Bombyx BLAST Result against arabidopsis

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= epV30445
         (516 letters)

Database: arabidopsis 
           28,952 sequences; 12,070,560 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

At5g63810.1 68418.m08008 beta-galactosidase, putative / lactase,...    32   0.20 
At3g07980.1 68416.m00975 protein kinase, putative similar to MAP...    32   0.26 
At3g13750.1 68416.m01735 beta-galactosidase, putative / lactase,...    29   1.9  
At3g13530.1 68416.m01701 MAP3K epsilon protein kinase identical ...    28   4.3  
At5g56870.1 68418.m07097 beta-galactosidase, putative / lactase,...    27   5.7  
At3g05360.1 68416.m00584 disease resistance family protein / LRR...    27   5.7  
At3g52840.1 68416.m05823 beta-galactosidase, putative / lactase,...    27   9.9  
At3g49440.1 68416.m05404 F-box family protein-related contains w...    27   9.9  

>At5g63810.1 68418.m08008 beta-galactosidase, putative / lactase,
           putative similar to beta-galactosidase GI:7939621 from
           [Lycopersicon esculentum]; contains Pfam profile
           PF01301: Glycosyl hydrolases family 35
          Length = 741

 Score = 32.3 bits (70), Expect = 0.20
 Identities = 22/64 (34%), Positives = 32/64 (50%), Gaps = 1/64 (1%)
 Frame = +2

Query: 29  RSLPGQLVFL*NLKVCNENILS*LNTKIF*TGHEPIIGHLYFGGHKN-EYFITILRFNGM 205
           RS+P     L  ++   E   + + + +F  GHEP  G  YFGG  N   FI I++  GM
Sbjct: 57  RSVPAMWPSL--VQTAKEGGCNAIESYVFWNGHEPSPGKYYFGGRYNIVKFIKIVQQAGM 114

Query: 206 DLSL 217
            + L
Sbjct: 115 HMIL 118


>At3g07980.1 68416.m00975 protein kinase, putative similar to MAP3K
            epsilon protein kinase [Arabidopsis thaliana]
            gi|3549652|emb|CAA12272
          Length = 1367

 Score = 31.9 bits (69), Expect = 0.26
 Identities = 19/54 (35%), Positives = 28/54 (51%), Gaps = 1/54 (1%)
 Frame = -2

Query: 161  AHRNINVQLLVHGRFRIFLCLINSEYFHYRLLNFIKI-LADPADFVVPQSINKR 3
            A RN   QL  HG   ++L L++ EY+    L+ I + LA   D  V Q+  K+
Sbjct: 1188 ASRNSREQLRAHGGLDVYLSLLDDEYWSVIALDSIAVCLAQDVDQKVEQAFLKK 1241


>At3g13750.1 68416.m01735 beta-galactosidase, putative / lactase,
           putative similar to beta-galactosidase precursor
           SP:P48980 from [Lycopersicon esculentum]
          Length = 847

 Score = 29.1 bits (62), Expect = 1.9
 Identities = 16/52 (30%), Positives = 27/52 (51%), Gaps = 1/52 (1%)
 Frame = +2

Query: 65  LKVCNENILS*LNTKIF*TGHEPIIGHLYF-GGHKNEYFITILRFNGMDLSL 217
           ++   E  L  + T +F  GHEP  G  YF G +    F+ +++ +G+ L L
Sbjct: 69  IRKAKEGGLDVIQTYVFWNGHEPSPGKYYFEGNYDLVKFVKLVQQSGLYLHL 120


>At3g13530.1 68416.m01701 MAP3K epsilon protein kinase identical to
            MAP3K epsilon protein kinase [Arabidopsis thaliana]
            gi|3549652|emb|CAA12272
          Length = 1368

 Score = 27.9 bits (59), Expect = 4.3
 Identities = 13/37 (35%), Positives = 20/37 (54%)
 Frame = -2

Query: 161  AHRNINVQLLVHGRFRIFLCLINSEYFHYRLLNFIKI 51
            A RN   QL  HG   ++L L++ EY+    L+ I +
Sbjct: 1188 ASRNSREQLRAHGGLDVYLSLLDDEYWSVIALDSIAV 1224


>At5g56870.1 68418.m07097 beta-galactosidase, putative / lactase,
           putative similar to beta-galactosidase precursor
           GI:3869280 from [Carica papaya]
          Length = 724

 Score = 27.5 bits (58), Expect = 5.7
 Identities = 16/52 (30%), Positives = 26/52 (50%), Gaps = 1/52 (1%)
 Frame = +2

Query: 65  LKVCNENILS*LNTKIF*TGHEPIIGHLYFGGHKN-EYFITILRFNGMDLSL 217
           ++   E  L  + T +F  GHEP  G  YFG   +   FI ++   G+ ++L
Sbjct: 64  IQKAKEGGLDVIETYVFWNGHEPSPGQYYFGDRYDLVKFIKLVHQAGLYVNL 115


>At3g05360.1 68416.m00584 disease resistance family protein / LRR
           family protein contains leucine rich-repeat domains
           Pfam:PF00560, INTERPRO:IPR001611; similar to
           elicitor-inducible LRR receptor-like protein EILP
           [Nicotiana tabacum] gi|6635236|dbj|BAA88636; similar to
           Cf-2.2 [Lycopersicon pimpinellifolium]
           gi|1184077|gb|AAC15780
          Length = 786

 Score = 27.5 bits (58), Expect = 5.7
 Identities = 8/16 (50%), Positives = 14/16 (87%)
 Frame = +2

Query: 134 IIGHLYFGGHKNEYFI 181
           +IGH++F  HK+E+F+
Sbjct: 755 VIGHIFFTAHKHEWFM 770


>At3g52840.1 68416.m05823 beta-galactosidase, putative / lactase,
           putative similar to beta-galactosidase precursor
           GI:3869280 from [Carica papaya]
          Length = 727

 Score = 26.6 bits (56), Expect = 9.9
 Identities = 12/30 (40%), Positives = 16/30 (53%)
 Frame = +2

Query: 65  LKVCNENILS*LNTKIF*TGHEPIIGHLYF 154
           +K   E  L  + T +F  GHEP  G+ YF
Sbjct: 64  IKKAKEGGLDVIQTYVFWNGHEPSPGNYYF 93


>At3g49440.1 68416.m05404 F-box family protein-related contains weak
           hit to TIGRFAM TIGR01640 : F-box protein interaction
           domain
          Length = 200

 Score = 26.6 bits (56), Expect = 9.9
 Identities = 11/22 (50%), Positives = 15/22 (68%)
 Frame = +2

Query: 134 IIGHLYFGGHKNEYFITILRFN 199
           I GHLY+    NEY + I+RF+
Sbjct: 25  INGHLYYKAMGNEYQLMIVRFD 46


  Database: arabidopsis
    Posted date:  Oct 4, 2007 10:56 AM
  Number of letters in database: 12,070,560
  Number of sequences in database:  28,952
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 9,885,656
Number of Sequences: 28952
Number of extensions: 189482
Number of successful extensions: 314
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 310
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 314
length of database: 12,070,560
effective HSP length: 76
effective length of database: 9,870,208
effective search space used: 937669760
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)