Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= epV30435
         (516 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ325076-1|ABD14090.1|  191|Apis mellifera complementary sex det...    23   1.9  
AY823258-1|AAX18443.1|  145|Apis mellifera pburs protein.              22   3.3  
AM420632-1|CAM06632.1|  145|Apis mellifera bursicon subunit beta...    22   3.3  

>DQ325076-1|ABD14090.1|  191|Apis mellifera complementary sex
           determiner protein.
          Length = 191

 Score = 23.0 bits (47), Expect = 1.9
 Identities = 10/24 (41%), Positives = 13/24 (54%)
 Frame = +3

Query: 288 YTVYEYNNNNH*LRKLKEFELNLN 359
           Y  Y YNNNN+     K+   N+N
Sbjct: 101 YNNYNYNNNNY--NNYKKLYYNIN 122


>AY823258-1|AAX18443.1|  145|Apis mellifera pburs protein.
          Length = 145

 Score = 22.2 bits (45), Expect = 3.3
 Identities = 10/20 (50%), Positives = 14/20 (70%)
 Frame = -1

Query: 117 KFRFFILFVMSEYLILNVFI 58
           K  F I+F+ S +LIL +FI
Sbjct: 2   KENFSIMFIHSIFLILIIFI 21


>AM420632-1|CAM06632.1|  145|Apis mellifera bursicon subunit beta
           protein precursor protein.
          Length = 145

 Score = 22.2 bits (45), Expect = 3.3
 Identities = 10/20 (50%), Positives = 14/20 (70%)
 Frame = -1

Query: 117 KFRFFILFVMSEYLILNVFI 58
           K  F I+F+ S +LIL +FI
Sbjct: 2   KENFSIMFIHSIFLILIIFI 21


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 124,874
Number of Sequences: 438
Number of extensions: 2603
Number of successful extensions: 3
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 3
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3
length of database: 146,343
effective HSP length: 54
effective length of database: 122,691
effective search space used: 14354847
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)