Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= epV30435
         (516 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z75532-6|CAA99813.2|  330|Caenorhabditis elegans Hypothetical pr...    27   8.0  
Z75530-9|CAA99797.2|  330|Caenorhabditis elegans Hypothetical pr...    27   8.0  
AC084197-1|AAG23478.1|  328|Caenorhabditis elegans Serpentine re...    27   8.0  
AC006689-1|AAF39971.2|  257|Caenorhabditis elegans Hypothetical ...    27   8.0  

>Z75532-6|CAA99813.2|  330|Caenorhabditis elegans Hypothetical
           protein C47E8.2 protein.
          Length = 330

 Score = 27.1 bits (57), Expect = 8.0
 Identities = 10/22 (45%), Positives = 14/22 (63%)
 Frame = -1

Query: 312 YYYIHIQCNIILISMRNLCILT 247
           Y+YI+++ NI L     LC LT
Sbjct: 127 YFYIYLKANIYLFRFAMLCFLT 148


>Z75530-9|CAA99797.2|  330|Caenorhabditis elegans Hypothetical
           protein C47E8.2 protein.
          Length = 330

 Score = 27.1 bits (57), Expect = 8.0
 Identities = 10/22 (45%), Positives = 14/22 (63%)
 Frame = -1

Query: 312 YYYIHIQCNIILISMRNLCILT 247
           Y+YI+++ NI L     LC LT
Sbjct: 127 YFYIYLKANIYLFRFAMLCFLT 148


>AC084197-1|AAG23478.1|  328|Caenorhabditis elegans Serpentine
           receptor, class v protein24 protein.
          Length = 328

 Score = 27.1 bits (57), Expect = 8.0
 Identities = 17/55 (30%), Positives = 30/55 (54%), Gaps = 1/55 (1%)
 Frame = -1

Query: 408 KKIKVLNQFICRMNFKYLNLIQTLLISLINGYYYYIHIQC-NIILISMRNLCILT 247
           + I V+ QF+    F Y +    L  +  N  YY+++I+C  II +S++   I+T
Sbjct: 61  RNILVIRQFM----FNYQDYY--LAAASYNSVYYFLYIRCTGIIFLSLQRYLIIT 109


>AC006689-1|AAF39971.2|  257|Caenorhabditis elegans Hypothetical
           protein T22E7.2 protein.
          Length = 257

 Score = 27.1 bits (57), Expect = 8.0
 Identities = 12/35 (34%), Positives = 20/35 (57%)
 Frame = -2

Query: 488 CYI*SSPYTIETSLVLIFNFKQMKIGKKKLKY*TN 384
           C I     ++ T+ +L F+FK  K+G+   +Y TN
Sbjct: 137 CIIIYGVLSVTTAHLLYFHFKLFKVGQTTYRYMTN 171


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 10,059,611
Number of Sequences: 27780
Number of extensions: 185589
Number of successful extensions: 418
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 414
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 418
length of database: 12,740,198
effective HSP length: 77
effective length of database: 10,601,138
effective search space used: 996506972
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)