Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= epV30430
         (516 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AB047034-1|BAB64310.1| 1598|Apis mellifera mblk-1 protein.             21   5.7  
AF498306-5|AAM19330.1|  456|Apis mellifera dopamine receptor typ...    21   7.5  
AF393497-1|AAL60422.1|  143|Apis mellifera odorant binding prote...    21   10.0 
AB244761-1|BAE66603.1|  504|Apis mellifera cystathionine beta-sy...    21   10.0 
AB204558-1|BAD89803.1| 1143|Apis mellifera nitric oxide synthase...    21   10.0 

>AB047034-1|BAB64310.1| 1598|Apis mellifera mblk-1 protein.
          Length = 1598

 Score = 21.4 bits (43), Expect = 5.7
 Identities = 9/15 (60%), Positives = 10/15 (66%)
 Frame = +2

Query: 209 LPR*RSCSLSSTHRH 253
           + R R  SLSSTH H
Sbjct: 633 MERERDASLSSTHSH 647


>AF498306-5|AAM19330.1|  456|Apis mellifera dopamine receptor type
           D2 protein.
          Length = 456

 Score = 21.0 bits (42), Expect = 7.5
 Identities = 11/26 (42%), Positives = 13/26 (50%)
 Frame = -3

Query: 121 ILLSLFPGQSHRILHPL**CKRSTRF 44
           IL +  PG+  R   P   CK S RF
Sbjct: 404 ILCACCPGRVRRRYQPAFRCKPSQRF 429


>AF393497-1|AAL60422.1|  143|Apis mellifera odorant binding protein
           ASP5 protein.
          Length = 143

 Score = 20.6 bits (41), Expect = 10.0
 Identities = 8/23 (34%), Positives = 14/23 (60%)
 Frame = +1

Query: 145 VSGKKVLHIDRNKYYGGESASIT 213
           V GK+++ + RN+ Y G+    T
Sbjct: 103 VIGKEIVAVCRNEEYTGDDCQKT 125


>AB244761-1|BAE66603.1|  504|Apis mellifera cystathionine
           beta-synthase protein.
          Length = 504

 Score = 20.6 bits (41), Expect = 10.0
 Identities = 7/15 (46%), Positives = 11/15 (73%)
 Frame = +1

Query: 61  YTIIMDEEYDVIVLG 105
           Y II+D+E+D   +G
Sbjct: 467 YVIILDDEHDDAFIG 481


>AB204558-1|BAD89803.1| 1143|Apis mellifera nitric oxide synthase
           protein.
          Length = 1143

 Score = 20.6 bits (41), Expect = 10.0
 Identities = 8/17 (47%), Positives = 10/17 (58%)
 Frame = +3

Query: 63  HYHNG*RIRCDCPGNRL 113
           HY N  R+R  CP + L
Sbjct: 372 HYENEMRLRNGCPADWL 388


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 144,500
Number of Sequences: 438
Number of extensions: 3183
Number of successful extensions: 5
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 5
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5
length of database: 146,343
effective HSP length: 54
effective length of database: 122,691
effective search space used: 14354847
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)