Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= epV30435
         (516 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF442747-1|AAL40947.1|  669|Tribolium castaneum ABC transmembran...    23   1.2  
AF422804-1|AAL56571.1|  669|Tribolium castaneum ABC transmembran...    23   1.2  
AM292382-1|CAL23194.2|  670|Tribolium castaneum gustatory recept...    22   2.8  
AM292349-1|CAL23161.1|  248|Tribolium castaneum gustatory recept...    22   2.8  

>AF442747-1|AAL40947.1|  669|Tribolium castaneum ABC transmembrane
           transporter protein.
          Length = 669

 Score = 23.4 bits (48), Expect = 1.2
 Identities = 9/18 (50%), Positives = 14/18 (77%)
 Frame = -1

Query: 357 LNLIQTLLISLINGYYYY 304
           + L+QTL+ISL+ G  Y+
Sbjct: 417 VRLLQTLIISLVIGAIYF 434


>AF422804-1|AAL56571.1|  669|Tribolium castaneum ABC transmembrane
           transporter white protein.
          Length = 669

 Score = 23.4 bits (48), Expect = 1.2
 Identities = 9/18 (50%), Positives = 14/18 (77%)
 Frame = -1

Query: 357 LNLIQTLLISLINGYYYY 304
           + L+QTL+ISL+ G  Y+
Sbjct: 417 VRLLQTLIISLVIGAIYF 434


>AM292382-1|CAL23194.2|  670|Tribolium castaneum gustatory receptor
           candidate 61 protein.
          Length = 670

 Score = 22.2 bits (45), Expect = 2.8
 Identities = 8/20 (40%), Positives = 12/20 (60%)
 Frame = +1

Query: 382 KLVQYFNFFLPIFICLKLNI 441
           KL QY N+    ++CL + I
Sbjct: 124 KLGQYINYETDYYVCLAMTI 143


>AM292349-1|CAL23161.1|  248|Tribolium castaneum gustatory receptor
           candidate 28 protein.
          Length = 248

 Score = 22.2 bits (45), Expect = 2.8
 Identities = 12/49 (24%), Positives = 25/49 (51%)
 Frame = -1

Query: 381 ICRMNFKYLNLIQTLLISLINGYYYYIHIQCNIILISMRNLCILTNVDK 235
           +  M+F  LN   ++   +I+ ++  I  + + + +SMRN     N+ K
Sbjct: 116 VATMSFYVLNFFGSIQFIIISKHWVTIMKEWSFMEMSMRNYGSSINMKK 164


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 111,608
Number of Sequences: 336
Number of extensions: 2405
Number of successful extensions: 4
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 4
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4
length of database: 122,585
effective HSP length: 53
effective length of database: 104,777
effective search space used: 12363686
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)