Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= epV30430
         (516 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BT003563-1|AAO39567.1|  443|Drosophila melanogaster LP03430p pro...   283   1e-76
AY069697-1|AAL39842.1|  443|Drosophila melanogaster LD46767p pro...   283   1e-76
AE014134-1641|AAF52777.1|  443|Drosophila melanogaster CG4422-PA...   283   1e-76
L03209-1|AAA28567.1|  448|Drosophila melanogaster GDP dissociati...   264   4e-71
AY061052-1|AAL28600.1|  511|Drosophila melanogaster LD02194p pro...    69   5e-12
AF105063-1|AAD16891.1|  511|Drosophila melanogaster Rab escort p...    69   5e-12
AE013599-2914|AAF57544.1|  511|Drosophila melanogaster CG8432-PA...    69   5e-12
AE014298-2068|AAF48396.1|  621|Drosophila melanogaster CG9521-PA...    32   0.53 
AJ001514-1|CAA04797.1|  435|Drosophila melanogaster DRING protei...    29   3.7  
AE014298-2077|AAF48404.1|  633|Drosophila melanogaster CG12398-P...    29   3.7  
AE013599-3820|AAF47168.2|  891|Drosophila melanogaster CG13569-P...    29   3.7  
AY058535-1|AAL13764.1|  435|Drosophila melanogaster LD23953p pro...    29   4.9  
AE014297-4161|AAF56737.1|  435|Drosophila melanogaster CG5595-PA...    29   4.9  

>BT003563-1|AAO39567.1|  443|Drosophila melanogaster LP03430p
           protein.
          Length = 443

 Score =  283 bits (694), Expect = 1e-76
 Identities = 134/148 (90%), Positives = 139/148 (93%)
 Frame = +1

Query: 73  MDEEYDVIVLGTGLKECILSGMLSVSGKKVLHIDRNKYYGGESASITPLEELFAKFNAPA 252
           M+EEYD IVLGTGLKECILSGMLSVSGKKVLHIDRNKYYGGESASITPLEELF ++    
Sbjct: 1   MNEEYDAIVLGTGLKECILSGMLSVSGKKVLHIDRNKYYGGESASITPLEELFQRYGLEP 60

Query: 253 PDETYGRGRDWNVDLIPKFLMANGLLVKLLIHTGVTRYLEFKSIEGSYVYKGGKISKVPV 432
           P E +GRGRDWNVDLIPKFLMANG LVKLLIHTGVTRYLEFKSIEGSYVYKGGKI+KVPV
Sbjct: 61  PGERFGRGRDWNVDLIPKFLMANGQLVKLLIHTGVTRYLEFKSIEGSYVYKGGKIAKVPV 120

Query: 433 DQKEALASDLMGMFEKRRFRNFLIYVQD 516
           DQKEALASDLMGMFEKRRFRNFLIYVQD
Sbjct: 121 DQKEALASDLMGMFEKRRFRNFLIYVQD 148


>AY069697-1|AAL39842.1|  443|Drosophila melanogaster LD46767p
           protein.
          Length = 443

 Score =  283 bits (694), Expect = 1e-76
 Identities = 134/148 (90%), Positives = 139/148 (93%)
 Frame = +1

Query: 73  MDEEYDVIVLGTGLKECILSGMLSVSGKKVLHIDRNKYYGGESASITPLEELFAKFNAPA 252
           M+EEYD IVLGTGLKECILSGMLSVSGKKVLHIDRNKYYGGESASITPLEELF ++    
Sbjct: 1   MNEEYDAIVLGTGLKECILSGMLSVSGKKVLHIDRNKYYGGESASITPLEELFQRYGLEP 60

Query: 253 PDETYGRGRDWNVDLIPKFLMANGLLVKLLIHTGVTRYLEFKSIEGSYVYKGGKISKVPV 432
           P E +GRGRDWNVDLIPKFLMANG LVKLLIHTGVTRYLEFKSIEGSYVYKGGKI+KVPV
Sbjct: 61  PGERFGRGRDWNVDLIPKFLMANGQLVKLLIHTGVTRYLEFKSIEGSYVYKGGKIAKVPV 120

Query: 433 DQKEALASDLMGMFEKRRFRNFLIYVQD 516
           DQKEALASDLMGMFEKRRFRNFLIYVQD
Sbjct: 121 DQKEALASDLMGMFEKRRFRNFLIYVQD 148


>AE014134-1641|AAF52777.1|  443|Drosophila melanogaster CG4422-PA
           protein.
          Length = 443

 Score =  283 bits (694), Expect = 1e-76
 Identities = 134/148 (90%), Positives = 139/148 (93%)
 Frame = +1

Query: 73  MDEEYDVIVLGTGLKECILSGMLSVSGKKVLHIDRNKYYGGESASITPLEELFAKFNAPA 252
           M+EEYD IVLGTGLKECILSGMLSVSGKKVLHIDRNKYYGGESASITPLEELF ++    
Sbjct: 1   MNEEYDAIVLGTGLKECILSGMLSVSGKKVLHIDRNKYYGGESASITPLEELFQRYGLEP 60

Query: 253 PDETYGRGRDWNVDLIPKFLMANGLLVKLLIHTGVTRYLEFKSIEGSYVYKGGKISKVPV 432
           P E +GRGRDWNVDLIPKFLMANG LVKLLIHTGVTRYLEFKSIEGSYVYKGGKI+KVPV
Sbjct: 61  PGERFGRGRDWNVDLIPKFLMANGQLVKLLIHTGVTRYLEFKSIEGSYVYKGGKIAKVPV 120

Query: 433 DQKEALASDLMGMFEKRRFRNFLIYVQD 516
           DQKEALASDLMGMFEKRRFRNFLIYVQD
Sbjct: 121 DQKEALASDLMGMFEKRRFRNFLIYVQD 148


>L03209-1|AAA28567.1|  448|Drosophila melanogaster GDP dissociation
           inhibitor protein.
          Length = 448

 Score =  264 bits (648), Expect = 4e-71
 Identities = 129/149 (86%), Positives = 133/149 (89%), Gaps = 1/149 (0%)
 Frame = +1

Query: 73  MDEEYDVIVLGTGLKECILSG-MLSVSGKKVLHIDRNKYYGGESASITPLEELFAKFNAP 249
           MDEEYDV VLGTGLKECILSG MLSVSGKKVLHIDRNKYYGGESASITPLEELF ++   
Sbjct: 1   MDEEYDVDVLGTGLKECILSGIMLSVSGKKVLHIDRNKYYGGESASITPLEELFQRYRTG 60

Query: 250 APDETYGRGRDWNVDLIPKFLMANGLLVKLLIHTGVTRYLEFKSIEGSYVYKGGKISKVP 429
           A    +GRGRDWNVDLIPKFLMANG LVKLLIHTGVTRYLEFKSIEGSYVYKGGKI+KVP
Sbjct: 61  AARPRFGRGRDWNVDLIPKFLMANGQLVKLLIHTGVTRYLEFKSIEGSYVYKGGKIAKVP 120

Query: 430 VDQKEALASDLMGMFEKRRFRNFLIYVQD 516
           VDQK     DLMGMFEKRRFRNFLIYVQD
Sbjct: 121 VDQKRPWHPDLMGMFEKRRFRNFLIYVQD 149


>AY061052-1|AAL28600.1|  511|Drosophila melanogaster LD02194p
           protein.
          Length = 511

 Score = 68.5 bits (160), Expect = 5e-12
 Identities = 51/175 (29%), Positives = 82/175 (46%), Gaps = 27/175 (15%)
 Frame = +1

Query: 73  MDEEYDVIVLGTGLKECILSGMLSVSGKKVLHIDRNKYYGGESASIT----------PLE 222
           + E++D++V+GTG  E  ++   S  GK VLH+D N+YYG   +S +           +E
Sbjct: 5   LPEQFDLVVIGTGFTESCIAAAGSRIGKSVLHLDSNEYYGDVWSSFSMDALCARLDQEVE 64

Query: 223 ELFAKFNA-----PAPDETYGRGRDWN------------VDLIPKFLMANGLLVKLLIHT 351
              A  NA         E+    + WN            +DL P+ L A G LV+LLI +
Sbjct: 65  PHSALRNARYTWHSMEKESETDAQSWNRDSVLAKSRRFSLDLCPRILYAAGELVQLLIKS 124

Query: 352 GVTRYLEFKSIEGSYVYKGGKISKVPVDQKEALASDLMGMFEKRRFRNFLIYVQD 516
            + RY EF++++   +   G+I  VP  + +   +  + + EKR    FL    D
Sbjct: 125 NICRYAEFRAVDHVCMRHNGEIVSVPCSRSDVFNTKTLTIVEKRLLMKFLTACND 179


>AF105063-1|AAD16891.1|  511|Drosophila melanogaster Rab escort
           protein homolog protein.
          Length = 511

 Score = 68.5 bits (160), Expect = 5e-12
 Identities = 51/175 (29%), Positives = 82/175 (46%), Gaps = 27/175 (15%)
 Frame = +1

Query: 73  MDEEYDVIVLGTGLKECILSGMLSVSGKKVLHIDRNKYYGGESASIT----------PLE 222
           + E++D++V+GTG  E  ++   S  GK VLH+D N+YYG   +S +           +E
Sbjct: 5   LPEQFDLVVIGTGFTESCIAAAGSRIGKSVLHLDSNEYYGDVWSSFSMDALCARLDQEVE 64

Query: 223 ELFAKFNA-----PAPDETYGRGRDWN------------VDLIPKFLMANGLLVKLLIHT 351
              A  NA         E+    + WN            +DL P+ L A G LV+LLI +
Sbjct: 65  PHSALRNARYTWHSMEKESETDAQSWNRDSVLAKSRRFSLDLCPRILYAAGELVQLLIKS 124

Query: 352 GVTRYLEFKSIEGSYVYKGGKISKVPVDQKEALASDLMGMFEKRRFRNFLIYVQD 516
            + RY EF++++   +   G+I  VP  + +   +  + + EKR    FL    D
Sbjct: 125 NICRYAEFRAVDHVCMRHNGEIVSVPCSRSDVFNTKTLTIVEKRLLMKFLTACND 179


>AE013599-2914|AAF57544.1|  511|Drosophila melanogaster CG8432-PA
           protein.
          Length = 511

 Score = 68.5 bits (160), Expect = 5e-12
 Identities = 51/175 (29%), Positives = 82/175 (46%), Gaps = 27/175 (15%)
 Frame = +1

Query: 73  MDEEYDVIVLGTGLKECILSGMLSVSGKKVLHIDRNKYYGGESASIT----------PLE 222
           + E++D++V+GTG  E  ++   S  GK VLH+D N+YYG   +S +           +E
Sbjct: 5   LPEQFDLVVIGTGFTESCIAAAGSRIGKSVLHLDSNEYYGDVWSSFSMDALCARLDQEVE 64

Query: 223 ELFAKFNA-----PAPDETYGRGRDWN------------VDLIPKFLMANGLLVKLLIHT 351
              A  NA         E+    + WN            +DL P+ L A G LV+LLI +
Sbjct: 65  PHSALRNARYTWHSMEKESETDAQSWNRDSVLAKSRRFSLDLCPRILYAAGELVQLLIKS 124

Query: 352 GVTRYLEFKSIEGSYVYKGGKISKVPVDQKEALASDLMGMFEKRRFRNFLIYVQD 516
            + RY EF++++   +   G+I  VP  + +   +  + + EKR    FL    D
Sbjct: 125 NICRYAEFRAVDHVCMRHNGEIVSVPCSRSDVFNTKTLTIVEKRLLMKFLTACND 179


>AE014298-2068|AAF48396.1|  621|Drosophila melanogaster CG9521-PA
           protein.
          Length = 621

 Score = 31.9 bits (69), Expect = 0.53
 Identities = 13/26 (50%), Positives = 17/26 (65%)
 Frame = +1

Query: 67  IIMDEEYDVIVLGTGLKECILSGMLS 144
           +I+D EYD IV+G G   C L+  LS
Sbjct: 54  VILDSEYDFIVVGAGTAGCALAARLS 79


>AJ001514-1|CAA04797.1|  435|Drosophila melanogaster DRING protein
           protein.
          Length = 435

 Score = 29.1 bits (62), Expect = 3.7
 Identities = 13/40 (32%), Positives = 20/40 (50%)
 Frame = -2

Query: 308 NLGIKSTFQSRPRPYVSSGAGALNLANSSSNGVIDADSPP 189
           N GIK   Q+RP+ + + G G       + NG  +  +PP
Sbjct: 140 NEGIKLQSQNRPQRFRTKGGGGGGGGGGNGNGAANVPAPP 179


>AE014298-2077|AAF48404.1|  633|Drosophila melanogaster CG12398-PA
           protein.
          Length = 633

 Score = 29.1 bits (62), Expect = 3.7
 Identities = 20/64 (31%), Positives = 31/64 (48%), Gaps = 1/64 (1%)
 Frame = +1

Query: 79  EEYDVIVLGTGLKECILSGMLSVSGK-KVLHIDRNKYYGGESASITPLEELFAKFNAPAP 255
           E YD IV+G G   C+L+  LS + +  VL ++     GG+   +  L +L+  F     
Sbjct: 55  ESYDFIVIGGGSAGCVLAARLSENPEWSVLLLEA----GGDEPLLIDLPQLYPVFQRSPW 110

Query: 256 DETY 267
           D  Y
Sbjct: 111 DWKY 114


>AE013599-3820|AAF47168.2|  891|Drosophila melanogaster CG13569-PA,
           isoform A protein.
          Length = 891

 Score = 29.1 bits (62), Expect = 3.7
 Identities = 10/20 (50%), Positives = 15/20 (75%)
 Frame = +1

Query: 355 VTRYLEFKSIEGSYVYKGGK 414
           +T Y ++ ++ GSYVYK GK
Sbjct: 535 LTCYFDYDNVNGSYVYKAGK 554


>AY058535-1|AAL13764.1|  435|Drosophila melanogaster LD23953p
           protein.
          Length = 435

 Score = 28.7 bits (61), Expect = 4.9
 Identities = 13/40 (32%), Positives = 20/40 (50%)
 Frame = -2

Query: 308 NLGIKSTFQSRPRPYVSSGAGALNLANSSSNGVIDADSPP 189
           N GIK   Q+RP+ + + G G       + NG  +  +PP
Sbjct: 140 NEGIKLQSQNRPQRFRTKGGGGGGGGGGNGNGAANVAAPP 179


>AE014297-4161|AAF56737.1|  435|Drosophila melanogaster CG5595-PA
           protein.
          Length = 435

 Score = 28.7 bits (61), Expect = 4.9
 Identities = 13/40 (32%), Positives = 20/40 (50%)
 Frame = -2

Query: 308 NLGIKSTFQSRPRPYVSSGAGALNLANSSSNGVIDADSPP 189
           N GIK   Q+RP+ + + G G       + NG  +  +PP
Sbjct: 140 NEGIKLQSQNRPQRFRTKGGGGGGGGGGNGNGAANVAAPP 179


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 23,446,614
Number of Sequences: 53049
Number of extensions: 509947
Number of successful extensions: 1363
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 1334
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1362
length of database: 24,988,368
effective HSP length: 80
effective length of database: 20,744,448
effective search space used: 1887744768
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)