNKWKPGEPNDSHNNEDCV-VIHRNDGL-MNDDDCA 503
+G+S +G F DG S M+ N W P +PND + N+DCV + N G ND C+
Sbjct: 323 VGLSDVATEGRFVWADG-SPMNFTN-WAPNQPND-YKNQDCVHTLGVNYGYEWNDVQCS 378
>SB_56842| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 334
Score = 32.3 bits (70), Expect = 0.24
Identities = 17/56 (30%), Positives = 27/56 (48%)
Frame = +3
Query: 333 IGISSQTAKGVFETVDGVSIMDVYNKWKPGEPNDSHNNEDCVVIHRNDGLMNDDDC 500
IG+ + F VDG + Y + G+ + S ++ CV + + DG DDDC
Sbjct: 266 IGLIRKEDDHTFHWVDGTPVD--YTNFASGQHDRSGRSKACVYMRQTDGKWVDDDC 319
>SB_24278| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 363
Score = 32.3 bits (70), Expect = 0.24
Identities = 21/90 (23%), Positives = 35/90 (38%)
Frame = +3
Query: 159 YIESTESFYKIHTLYKKWVDAKKTCEMEGATFFYPDDKFEFDAVTTYWNTTQPFEWISIG 338
+ E+ + Y ++ W DA C +GA D E + + + F W +G
Sbjct: 258 WFEAHKVCYGLYHEKMYWRDAMTLCREQGAGLLTVRDANEMEVIRKHIKEKNLFFW--LG 315
Query: 339 ISSQTAKGVFETVDGVSIMDVYNKWKPGEP 428
G F DG + ++ W+ GEP
Sbjct: 316 ARYSHVNGSFLWSDGTRLH--FHSWRTGEP 343
>SB_9786| Best HMM Match : Lectin_C (HMM E-Value=3.8e-22)
Length = 129
Score = 32.3 bits (70), Expect = 0.24
Identities = 24/85 (28%), Positives = 32/85 (37%)
Frame = +3
Query: 204 KKWVDAKKTCEMEGATFFYPDDKFEFDAVTTYWNTTQPFEWISIGISSQTAKGVFETVDG 383
K W DA+ C G + K E + V+ + W IG+ F VDG
Sbjct: 22 KNWYDAESMCRDLGGYLVKIESKSEDEFVSRELALPENLVW--IGLMRSVINDSFVWVDG 79
Query: 384 VSIMDVYNKWKPGEPNDSHNNEDCV 458
M Y W GEP + + CV
Sbjct: 80 --SMAKYTNWGVGEPIVAGIGKHCV 102
>SB_49003| Best HMM Match : Lectin_C (HMM E-Value=1e-09)
Length = 130
Score = 32.3 bits (70), Expect = 0.24
Identities = 19/62 (30%), Positives = 28/62 (45%), Gaps = 1/62 (1%)
Frame = +3
Query: 333 IGISSQTAKGVFETVDGVSIMDVYNKWKPGEPNDSHNNEDCVVIHRND-GLMNDDDCAKS 509
+G++ +T +G F D Y + PG PN ++ DCVV +D G D C
Sbjct: 64 LGLNDKTTEGNFFWQDSEPAS--YQNFAPGHPNSPGDDTDCVVARDSDEGKWADTKCDAK 121
Query: 510 FP 515
P
Sbjct: 122 RP 123
>SB_8083| Best HMM Match : Lectin_C (HMM E-Value=3.8e-22)
Length = 3445
Score = 32.3 bits (70), Expect = 0.24
Identities = 24/85 (28%), Positives = 32/85 (37%)
Frame = +3
Query: 204 KKWVDAKKTCEMEGATFFYPDDKFEFDAVTTYWNTTQPFEWISIGISSQTAKGVFETVDG 383
K W DA+ C G + K E + V+ + W IG+ F VDG
Sbjct: 22 KNWYDAESMCRDLGGYLVKIESKSEDEFVSRELALPENLVW--IGLMRSVINDSFVWVDG 79
Query: 384 VSIMDVYNKWKPGEPNDSHNNEDCV 458
M Y W GEP + + CV
Sbjct: 80 --SMAKYTNWGVGEPIVAGIGKHCV 102
>SB_4382| Best HMM Match : Lectin_C (HMM E-Value=3.8e-22)
Length = 492
Score = 32.3 bits (70), Expect = 0.24
Identities = 24/85 (28%), Positives = 32/85 (37%)
Frame = +3
Query: 204 KKWVDAKKTCEMEGATFFYPDDKFEFDAVTTYWNTTQPFEWISIGISSQTAKGVFETVDG 383
K W DA+ C G + K E + V+ + W IG+ F VDG
Sbjct: 385 KNWYDAESMCRDLGGYLVKIESKSEDEFVSRELALPENLVW--IGLMRSVINDSFVWVDG 442
Query: 384 VSIMDVYNKWKPGEPNDSHNNEDCV 458
M Y W GEP + + CV
Sbjct: 443 --SMAKYTNWGVGEPIVAGIGKHCV 465
>SB_24529| Best HMM Match : Lectin_C (HMM E-Value=3.4e-27)
Length = 644
Score = 31.5 bits (68), Expect = 0.43
Identities = 19/59 (32%), Positives = 29/59 (49%), Gaps = 2/59 (3%)
Frame = +3
Query: 333 IGISSQTAKGVFETVDGVSIMDVYNKWKPGEPNDSHNNEDCV-VIHRNDGL-MNDDDCA 503
+G+S +G F DG + W P +PN+ + N+DCV + N G ND C+
Sbjct: 309 VGLSDVATEGRFVWADGSPTN--FTNWAPNQPNE-YKNQDCVHTLGVNYGYEWNDVQCS 364
>SB_48878| Best HMM Match : Fibrinogen_C (HMM E-Value=0)
Length = 1213
Score = 30.3 bits (65), Expect = 0.98
Identities = 16/43 (37%), Positives = 22/43 (51%)
Frame = +3
Query: 333 IGISSQTAKGVFETVDGVSIMDVYNKWKPGEPNDSHNNEDCVV 461
IG++ A+G +E DG Y KW GEPN N + V+
Sbjct: 812 IGLNDNRAEGEWEWHDGTRAK--YVKWITGEPNGGTANNNAVL 852
>SB_36763| Best HMM Match : EGF (HMM E-Value=1.7e-06)
Length = 155
Score = 30.3 bits (65), Expect = 0.98
Identities = 14/36 (38%), Positives = 19/36 (52%), Gaps = 4/36 (11%)
Frame = +3
Query: 411 WKPGEPNDSHNNEDCVVIH----RNDGLMNDDDCAK 506
W EPN+ +N+DCV I+ G ND+ C K
Sbjct: 7 WAAREPNNRGSNQDCVEIYIKRPSEAGKWNDEPCTK 42
>SB_49537| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 195
Score = 29.1 bits (62), Expect = 2.3
Identities = 17/44 (38%), Positives = 24/44 (54%), Gaps = 2/44 (4%)
Frame = +3
Query: 327 ISIGISSQTAKGVFETVDGVSIMDVYNKWKPGEPNDS--HNNED 452
IS I ++ G VDG+ +DV++ WK EP DS H E+
Sbjct: 9 ISANIGTKAGTGPPLEVDGIDKLDVHHIWK--EPGDSKAHTEEN 50
>SB_40810| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 210
Score = 29.1 bits (62), Expect = 2.3
Identities = 19/57 (33%), Positives = 24/57 (42%), Gaps = 10/57 (17%)
Frame = +3
Query: 324 WISIGISSQTAKGVFETV--DGVSIMDVYNKWKPGEPNDSH--------NNEDCVVI 464
WI + ++ V+ V D S Y +W GEPND H EDCV I
Sbjct: 75 WIGLNDRAEAGTYVWNDVGVDQFSNKATYFRWDTGEPNDKHYDRLLPRCTGEDCVQI 131
>SB_44272| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1128
Score = 28.7 bits (61), Expect = 3.0
Identities = 13/31 (41%), Positives = 16/31 (51%)
Frame = +3
Query: 396 DVYNKWKPGEPNDSHNNEDCVVIHRNDGLMN 488
D W PGE DSH ++D V I + MN
Sbjct: 402 DTETDWTPGEWKDSHEDDDYVNISIYNDAMN 432
>SB_52733| Best HMM Match : DUF948 (HMM E-Value=0.37)
Length = 1147
Score = 28.3 bits (60), Expect = 4.0
Identities = 12/34 (35%), Positives = 20/34 (58%)
Frame = -2
Query: 491 IVHKSVISMDDDAIFVVMRVVGLARLPFVIHVHY 390
+V + I +D A F++ RV+ L R PF + +Y
Sbjct: 266 LVKREKILNEDKASFIIRRVIILRRTPFRMRAYY 299
>SB_46952| Best HMM Match : Gemini_AL2 (HMM E-Value=1.3)
Length = 258
Score = 28.3 bits (60), Expect = 4.0
Identities = 22/66 (33%), Positives = 30/66 (45%), Gaps = 2/66 (3%)
Frame = -2
Query: 401 HVHYGDTINSFEDSFGRLR*DPDTDPFEGLCRVPISGH--SIEFKLVIRVKESSPLHFAS 228
H YG +N FE+ L + P L H SI+F+ + ESSP FAS
Sbjct: 145 HYLYGPKLNRFENDVEEL--EIVVSPPSRLENNLSGNHRSSIKFEHLPEENESSPSDFAS 202
Query: 227 LLSVHP 210
L ++ P
Sbjct: 203 LTNIRP 208
>SB_58178| Best HMM Match : UBACT (HMM E-Value=1.7e-34)
Length = 1236
Score = 28.3 bits (60), Expect = 4.0
Identities = 13/42 (30%), Positives = 25/42 (59%)
Frame = -3
Query: 388 ETPSTVSKTPLAVCDEIPILIHSKGCVVFQ*VVTASNSNLSS 263
++ +T + TP C+++ ++IH +GC V Q + N +L S
Sbjct: 899 QSGTTGNPTPSPSCNDLRVIIHVEGC-VHQHALLVRNRSLDS 939
>SB_46133| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 264
Score = 27.9 bits (59), Expect = 5.3
Identities = 13/35 (37%), Positives = 18/35 (51%)
Frame = -3
Query: 418 GFHLLYTSIMETPSTVSKTPLAVCDEIPILIHSKG 314
G+H Y +TP+T K VC IP H++G
Sbjct: 36 GYHHCYNG-KDTPATCPKNTRCVCMGIPCSTHNQG 69
>SB_8405| Best HMM Match : PAN (HMM E-Value=0.044)
Length = 387
Score = 27.9 bits (59), Expect = 5.3
Identities = 11/41 (26%), Positives = 23/41 (56%)
Frame = +3
Query: 288 VTTYWNTTQPFEWISIGISSQTAKGVFETVDGVSIMDVYNK 410
+ TYW T PF+ + +G+ + T + +G+S++ + K
Sbjct: 219 LATYWGT--PFDRLCLGMKNTTTNWIAVPHEGISLLTLIKK 257
>SB_18087| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 121
Score = 27.9 bits (59), Expect = 5.3
Identities = 11/24 (45%), Positives = 17/24 (70%)
Frame = +3
Query: 429 NDSHNNEDCVVIHRNDGLMNDDDC 500
ND+++ +DC+V + ND ND DC
Sbjct: 67 NDNNSGDDCIV-NDNDNHDNDGDC 89
>SB_50950| Best HMM Match : AAA_5 (HMM E-Value=0.0006)
Length = 1552
Score = 27.1 bits (57), Expect = 9.2
Identities = 16/42 (38%), Positives = 23/42 (54%), Gaps = 4/42 (9%)
Frame = +3
Query: 135 KFFRKDYTYIEST----ESFYKIHTLYKKWVDAKKTCEMEGA 248
K+ R +Y +ES E + K+ T KW A+K C M+GA
Sbjct: 710 KWERTEYPEVESITKAIEPYQKLFTTVMKWQRAEKKC-MDGA 750
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,293,320
Number of Sequences: 59808
Number of extensions: 312699
Number of successful extensions: 865
Number of sequences better than 10.0: 36
Number of HSP's better than 10.0 without gapping: 772
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 860
length of database: 16,821,457
effective HSP length: 77
effective length of database: 12,216,241
effective search space used: 1148326654
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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