Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= epV30430
         (516 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z99281-33|CAJ44242.1|  459|Caenorhabditis elegans Hypothetical p...   252   1e-67
Z99281-32|CAB16511.1|  444|Caenorhabditis elegans Hypothetical p...   252   1e-67
U00002-1|AAA17051.1|  444|Caenorhabditis elegans rabGDI protein.      252   1e-67
AC091125-8|AAP46267.1|  353|Caenorhabditis elegans Hypothetical ...    57   7e-09
AC091125-7|AAK27890.1|  510|Caenorhabditis elegans Hypothetical ...    57   7e-09
AF036705-5|AAB95172.1|  544|Caenorhabditis elegans Hypothetical ...    30   0.85 
Z81553-7|CAB04496.4|  797|Caenorhabditis elegans Hypothetical pr...    27   6.0  

>Z99281-33|CAJ44242.1|  459|Caenorhabditis elegans Hypothetical
           protein Y57G11C.10b protein.
          Length = 459

 Score =  252 bits (616), Expect = 1e-67
 Identities = 119/149 (79%), Positives = 131/149 (87%), Gaps = 2/149 (1%)
 Frame = +1

Query: 73  MDEEYDVIVLGTGLKECILSGMLSVSGKKVLHIDRNKYYGGESASITPLEELFAKFNAPA 252
           MDEEYD IVLGTGLKECI+SGMLSVSGKKVLHIDRN YYGGESAS+TPLE+L+ KF+ P 
Sbjct: 1   MDEEYDAIVLGTGLKECIISGMLSVSGKKVLHIDRNNYYGGESASLTPLEQLYEKFHGPQ 60

Query: 253 --PDETYGRGRDWNVDLIPKFLMANGLLVKLLIHTGVTRYLEFKSIEGSYVYKGGKISKV 426
             P +  GRGRDWNVDLIPKFLMANG LVKLLIHTGVTRYLEFKSIE S+V KGGKI KV
Sbjct: 61  AKPQQEMGRGRDWNVDLIPKFLMANGPLVKLLIHTGVTRYLEFKSIEASFVVKGGKIYKV 120

Query: 427 PVDQKEALASDLMGMFEKRRFRNFLIYVQ 513
           P D+ EALA+ LMGMFEKRRF+ FL++VQ
Sbjct: 121 PADEMEALATSLMGMFEKRRFKKFLVWVQ 149


>Z99281-32|CAB16511.1|  444|Caenorhabditis elegans Hypothetical
           protein Y57G11C.10a protein.
          Length = 444

 Score =  252 bits (616), Expect = 1e-67
 Identities = 119/149 (79%), Positives = 131/149 (87%), Gaps = 2/149 (1%)
 Frame = +1

Query: 73  MDEEYDVIVLGTGLKECILSGMLSVSGKKVLHIDRNKYYGGESASITPLEELFAKFNAPA 252
           MDEEYD IVLGTGLKECI+SGMLSVSGKKVLHIDRN YYGGESAS+TPLE+L+ KF+ P 
Sbjct: 1   MDEEYDAIVLGTGLKECIISGMLSVSGKKVLHIDRNNYYGGESASLTPLEQLYEKFHGPQ 60

Query: 253 --PDETYGRGRDWNVDLIPKFLMANGLLVKLLIHTGVTRYLEFKSIEGSYVYKGGKISKV 426
             P +  GRGRDWNVDLIPKFLMANG LVKLLIHTGVTRYLEFKSIE S+V KGGKI KV
Sbjct: 61  AKPQQEMGRGRDWNVDLIPKFLMANGPLVKLLIHTGVTRYLEFKSIEASFVVKGGKIYKV 120

Query: 427 PVDQKEALASDLMGMFEKRRFRNFLIYVQ 513
           P D+ EALA+ LMGMFEKRRF+ FL++VQ
Sbjct: 121 PADEMEALATSLMGMFEKRRFKKFLVWVQ 149


>U00002-1|AAA17051.1|  444|Caenorhabditis elegans rabGDI protein.
          Length = 444

 Score =  252 bits (616), Expect = 1e-67
 Identities = 119/149 (79%), Positives = 131/149 (87%), Gaps = 2/149 (1%)
 Frame = +1

Query: 73  MDEEYDVIVLGTGLKECILSGMLSVSGKKVLHIDRNKYYGGESASITPLEELFAKFNAPA 252
           MDEEYD IVLGTGLKECI+SGMLSVSGKKVLHIDRN YYGGESAS+TPLE+L+ KF+ P 
Sbjct: 1   MDEEYDAIVLGTGLKECIISGMLSVSGKKVLHIDRNNYYGGESASLTPLEQLYEKFHGPQ 60

Query: 253 --PDETYGRGRDWNVDLIPKFLMANGLLVKLLIHTGVTRYLEFKSIEGSYVYKGGKISKV 426
             P +  GRGRDWNVDLIPKFLMANG LVKLLIHTGVTRYLEFKSIE S+V KGGKI KV
Sbjct: 61  AKPQQEMGRGRDWNVDLIPKFLMANGPLVKLLIHTGVTRYLEFKSIEASFVVKGGKIYKV 120

Query: 427 PVDQKEALASDLMGMFEKRRFRNFLIYVQ 513
           P D+ EALA+ LMGMFEKRRF+ FL++VQ
Sbjct: 121 PADEMEALATSLMGMFEKRRFKKFLVWVQ 149


>AC091125-8|AAP46267.1|  353|Caenorhabditis elegans Hypothetical
           protein Y67D2.1b protein.
          Length = 353

 Score = 57.2 bits (132), Expect = 7e-09
 Identities = 25/47 (53%), Positives = 34/47 (72%)
 Frame = +1

Query: 73  MDEEYDVIVLGTGLKECILSGMLSVSGKKVLHIDRNKYYGGESASIT 213
           + E  DV+VLGTGL E IL+   + +G  VLH+DRN+YYGG+ +S T
Sbjct: 5   LPESVDVVVLGTGLPEAILASACARAGLSVLHLDRNEYYGGDWSSFT 51



 Score = 44.0 bits (99), Expect = 6e-05
 Identities = 23/82 (28%), Positives = 42/82 (51%), Gaps = 5/82 (6%)
 Frame = +1

Query: 277 RDWNVDLIPKFLMANGLLVKLLIHTGVTRYLEFKSIEGSYV-----YKGGKISKVPVDQK 441
           R +++DL+PK L++ G +V+ L  + V+ Y EFK +            G  ++ VP  + 
Sbjct: 122 RRFSIDLVPKILLSKGAMVQTLCDSQVSHYAEFKLVNRQLCPTETPEAGITLNPVPCSKG 181

Query: 442 EALASDLMGMFEKRRFRNFLIY 507
           E   S+ + + EKR    F+ +
Sbjct: 182 EIFQSNALSILEKRALMKFITF 203


>AC091125-7|AAK27890.1|  510|Caenorhabditis elegans Hypothetical
           protein Y67D2.1a protein.
          Length = 510

 Score = 57.2 bits (132), Expect = 7e-09
 Identities = 25/47 (53%), Positives = 34/47 (72%)
 Frame = +1

Query: 73  MDEEYDVIVLGTGLKECILSGMLSVSGKKVLHIDRNKYYGGESASIT 213
           + E  DV+VLGTGL E IL+   + +G  VLH+DRN+YYGG+ +S T
Sbjct: 5   LPESVDVVVLGTGLPEAILASACARAGLSVLHLDRNEYYGGDWSSFT 51



 Score = 44.0 bits (99), Expect = 6e-05
 Identities = 23/82 (28%), Positives = 42/82 (51%), Gaps = 5/82 (6%)
 Frame = +1

Query: 277 RDWNVDLIPKFLMANGLLVKLLIHTGVTRYLEFKSIEGSYV-----YKGGKISKVPVDQK 441
           R +++DL+PK L++ G +V+ L  + V+ Y EFK +            G  ++ VP  + 
Sbjct: 122 RRFSIDLVPKILLSKGAMVQTLCDSQVSHYAEFKLVNRQLCPTETPEAGITLNPVPCSKG 181

Query: 442 EALASDLMGMFEKRRFRNFLIY 507
           E   S+ + + EKR    F+ +
Sbjct: 182 EIFQSNALSILEKRALMKFITF 203


>AF036705-5|AAB95172.1|  544|Caenorhabditis elegans Hypothetical
           protein F37C4.6 protein.
          Length = 544

 Score = 30.3 bits (65), Expect = 0.85
 Identities = 13/43 (30%), Positives = 23/43 (53%)
 Frame = +1

Query: 79  EEYDVIVLGTGLKECILSGMLSVSGKKVLHIDRNKYYGGESAS 207
           + YD I++G G      +  L+ +GKKV  ++R    GG + +
Sbjct: 13  QSYDAIIIGGGHNGLTAAAYLTKAGKKVCVLERRHVVGGAAVT 55


>Z81553-7|CAB04496.4|  797|Caenorhabditis elegans Hypothetical
           protein F56H6.7 protein.
          Length = 797

 Score = 27.5 bits (58), Expect = 6.0
 Identities = 16/50 (32%), Positives = 24/50 (48%)
 Frame = -1

Query: 426 YFGDFSTFVNITSFDGLKLQVPGDARVNKQFD*QSISHQKLRNQVNVPVS 277
           YFGD   + N T +  L  Q P   ++ KQ    +   QK +N V + V+
Sbjct: 456 YFGDIVDWCNETGYSNLSNQFPSATQLAKQHG-DTYVFQKDQNSVLIAVN 504


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 12,097,153
Number of Sequences: 27780
Number of extensions: 260092
Number of successful extensions: 688
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 652
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 685
length of database: 12,740,198
effective HSP length: 77
effective length of database: 10,601,138
effective search space used: 996506972
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)