Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= epV30434
         (516 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ015969-1|AAY81926.1|  397|Apis mellifera stargazin related pro...    22   4.3  
AY647436-1|AAU81605.1|  567|Apis mellifera juvenile hormone este...    21   5.7  
AY569697-1|AAS86650.1|  413|Apis mellifera complementary sex det...    21   5.7  
AB083009-1|BAC54130.1|  567|Apis mellifera esterase protein.           21   5.7  

>DQ015969-1|AAY81926.1|  397|Apis mellifera stargazin related
           protein STG-1 protein.
          Length = 397

 Score = 21.8 bits (44), Expect = 4.3
 Identities = 8/20 (40%), Positives = 10/20 (50%)
 Frame = -3

Query: 118 DVRKKNYRTARHRSRVHAHY 59
           D R+KNY    H    H H+
Sbjct: 264 DSRRKNYGGVYHLDNHHVHH 283


>AY647436-1|AAU81605.1|  567|Apis mellifera juvenile hormone
           esterase protein.
          Length = 567

 Score = 21.4 bits (43), Expect = 5.7
 Identities = 12/26 (46%), Positives = 16/26 (61%), Gaps = 1/26 (3%)
 Frame = +1

Query: 133 DVIYLPICC-GDRTIPS*ALNTLFWI 207
           D +YL +    DRT PS +L  +FWI
Sbjct: 104 DCLYLNVYVPADRT-PSQSLPVIFWI 128


>AY569697-1|AAS86650.1|  413|Apis mellifera complementary sex
           determiner protein.
          Length = 413

 Score = 21.4 bits (43), Expect = 5.7
 Identities = 11/29 (37%), Positives = 15/29 (51%)
 Frame = -2

Query: 452 NLYNYV*SDSK*RLNEY*LNLFQKNKELN 366
           N YNY  ++ K   N Y   L+ KN  +N
Sbjct: 320 NNYNYNNNNYKYNYNNYNKKLYYKNYIIN 348


>AB083009-1|BAC54130.1|  567|Apis mellifera esterase protein.
          Length = 567

 Score = 21.4 bits (43), Expect = 5.7
 Identities = 12/26 (46%), Positives = 16/26 (61%), Gaps = 1/26 (3%)
 Frame = +1

Query: 133 DVIYLPICC-GDRTIPS*ALNTLFWI 207
           D +YL +    DRT PS +L  +FWI
Sbjct: 104 DCLYLNVYVPADRT-PSQSLPVIFWI 128


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 138,356
Number of Sequences: 438
Number of extensions: 2792
Number of successful extensions: 4
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 4
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4
length of database: 146,343
effective HSP length: 54
effective length of database: 122,691
effective search space used: 14354847
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)