Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= epV30453
(516 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_16011| Best HMM Match : Sugar_tr (HMM E-Value=0) 60 1e-09
SB_2499| Best HMM Match : Sugar_tr (HMM E-Value=1e-28) 59 2e-09
SB_35860| Best HMM Match : Sugar_tr (HMM E-Value=1e-04) 38 0.006
SB_7879| Best HMM Match : Sugar_tr (HMM E-Value=0.03) 36 0.015
SB_1462| Best HMM Match : MFS_1 (HMM E-Value=0.042) 34 0.080
SB_18704| Best HMM Match : MFS_1 (HMM E-Value=0.034) 33 0.11
SB_15716| Best HMM Match : ABC_tran (HMM E-Value=0) 33 0.14
SB_37752| Best HMM Match : MFS_1 (HMM E-Value=0.11) 30 0.98
SB_34212| Best HMM Match : EGF (HMM E-Value=1.1e-05) 30 1.3
SB_42090| Best HMM Match : Ldl_recept_a (HMM E-Value=0.54) 30 1.3
SB_2808| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 1.3
SB_37206| Best HMM Match : MFS_1 (HMM E-Value=3.4e-17) 29 1.7
SB_20421| Best HMM Match : Xlink (HMM E-Value=1.5e-18) 29 1.7
SB_11833| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 1.7
SB_6080| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 2.3
SB_59015| Best HMM Match : Arif-1 (HMM E-Value=0.62) 29 3.0
SB_10056| Best HMM Match : RNA_pol_Rpb1_R (HMM E-Value=7.7e-05) 29 3.0
SB_19088| Best HMM Match : PSGP (HMM E-Value=2.5) 28 4.0
SB_41020| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 5.3
SB_34931| Best HMM Match : C4dic_mal_tran (HMM E-Value=0.46) 28 5.3
SB_31513| Best HMM Match : Transgly_assoc (HMM E-Value=0.49) 27 6.9
SB_16978| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 6.9
SB_15062| Best HMM Match : Tctex-1 (HMM E-Value=9.8e-19) 27 6.9
SB_12467| Best HMM Match : Ank (HMM E-Value=3.2e-10) 27 6.9
SB_45157| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 9.2
>SB_16011| Best HMM Match : Sugar_tr (HMM E-Value=0)
Length = 512
Score = 60.1 bits (139), Expect = 1e-09
Identities = 33/122 (27%), Positives = 60/122 (49%), Gaps = 1/122 (0%)
Frame = +2
Query: 143 AISMAQFGLVFGITAILIPQLQSQ-KRVMLIDESTESWIAAIPGFALLFGNFTIPTIMGK 319
A+ FG G ++ + L ++ K + + S SW +++ + G +
Sbjct: 52 ALGPLSFGFCLGYSSSALEDLIAESKESVKLTVSQGSWFSSLVTLGAILGAPLGGWTLEY 111
Query: 320 YGRKVANIISVLPVIVGWLLITSASNTYFILAARFLQGISMGMSTSLGPILIGEYTSPKY 499
+GRK + +P VGW+LI A++ Y + RF+ G+++GM + P+ I E +SP
Sbjct: 112 FGRKGTIMACAVPFEVGWMLIAYANSHYMLYIGRFITGLAVGMVSLTVPVYIAEISSPSL 171
Query: 500 RG 505
RG
Sbjct: 172 RG 173
>SB_2499| Best HMM Match : Sugar_tr (HMM E-Value=1e-28)
Length = 456
Score = 59.3 bits (137), Expect = 2e-09
Identities = 35/123 (28%), Positives = 58/123 (47%), Gaps = 1/123 (0%)
Frame = +2
Query: 143 AISMAQFGLVFGITAILIPQLQSQKRVMLIDESTE-SWIAAIPGFALLFGNFTIPTIMGK 319
A+ FG G ++ QL+++ L + E +W ++ + G ++
Sbjct: 48 ALGPLSFGYCMGYSSAATTQLENKNATDLYLNADEITWFGSLLNIGAMLGGPIQGFLIDL 107
Query: 320 YGRKVANIISVLPVIVGWLLITSASNTYFILAARFLQGISMGMSTSLGPILIGEYTSPKY 499
GRK A I++ +P GWLLI N + A RF+ G+ +GM++ P+ I E S
Sbjct: 108 IGRKFALILTSVPFCSGWLLIGFGKNAAMLNAGRFMSGLGVGMASLNVPVYISETASFSN 167
Query: 500 RGA 508
RGA
Sbjct: 168 RGA 170
>SB_35860| Best HMM Match : Sugar_tr (HMM E-Value=1e-04)
Length = 544
Score = 37.5 bits (83), Expect = 0.006
Identities = 29/96 (30%), Positives = 45/96 (46%), Gaps = 3/96 (3%)
Frame = +2
Query: 224 MLIDESTESWIA-AIPGFALLFGNFTIPTIMGKYGRKVANIISVLPVIVGWLLITSASNT 400
++ + S+ SW +I LFGN + KYGR+ IS +V W+ S+
Sbjct: 85 LVCEYSSLSWATNSIMFTGWLFGNIVFGILSDKYGRRKVLFIS--SCMVCWVAFASSFVP 142
Query: 401 YFILAA--RFLQGISMGMSTSLGPILIGEYTSPKYR 502
Y+ L A RF G +G S + I+ E+ P+ R
Sbjct: 143 YYWLYAVFRFFIGFGLGGSIVILFIMATEFVGPQKR 178
>SB_7879| Best HMM Match : Sugar_tr (HMM E-Value=0.03)
Length = 201
Score = 36.3 bits (80), Expect = 0.015
Identities = 23/79 (29%), Positives = 39/79 (49%), Gaps = 3/79 (3%)
Frame = +2
Query: 281 LFGNFTIPTIMGKYGRKVANIISVLPVIVGWLLITS---ASNTYFILAARFLQGISMGMS 451
+ G P ++GRK + + + IVG LL+ A + + RF+ GI+ GM+
Sbjct: 1 MIGALAGPLFANRFGRKRSLLANNGLAIVGALLMFLSYFAKTSPLLTVGRFVIGINCGMN 60
Query: 452 TSLGPILIGEYTSPKYRGA 508
T++ PI + E RG+
Sbjct: 61 TAIAPIYLSELAPIHLRGS 79
>SB_1462| Best HMM Match : MFS_1 (HMM E-Value=0.042)
Length = 277
Score = 33.9 bits (74), Expect = 0.080
Identities = 19/74 (25%), Positives = 35/74 (47%)
Frame = +2
Query: 281 LFGNFTIPTIMGKYGRKVANIISVLPVIVGWLLITSASNTYFILAARFLQGISMGMSTSL 460
LFG+F T+ +GRK+ +SV ++ + ++ ++ F G+S+ S +
Sbjct: 157 LFGSFLSGTVSDAFGRKITLTVSVALQAAAFIGASFVTSHIALIILLFFAGLSLASSIAC 216
Query: 461 GPILIGEYTSPKYR 502
LI E P +R
Sbjct: 217 QYTLIIEMIGPDHR 230
>SB_18704| Best HMM Match : MFS_1 (HMM E-Value=0.034)
Length = 363
Score = 33.5 bits (73), Expect = 0.11
Identities = 19/74 (25%), Positives = 35/74 (47%)
Frame = +2
Query: 281 LFGNFTIPTIMGKYGRKVANIISVLPVIVGWLLITSASNTYFILAARFLQGISMGMSTSL 460
LFG+F T+ +GRK+ +SV ++ + ++ ++ F G+S+ S +
Sbjct: 160 LFGSFLSGTVSDAFGRKITLTVSVALQAAAFIGASFVTSHIALIILIFFAGLSLASSIAC 219
Query: 461 GPILIGEYTSPKYR 502
LI E P +R
Sbjct: 220 QYTLIIEMIGPDHR 233
>SB_15716| Best HMM Match : ABC_tran (HMM E-Value=0)
Length = 1702
Score = 33.1 bits (72), Expect = 0.14
Identities = 31/129 (24%), Positives = 53/129 (41%), Gaps = 5/129 (3%)
Frame = +2
Query: 56 LLFFVFSFHNKMVRWITPFVKQCFVTSGVAISMAQFGLVFGITAILIPQLQSQKRVMLID 235
++FFV MVRW F+ + + V ++ + IT + + + V + +
Sbjct: 80 IIFFVTYLPYTMVRWFEAFMNSSQIAAAVFMNSPKIAAAVSITEVFMNSTKIAAAVNITE 139
Query: 236 ESTES-WIAAIPGFALLFGNFT-IPTIMGKYGRKVANIISVLPVIVGWLLITSA---SNT 400
S IAA +F N T I + K+A +S+ V + I +A S T
Sbjct: 140 VFMNSNKIAAAVSITEVFMNCTKIAAAVFMNSPKIAAAVSITEVFMNCTKIATACLSSTT 199
Query: 401 YFILAARFL 427
F +A +L
Sbjct: 200 AFGVACNYL 208
>SB_37752| Best HMM Match : MFS_1 (HMM E-Value=0.11)
Length = 302
Score = 30.3 bits (65), Expect = 0.98
Identities = 18/74 (24%), Positives = 35/74 (47%)
Frame = +2
Query: 281 LFGNFTIPTIMGKYGRKVANIISVLPVIVGWLLITSASNTYFILAARFLQGISMGMSTSL 460
LFG+ T+ +GRK++ +SV ++ + ++ ++ F G+S+ S +
Sbjct: 66 LFGSLLSGTLSDAFGRKISLTVSVALQAAAFIGASFVTSHTALIILIFFAGLSIASSIAC 125
Query: 461 GPILIGEYTSPKYR 502
LI E P +R
Sbjct: 126 QYTLIIEMIGPDHR 139
>SB_34212| Best HMM Match : EGF (HMM E-Value=1.1e-05)
Length = 178
Score = 29.9 bits (64), Expect = 1.3
Identities = 11/24 (45%), Positives = 16/24 (66%)
Frame = -3
Query: 454 CAHSHRDPLKKSCSQDEVCVGGAC 383
CA + RDPL+ +C +D+ C G C
Sbjct: 88 CARASRDPLQSAC-EDKPCKNGTC 110
>SB_42090| Best HMM Match : Ldl_recept_a (HMM E-Value=0.54)
Length = 282
Score = 29.9 bits (64), Expect = 1.3
Identities = 21/67 (31%), Positives = 28/67 (41%)
Frame = +1
Query: 64 FCFFIS*QNGEMDHAICEAVLRNIRCGYQHGAVRSRLWYHRDPDTAAAVTKTCNADRRIH 243
F FFIS N C++ IRC ++ LW R PD + +T C I
Sbjct: 23 FDFFISGNNIRRARYNCKSF--GIRCN----SINRHLWRDRKPDCVSNITTECGC--VIV 74
Query: 244 RVLDSCY 264
+D CY
Sbjct: 75 TTMDGCY 81
>SB_2808| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 314
Score = 29.9 bits (64), Expect = 1.3
Identities = 14/47 (29%), Positives = 25/47 (53%), Gaps = 1/47 (2%)
Frame = +1
Query: 262 YTWFRAVIW*LHYTYHHGQIWTKSRQHHQCSAR-NRRLAVNHKRLQH 399
+ W+R V L ++Y +G++W+ R+ C A L + H R+ H
Sbjct: 9 HQWYRPVS--LKWSYANGKVWSSDRKKVACKANIYDALTLAHTRIAH 53
>SB_37206| Best HMM Match : MFS_1 (HMM E-Value=3.4e-17)
Length = 1088
Score = 29.5 bits (63), Expect = 1.7
Identities = 25/105 (23%), Positives = 44/105 (41%), Gaps = 2/105 (1%)
Frame = +2
Query: 167 LVFGITAILI-PQLQSQKRVMLIDESTESWIAAIPGFALLFGNFTIPTIMGKYGRKVANI 343
L FG+ A +I P L V ++ WI + LFG+ + +Y + +
Sbjct: 612 LTFGMAAAVIGPTLLELGCVTSRPVNSMGWIFFSQALSALFGSSISGIMADRYDCNIILV 671
Query: 344 ISVLPVIVGWLLITSASNTYFILAARFLQGISMG-MSTSLGPILI 475
+ V V + +I S +L+ G++MG + T +LI
Sbjct: 672 VCVACVAISLTVIPLCSQFQLMLSVFAFLGVNMGIIDTVANSVLI 716
>SB_20421| Best HMM Match : Xlink (HMM E-Value=1.5e-18)
Length = 154
Score = 29.5 bits (63), Expect = 1.7
Identities = 15/48 (31%), Positives = 23/48 (47%)
Frame = -1
Query: 207 CSCGIRIAVIPKTRPNCAMLIATPDVTKHCFTNGVIHLTILL*NEKTK 64
C+CG+ I V+P NCA+ PD+ G + L EK++
Sbjct: 25 CNCGLEIRVVPFLNANCAV---DPDLVGDYKGKGTYNKVFYLSGEKSR 69
>SB_11833| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 636
Score = 29.5 bits (63), Expect = 1.7
Identities = 28/102 (27%), Positives = 50/102 (49%), Gaps = 3/102 (2%)
Frame = +2
Query: 206 QSQKRVMLIDESTESWIAAIPGFAL-LFGNFTIPTIMGKYGRKVANIISVL-PVIVGWLL 379
Q ++ ++ +S + IA F L +FG I K+GRK+ V+ + G L
Sbjct: 239 QGKQWDLVCSKSMYATIANSITFILWIFGAMAGSIISDKFGRKIVVFPCVIFASLCG--L 296
Query: 380 ITSASNTYFILAA-RFLQGISMGMSTSLGPILIGEYTSPKYR 502
++ +N Y++ A R L G +G + G +L+ EY ++R
Sbjct: 297 ASAFANKYWVFALFRALLGAGIGGYSICGFVLVMEYIGIRHR 338
>SB_6080| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 2101
Score = 29.1 bits (62), Expect = 2.3
Identities = 13/31 (41%), Positives = 18/31 (58%)
Frame = -1
Query: 297 VKLPNNSAKPGIAAIQDSVDSSISITRFCDC 205
+KLP KPGI IQD +D S+ + +C
Sbjct: 779 IKLPMARPKPGICPIQDYIDPSLCKSTRDEC 809
>SB_59015| Best HMM Match : Arif-1 (HMM E-Value=0.62)
Length = 526
Score = 28.7 bits (61), Expect = 3.0
Identities = 24/102 (23%), Positives = 42/102 (41%), Gaps = 5/102 (4%)
Frame = +1
Query: 142 GYQHGAVRSRLWYHRDPDTAAAVTKTCNADRRIHRVLDSC---YTWFRAVIW*LHYTY-- 306
G HGA+R+ + D A+ RR+ V+ +C + W+R V+ L +
Sbjct: 188 GVCHGAIRTLGAHGPDDKMCNAMPLLTKTKRRLRTVVFNCRSLWCWYRLVLPILAVSRLG 247
Query: 307 HHGQIWTKSRQHHQCSARNRRLAVNHKRLQHILHLGCKISSR 432
HG + + HH+ + + + R H L +SR
Sbjct: 248 QHGHVRLYNTIHHRPTGNAAQTMICASRNSHTLSRNDHSTSR 289
>SB_10056| Best HMM Match : RNA_pol_Rpb1_R (HMM E-Value=7.7e-05)
Length = 1960
Score = 28.7 bits (61), Expect = 3.0
Identities = 21/79 (26%), Positives = 38/79 (48%), Gaps = 3/79 (3%)
Frame = -1
Query: 351 TLMMLATFRPYLPMMVGIVKLPNNSA---KPGIAAIQDSVDSSISITRFCDCSCGIRIAV 181
T+++ +T PY M + + +A P A ++DSS+S+TR S + ++
Sbjct: 1706 TMILPSTSVPYNTMFIPAPNATSTAATTMSPSYVANMTTLDSSVSLTRSL-LSTTLIPSI 1764
Query: 180 IPKTRPNCAMLIATPDVTK 124
P +IATP+ T+
Sbjct: 1765 STSILPYNTTVIATPNTTR 1783
Score = 27.9 bits (59), Expect = 5.3
Identities = 20/79 (25%), Positives = 38/79 (48%), Gaps = 3/79 (3%)
Frame = -1
Query: 351 TLMMLATFRPYLPMMVGIVKLPNNSA---KPGIAAIQDSVDSSISITRFCDCSCGIRIAV 181
T+++ +T PY ++ + +A P A ++DSS+S+TR S + ++
Sbjct: 98 TMILPSTSVPYNTTLIPAPNATSTAATTMSPSYVANMTTLDSSVSLTR-SSLSTTLIPSI 156
Query: 180 IPKTRPNCAMLIATPDVTK 124
P +IATP+ T+
Sbjct: 157 STSILPYNTTVIATPNTTR 175
Score = 27.9 bits (59), Expect = 5.3
Identities = 20/79 (25%), Positives = 38/79 (48%), Gaps = 3/79 (3%)
Frame = -1
Query: 351 TLMMLATFRPYLPMMVGIVKLPNNSA---KPGIAAIQDSVDSSISITRFCDCSCGIRIAV 181
T+++ +T PY ++ + +A P A ++DSS+S+TR S + ++
Sbjct: 299 TMILPSTSVPYNTTLIPAPNATSTAATTMSPSYVANMTTLDSSVSLTR-SSLSTTLIPSI 357
Query: 180 IPKTRPNCAMLIATPDVTK 124
P +IATP+ T+
Sbjct: 358 STSILPYNTTVIATPNTTR 376
Score = 27.1 bits (57), Expect = 9.2
Identities = 20/79 (25%), Positives = 38/79 (48%), Gaps = 3/79 (3%)
Frame = -1
Query: 351 TLMMLATFRPYLPMMVGIVKLPNNSA---KPGIAAIQDSVDSSISITRFCDCSCGIRIAV 181
T+++ +T PY ++ + +A P A ++DSS+S+TR S + ++
Sbjct: 1103 TMILPSTSVPYNTTLIPAPNATSTAATTMSPSYVANMTTLDSSVSLTRSL-LSTTLIPSI 1161
Query: 180 IPKTRPNCAMLIATPDVTK 124
P +IATP+ T+
Sbjct: 1162 STSMLPYNTTVIATPNTTR 1180
>SB_19088| Best HMM Match : PSGP (HMM E-Value=2.5)
Length = 737
Score = 28.3 bits (60), Expect = 4.0
Identities = 20/79 (25%), Positives = 38/79 (48%), Gaps = 3/79 (3%)
Frame = -1
Query: 351 TLMMLATFRPYLPMMVGIVKLPNNSA---KPGIAAIQDSVDSSISITRFCDCSCGIRIAV 181
T++ +T PY ++ + +A P A ++DSS+S+TR S + ++
Sbjct: 611 TMIFPSTSVPYNTTLIPAPNATSTAATTMSPSYVANMTTLDSSVSLTR-SSLSTTLIPSI 669
Query: 180 IPKTRPNCAMLIATPDVTK 124
P+ +IATP+ T+
Sbjct: 670 STSILPHNTTVIATPNTTR 688
Score = 27.9 bits (59), Expect = 5.3
Identities = 20/79 (25%), Positives = 38/79 (48%), Gaps = 3/79 (3%)
Frame = -1
Query: 351 TLMMLATFRPYLPMMVGIVKLPNNSA---KPGIAAIQDSVDSSISITRFCDCSCGIRIAV 181
T+++ +T PY ++ + +A P A ++DSS+S+TR S + ++
Sbjct: 410 TMILHSTSVPYNTTLIPAPNATSTAATTMSPSYVANMTTLDSSVSLTR-SSLSTTLIPSI 468
Query: 180 IPKTRPNCAMLIATPDVTK 124
P +IATP+ T+
Sbjct: 469 STSILPYNTTVIATPNTTR 487
>SB_41020| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1229
Score = 27.9 bits (59), Expect = 5.3
Identities = 20/79 (25%), Positives = 38/79 (48%), Gaps = 3/79 (3%)
Frame = -1
Query: 351 TLMMLATFRPYLPMMVGIVKLPNNSA---KPGIAAIQDSVDSSISITRFCDCSCGIRIAV 181
T+++ +T PY ++ + +A P A ++DSS+S+TR S + ++
Sbjct: 98 TMILPSTSVPYNTTLIPAPNATSTAATTMSPSYVANMTTLDSSVSLTR-SSLSTTLIPSI 156
Query: 180 IPKTRPNCAMLIATPDVTK 124
P +IATP+ T+
Sbjct: 157 STSILPYNTTVIATPNTTR 175
Score = 27.9 bits (59), Expect = 5.3
Identities = 20/79 (25%), Positives = 38/79 (48%), Gaps = 3/79 (3%)
Frame = -1
Query: 351 TLMMLATFRPYLPMMVGIVKLPNNSA---KPGIAAIQDSVDSSISITRFCDCSCGIRIAV 181
T+++ +T PY ++ + +A P A ++DSS+S+TR S + ++
Sbjct: 299 TMILPSTSVPYNTTLIPAPNATSTAATTMSPSYVANMTTLDSSVSLTR-SSLSTTLIPSI 357
Query: 180 IPKTRPNCAMLIATPDVTK 124
P +IATP+ T+
Sbjct: 358 STSILPYNTTVIATPNTTR 376
Score = 27.1 bits (57), Expect = 9.2
Identities = 20/79 (25%), Positives = 38/79 (48%), Gaps = 3/79 (3%)
Frame = -1
Query: 351 TLMMLATFRPYLPMMVGIVKLPNNSA---KPGIAAIQDSVDSSISITRFCDCSCGIRIAV 181
T+++ +T PY ++ + +A P A ++DSS+S+TR S + ++
Sbjct: 500 TMILPSTSVPYNTTLIPAPNATSTAATTMSPSYVANMTTLDSSVSLTRSL-LSTTLIPSI 558
Query: 180 IPKTRPNCAMLIATPDVTK 124
P +IATP+ T+
Sbjct: 559 STSILPYNTTVIATPNTTR 577
Score = 27.1 bits (57), Expect = 9.2
Identities = 20/79 (25%), Positives = 38/79 (48%), Gaps = 3/79 (3%)
Frame = -1
Query: 351 TLMMLATFRPYLPMMVGIVKLPNNSA---KPGIAAIQDSVDSSISITRFCDCSCGIRIAV 181
T+++ +T PY ++ + +A P A ++DSS+S+TR S + ++
Sbjct: 701 TMILPSTSVPYNTTLIPAPNATSTAATTMSPSYVANMTTLDSSVSLTRSL-LSTTLIPSI 759
Query: 180 IPKTRPNCAMLIATPDVTK 124
P +IATP+ T+
Sbjct: 760 STSILPYNTTVIATPNTTR 778
>SB_34931| Best HMM Match : C4dic_mal_tran (HMM E-Value=0.46)
Length = 572
Score = 27.9 bits (59), Expect = 5.3
Identities = 20/79 (25%), Positives = 38/79 (48%), Gaps = 3/79 (3%)
Frame = -1
Query: 351 TLMMLATFRPYLPMMVGIVKLPNNSA---KPGIAAIQDSVDSSISITRFCDCSCGIRIAV 181
T+++ +T PY ++ + +A P A ++DSS+S+TR S + ++
Sbjct: 282 TMILPSTSVPYNTTLIPAPNATSTAATTMSPSYVANMTTLDSSVSLTR-SSLSTTLIPSI 340
Query: 180 IPKTRPNCAMLIATPDVTK 124
P +IATP+ T+
Sbjct: 341 STSILPYNTTVIATPNTTR 359
Score = 27.1 bits (57), Expect = 9.2
Identities = 20/79 (25%), Positives = 37/79 (46%), Gaps = 3/79 (3%)
Frame = -1
Query: 351 TLMMLATFRPYLPMMVGIVKLPNNSA---KPGIAAIQDSVDSSISITRFCDCSCGIRIAV 181
T+++ T PY ++ + +A P A ++DSS+S+TR S + ++
Sbjct: 81 TMILPLTSVPYNTTLIPAPNATSTAATTMSPSYVANMTTLDSSVSLTR-SSLSTTLIPSI 139
Query: 180 IPKTRPNCAMLIATPDVTK 124
P +IATP+ T+
Sbjct: 140 STSILPYNTTVIATPNTTR 158
>SB_31513| Best HMM Match : Transgly_assoc (HMM E-Value=0.49)
Length = 340
Score = 27.5 bits (58), Expect = 6.9
Identities = 21/63 (33%), Positives = 32/63 (50%), Gaps = 3/63 (4%)
Frame = +2
Query: 299 IPTIMGKYGRKVANIISVLPVIVGWLLITSASNTYFILAARFLQGISMGMST---SLGPI 469
+ I KYG VA +++ + V++G +I S NT A+ G+ G+ T LG I
Sbjct: 238 VKAIFKKYGFTVAAVVTAVGVVIG--VIVSNLNTGLTSVAK---GVGDGLKTIGKKLGEI 292
Query: 470 LIG 478
L G
Sbjct: 293 LPG 295
>SB_16978| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 875
Score = 27.5 bits (58), Expect = 6.9
Identities = 16/44 (36%), Positives = 22/44 (50%), Gaps = 2/44 (4%)
Frame = +2
Query: 389 ASNTYFI--LAARFLQGISMGMSTSLGPILIGEYTSPKYRGAFL 514
A ++Y I + A+ L G +LGP I E SPKY +L
Sbjct: 365 ADSSYMIVFIFAQLLSGAGTTPLHTLGPAYIDENVSPKYSSFYL 408
>SB_15062| Best HMM Match : Tctex-1 (HMM E-Value=9.8e-19)
Length = 851
Score = 27.5 bits (58), Expect = 6.9
Identities = 11/26 (42%), Positives = 16/26 (61%)
Frame = -3
Query: 367 DDYGQNTDDVGDFSSIFAHDGRYSEV 290
DD ++TDD+ DFS+ RYS +
Sbjct: 187 DDDDEDTDDIPDFSNFSTCSPRYSRI 212
>SB_12467| Best HMM Match : Ank (HMM E-Value=3.2e-10)
Length = 444
Score = 27.5 bits (58), Expect = 6.9
Identities = 10/20 (50%), Positives = 15/20 (75%)
Frame = -3
Query: 205 QLRYQDRGDTKDETELRHAD 146
+L+Y D GD D+++LRH D
Sbjct: 58 RLQYLDEGDMLDDSDLRHND 77
>SB_45157| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 2870
Score = 27.1 bits (57), Expect = 9.2
Identities = 17/58 (29%), Positives = 27/58 (46%), Gaps = 1/58 (1%)
Frame = -1
Query: 282 NSAKPGIAAIQDSVDSSISITRFCDCSCGIRIAVIPKTRPNCAMLIATPDV-TKHCFT 112
++ KPG I+DSV S+ + C +C + +P C + + P V K C T
Sbjct: 1750 SACKPGCITIEDSVTVSLGNDKLCPEACLTK--CLPSCPSTCCIKNSPPVVCPKSCET 1805
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,694,815
Number of Sequences: 59808
Number of extensions: 351676
Number of successful extensions: 1119
Number of sequences better than 10.0: 25
Number of HSP's better than 10.0 without gapping: 1027
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1108
length of database: 16,821,457
effective HSP length: 77
effective length of database: 12,216,241
effective search space used: 1148326654
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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