Bombyx BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= epV30447
         (516 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_Q5HNF3 Cluster: Cell wall surface anchor family protein...    36   0.41 
UniRef50_Q4AJ55 Cluster: Glycosyl transferase, group 1; n=1; Chl...    33   3.9  
UniRef50_Q5K6X7 Cluster: Cell division control protein 25, putat...    33   5.1  
UniRef50_A5FSC5 Cluster: Polynucleotide adenylyltransferase/meta...    32   8.9  
UniRef50_A2DQL9 Cluster: Putative uncharacterized protein; n=2; ...    32   8.9  

>UniRef50_Q5HNF3 Cluster: Cell wall surface anchor family protein;
            n=3; cellular organisms|Rep: Cell wall surface anchor
            family protein - Staphylococcus epidermidis (strain ATCC
            35984 / RP62A)
          Length = 3692

 Score = 36.3 bits (80), Expect = 0.41
 Identities = 18/59 (30%), Positives = 29/59 (49%)
 Frame = +1

Query: 199  NQSVVAEALAKTRKAVAESKANFTKSRSYSKQEHSNSGARSKTLERANTVQPTVSPKQN 375
            N     E  A+ RK V ++K     + + S  E   +GA++  LE+ N +QP+   K N
Sbjct: 1879 NNDATDEEKAEARKLVEKAKIEAKSNITNSDTEREVNGAKTNGLEKINNIQPSTQTKTN 1937


>UniRef50_Q4AJ55 Cluster: Glycosyl transferase, group 1; n=1;
           Chlorobium phaeobacteroides BS1|Rep: Glycosyl
           transferase, group 1 - Chlorobium phaeobacteroides BS1
          Length = 362

 Score = 33.1 bits (72), Expect = 3.9
 Identities = 19/55 (34%), Positives = 26/55 (47%), Gaps = 3/55 (5%)
 Frame = -1

Query: 231 FRQRLRHNTLIWSRRHRRWAFQFVVLHRLSVCLD---HEHN*KRRHSDNTIIKVL 76
           FR+RLR    +    H  W F +V L  L + LD    EHN   R     +++VL
Sbjct: 75  FRERLRRGERLIVHAHLTWPFYYVALASLFLSLDIVYTEHNTSNRRRGFRVLRVL 129


>UniRef50_Q5K6X7 Cluster: Cell division control protein 25,
           putative; n=2; Filobasidiella neoformans|Rep: Cell
           division control protein 25, putative - Cryptococcus
           neoformans (Filobasidiella neoformans)
          Length = 1368

 Score = 32.7 bits (71), Expect = 5.1
 Identities = 21/61 (34%), Positives = 28/61 (45%)
 Frame = +1

Query: 202 QSVVAEALAKTRKAVAESKANFTKSRSYSKQEHSNSGARSKTLERANTVQPTVSPKQNGL 381
           QS   + L   +  V   K N  K  S S Q H+ SG+ + T  RA+ +   V  K  GL
Sbjct: 689 QSANEQGLIHGQIGVHSPKFNPPKQPSTSSQTHTRSGSITSTASRASLLSDLVRRKVKGL 748

Query: 382 A 384
           A
Sbjct: 749 A 749


>UniRef50_A5FSC5 Cluster: Polynucleotide adenylyltransferase/metal
           dependent phosphohydrolase; n=3; Dehalococcoides|Rep:
           Polynucleotide adenylyltransferase/metal dependent
           phosphohydrolase - Dehalococcoides sp. BAV1
          Length = 498

 Score = 31.9 bits (69), Expect = 8.9
 Identities = 15/45 (33%), Positives = 24/45 (53%)
 Frame = +2

Query: 317 VLKLWKELTQCSRQSRPNKMVWPVLSHLLETLSATAVLRLMSVNP 451
           +L ++ EL  C R  +P +  W VL H ++T+ A   +   SV P
Sbjct: 224 LLSIFTELDPCYRHPQPYEHTWDVLEHSIKTIYALDAILGKSVWP 268


>UniRef50_A2DQL9 Cluster: Putative uncharacterized protein; n=2;
           Trichomonas vaginalis G3|Rep: Putative uncharacterized
           protein - Trichomonas vaginalis G3
          Length = 854

 Score = 31.9 bits (69), Expect = 8.9
 Identities = 17/54 (31%), Positives = 32/54 (59%)
 Frame = +1

Query: 211 VAEALAKTRKAVAESKANFTKSRSYSKQEHSNSGARSKTLERANTVQPTVSPKQ 372
           +AE+  K++K  A S+A+  +S S +  E +    + KT+ ++NT+ P  S K+
Sbjct: 617 IAESKPKSKKPRA-SRASNVESNSQADGESTTKKKKKKTIRKSNTILPEDSRKE 669


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 442,655,468
Number of Sequences: 1657284
Number of extensions: 7505381
Number of successful extensions: 26914
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 25385
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 26888
length of database: 575,637,011
effective HSP length: 95
effective length of database: 418,195,031
effective search space used: 31782822356
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)