Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= epV30445
         (516 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

11_01_0466 + 3607947-3610608,3610725-3611018,3611494-3611895,361...    29   1.7  
01_05_0463 + 22461169-22461216,22463153-22463248,22463334-224634...    28   3.9  
09_06_0112 + 20928910-20929200,20929757-20929869,20929970-209300...    27   8.9  

>11_01_0466 + 3607947-3610608,3610725-3611018,3611494-3611895,
            3611984-3612217,3614113-3614138,3614446-3614633,
            3615707-3617670,3617938-3618423,3618527-3618894
          Length = 2207

 Score = 29.5 bits (63), Expect = 1.7
 Identities = 11/26 (42%), Positives = 16/26 (61%)
 Frame = -2

Query: 212  IDPYH*ILIW**STHFCAHRNINVQL 135
            +DP H +L W  STHFC+   ++  L
Sbjct: 1328 LDPQHALLSWNDSTHFCSWEGVSCSL 1353


>01_05_0463 +
           22461169-22461216,22463153-22463248,22463334-22463446,
           22463479-22463494,22463939-22464031,22464118-22464261,
           22464508-22464596,22464687-22464792,22464874-22464961,
           22465585-22465703,22465788-22465952,22466235-22466404,
           22466488-22466597,22466682-22466791,22466886-22466996,
           22467082-22467183,22467266-22467471,22467563-22467881,
           22467983-22468093
          Length = 771

 Score = 28.3 bits (60), Expect = 3.9
 Identities = 14/41 (34%), Positives = 24/41 (58%), Gaps = 1/41 (2%)
 Frame = +2

Query: 98  LNTKIF*TGHEPIIGHLYFGGHKN-EYFITILRFNGMDLSL 217
           + T +F  GHEP  G  YF G  +  +FI +++  G+ ++L
Sbjct: 33  VQTYVFWNGHEPSPGQYYFEGRYDLVHFIKLVKQAGLYVNL 73


>09_06_0112 +
           20928910-20929200,20929757-20929869,20929970-20930036,
           20930117-20930209,20930306-20930449,20930613-20930704,
           20930986-20931091,20931187-20931271,20931373-20931491,
           20931579-20931746,20931850-20932031,20932153-20932262,
           20932351-20932460,20932708-20932815,20933007-20933108,
           20933219-20933364,20933456-20933801,20934115-20934213,
           20934603-20934656,20934700-20934786,20935305-20935418
          Length = 911

 Score = 27.1 bits (57), Expect = 8.9
 Identities = 14/40 (35%), Positives = 22/40 (55%), Gaps = 1/40 (2%)
 Frame = +2

Query: 89  LS*LNTKIF*TGHEPIIGHLYFGGHKNEY-FITILRFNGM 205
           L+ + T +F  GHEP  G  YF G  +   F+ +++ N M
Sbjct: 79  LNTIETYVFWNGHEPEPGKYYFEGRFDLIRFLNVIKDNDM 118


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 11,649,583
Number of Sequences: 37544
Number of extensions: 213992
Number of successful extensions: 391
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 384
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 391
length of database: 14,793,348
effective HSP length: 77
effective length of database: 11,902,460
effective search space used: 1118831240
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)