Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= epV30448
         (516 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

EU019713-1|ABU25225.1|  528|Tribolium castaneum chitin deacetyla...    23   1.6  
EU019712-1|ABU25224.1|  535|Tribolium castaneum chitin deacetyla...    23   1.6  
EU019711-1|ABU25223.1|  534|Tribolium castaneum chitin deacetyla...    21   4.9  
AM292378-1|CAL23190.2|  387|Tribolium castaneum gustatory recept...    21   4.9  
AM292369-1|CAL23181.1|  408|Tribolium castaneum gustatory recept...    21   8.6  

>EU019713-1|ABU25225.1|  528|Tribolium castaneum chitin deacetylase
           2B protein.
          Length = 528

 Score = 23.0 bits (47), Expect = 1.6
 Identities = 11/23 (47%), Positives = 12/23 (52%)
 Frame = +2

Query: 275 RYNPIAVLIRKTKFISRSYLNVS 343
           R NP    IR T F+S  Y N S
Sbjct: 211 RANPNGCQIRGTFFVSHKYTNYS 233


>EU019712-1|ABU25224.1|  535|Tribolium castaneum chitin deacetylase
           2A protein.
          Length = 535

 Score = 23.0 bits (47), Expect = 1.6
 Identities = 11/23 (47%), Positives = 12/23 (52%)
 Frame = +2

Query: 275 RYNPIAVLIRKTKFISRSYLNVS 343
           R NP    IR T F+S  Y N S
Sbjct: 218 RANPNGCQIRGTFFVSHKYTNYS 240


>EU019711-1|ABU25223.1|  534|Tribolium castaneum chitin deacetylase
           1 protein.
          Length = 534

 Score = 21.4 bits (43), Expect = 4.9
 Identities = 10/23 (43%), Positives = 12/23 (52%)
 Frame = +2

Query: 275 RYNPIAVLIRKTKFISRSYLNVS 343
           R NP    I+ T F+S  Y N S
Sbjct: 219 RKNPNGCDIKATFFVSHKYTNYS 241


>AM292378-1|CAL23190.2|  387|Tribolium castaneum gustatory receptor
           candidate 57 protein.
          Length = 387

 Score = 21.4 bits (43), Expect = 4.9
 Identities = 7/12 (58%), Positives = 10/12 (83%)
 Frame = -2

Query: 389 FLFFITKSFTYY 354
           F ++I +SFTYY
Sbjct: 144 FQYYIGRSFTYY 155


>AM292369-1|CAL23181.1|  408|Tribolium castaneum gustatory receptor
           candidate 48 protein.
          Length = 408

 Score = 20.6 bits (41), Expect = 8.6
 Identities = 6/16 (37%), Positives = 9/16 (56%)
 Frame = -2

Query: 392 YFLFFITKSFTYYKEH 345
           YF++  T  + YY  H
Sbjct: 149 YFIYLFTVYYIYYSVH 164


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 103,030
Number of Sequences: 336
Number of extensions: 2098
Number of successful extensions: 5
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 5
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5
length of database: 122,585
effective HSP length: 53
effective length of database: 104,777
effective search space used: 12363686
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)