Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= epV30428
(516 letters)
Database: arabidopsis
28,952 sequences; 12,070,560 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At2g47500.1 68415.m05929 kinesin motor protein-related 48 5e-06
At5g27000.1 68418.m03221 kinesin motor protein-related non-conse... 47 7e-06
At5g41310.1 68418.m05020 kinesin motor protein-related 44 5e-05
At1g63640.2 68414.m07198 kinesin motor protein-related C-termina... 43 1e-04
At1g63640.1 68414.m07197 kinesin motor protein-related C-termina... 43 1e-04
At3g10310.1 68416.m01237 kinesin motor protein-related similar t... 43 1e-04
At1g09170.1 68414.m01024 kinesin motor protein-related similar t... 40 0.001
At3g44730.1 68416.m04814 kinesin motor protein-related similar t... 36 0.021
At5g35700.1 68418.m04269 fimbrin-like protein, putative similar ... 35 0.037
At5g48460.1 68418.m05992 fimbrin-like protein, putative strong s... 34 0.049
At4g26700.1 68417.m03848 fimbrin-like protein (FIM1) identical t... 34 0.065
At5g55400.1 68418.m06902 fimbrin-like protein, putative similar ... 33 0.086
At2g04750.1 68415.m00485 fimbrin-like protein, putative similar ... 33 0.15
At5g62240.1 68418.m07815 expressed protein various predicted pro... 31 0.35
At5g25475.2 68418.m03031 expressed protein 31 0.46
At5g25475.1 68418.m03030 expressed protein 31 0.46
At3g59100.1 68416.m06589 glycosyl transferase family 48 protein ... 31 0.46
At3g11170.1 68416.m01355 omega-3 fatty acid desaturase, chloropl... 30 1.1
At5g25470.2 68418.m03029 expressed protein 29 1.4
At5g25470.1 68418.m03028 expressed protein 29 1.4
At2g25730.1 68415.m03084 expressed protein 29 1.9
At3g07070.1 68416.m00840 protein kinase family protein contains ... 29 2.5
At2g46510.1 68415.m05796 basic helix-loop-helix (bHLH) family pr... 29 2.5
At2g31010.1 68415.m03781 protein kinase family protein contains ... 29 2.5
At2g45600.1 68415.m05670 expressed protein low similarity to PrM... 28 3.2
At2g17010.1 68415.m01961 mechanosensitive ion channel domain-con... 28 4.3
At5g51420.1 68418.m06375 long-chain-alcohol O-fatty-acyltransfer... 27 7.5
At3g48710.1 68416.m05319 expressed protein putative protein - Ar... 27 7.5
At3g04450.1 68416.m00472 myb family transcription factor contain... 27 7.5
At1g72300.1 68414.m08358 leucine-rich repeat transmembrane prote... 27 7.5
At1g51150.1 68414.m05750 DegP protease family contains similarit... 27 9.9
>At2g47500.1 68415.m05929 kinesin motor protein-related
Length = 974
Score = 47.6 bits (108), Expect = 5e-06
Identities = 33/101 (32%), Positives = 50/101 (49%), Gaps = 12/101 (11%)
Frame = +3
Query: 99 DVLGEPLPNGAYEDVLRDGVILCKLANKLAPGSVKKIQERGTN------------FQLME 242
D+ EP G LR G+ILCK+ NK+ PG+V K+ E + FQ E
Sbjct: 65 DLPAEPTEEGLRLG-LRSGIILCKVLNKVQPGAVSKVVESPCDAILVADGAPLSAFQYFE 123
Query: 243 NIQRFQAAIKKYGVPEEEIFQTADPFERRNIPQVTLCLYAL 365
N++ F AI++ G P F+ +D + N +V C+ A+
Sbjct: 124 NVRNFLVAIQEMGFP---TFEASDLEQGGNASRVVNCVLAI 161
>At5g27000.1 68418.m03221 kinesin motor protein-related
non-consensus AT donor splice site at exon 12;
non-consensus AC acceptor splice site at exon 13
Length = 987
Score = 47.2 bits (107), Expect = 7e-06
Identities = 34/113 (30%), Positives = 55/113 (48%), Gaps = 17/113 (15%)
Frame = +3
Query: 78 EVLTWISDVLG----EPLPNGAYEDV----LRDGVILCKLANKLAPGSVKKIQERGTN-- 227
E W+ D++G + P E+ LR G++LC + NK+ PGSV K+ E +
Sbjct: 49 EAAGWLRDMIGVSNGKDFPGEPSEEEFRLGLRSGIVLCNVLNKVNPGSVSKVVEAPDDVA 108
Query: 228 -------FQLMENIQRFQAAIKKYGVPEEEIFQTADPFERRNIPQVTLCLYAL 365
FQ ENI+ F AI++ G+P F+ +D + ++ C+ AL
Sbjct: 109 DGAALSAFQYFENIRNFLVAIEEMGLPS---FEASDMEKGGKSIRIVNCILAL 158
>At5g41310.1 68418.m05020 kinesin motor protein-related
Length = 961
Score = 44.4 bits (100), Expect = 5e-05
Identities = 31/85 (36%), Positives = 48/85 (56%), Gaps = 6/85 (7%)
Frame = +3
Query: 60 NKDQEQEVLTWISDVLGE-PLPNGAYEDVLR----DGVILCKLANKLAPGSVKKIQERGT 224
NK Q ++ W+++ L LP A E+ LR DG +LC L N+L+PGS++ G
Sbjct: 39 NKQGHQSLVEWLNETLPYLNLPWEASEEELRACLVDGTVLCNLLNQLSPGSMR----MGG 94
Query: 225 NFQL-MENIQRFQAAIKKYGVPEEE 296
+F+ NI+RF AA+ + +P E
Sbjct: 95 SFEPGCVNIERFLAAMDEMTLPRFE 119
>At1g63640.2 68414.m07198 kinesin motor protein-related C-terminal
region is similar to C-term region of kinesin motor
protein GB:AAB51397 (Mus musculus); contains Pfam
profile: PF00225 Kinesin motor domain
Length = 1065
Score = 43.2 bits (97), Expect = 1e-04
Identities = 29/86 (33%), Positives = 47/86 (54%), Gaps = 6/86 (6%)
Frame = +3
Query: 60 NKDQEQEVLTWISDVLGE-PLPNGAYED----VLRDGVILCKLANKLAPGSVKKIQERGT 224
+K Q ++ W+++ L LP A ED LRDG +LC L N+L+PGS++ G
Sbjct: 38 SKKGHQSLVEWLNETLPYLKLPWEASEDELRACLRDGTVLCSLLNQLSPGSMR----MGG 93
Query: 225 NFQ-LMENIQRFQAAIKKYGVPEEEI 299
+F+ I+RF A+ + +P E+
Sbjct: 94 SFEPASVKIERFLTAMDEMALPRFEV 119
>At1g63640.1 68414.m07197 kinesin motor protein-related C-terminal
region is similar to C-term region of kinesin motor
protein GB:AAB51397 (Mus musculus); contains Pfam
profile: PF00225 Kinesin motor domain
Length = 1064
Score = 43.2 bits (97), Expect = 1e-04
Identities = 29/86 (33%), Positives = 47/86 (54%), Gaps = 6/86 (6%)
Frame = +3
Query: 60 NKDQEQEVLTWISDVLGE-PLPNGAYED----VLRDGVILCKLANKLAPGSVKKIQERGT 224
+K Q ++ W+++ L LP A ED LRDG +LC L N+L+PGS++ G
Sbjct: 38 SKKGHQSLVEWLNETLPYLKLPWEASEDELRACLRDGTVLCSLLNQLSPGSMR----MGG 93
Query: 225 NFQ-LMENIQRFQAAIKKYGVPEEEI 299
+F+ I+RF A+ + +P E+
Sbjct: 94 SFEPASVKIERFLTAMDEMALPRFEV 119
>At3g10310.1 68416.m01237 kinesin motor protein-related similar to
carboxy-terminal kinesin 2 GB:P79955 [Xenopus laevis]
Length = 897
Score = 42.7 bits (96), Expect = 1e-04
Identities = 31/112 (27%), Positives = 53/112 (47%), Gaps = 16/112 (14%)
Frame = +3
Query: 78 EVLTWISDVLGE-PLPNGAYE----DVLRDGVILCKLANKLAPGSVKKIQERGT------ 224
+ + W+ V+G+ +PN E LR+G+ILC NK+ PG+V K+ E +
Sbjct: 24 QAVQWLKSVVGQLGIPNQPSEKEFISCLRNGMILCNAINKIHPGAVSKVVENYSYLNGEY 83
Query: 225 ----NFQLMENIQRFQAAIKKYGVPEEEIFQ-TADPFERRNIPQVTLCLYAL 365
+Q EN++ F A++ +P E D E ++ +V C+ L
Sbjct: 84 QLPPAYQYFENVRNFLVALETLRLPGFEASDLEKDNLESGSVTKVVDCILGL 135
>At1g09170.1 68414.m01024 kinesin motor protein-related similar to
GB:AAB61066
Length = 1010
Score = 39.5 bits (88), Expect = 0.001
Identities = 26/94 (27%), Positives = 44/94 (46%), Gaps = 20/94 (21%)
Frame = +3
Query: 78 EVLTWISDVLG----EPLPNGAYED----VLRDGVILCKLANKLAPGSVKKIQERGTN-- 227
E W+ + LG LP E+ LR G++LC + N++ PG+V K+ E +
Sbjct: 59 EAARWVRNTLGVVGGRDLPADPSEEDFRIALRSGILLCNVLNRVKPGAVPKVVEAPNDPL 118
Query: 228 ----------FQLMENIQRFQAAIKKYGVPEEEI 299
FQ EN++ F +++ G+P E+
Sbjct: 119 VNQDGAALSAFQYFENLRNFLVFVEEMGIPTFEV 152
>At3g44730.1 68416.m04814 kinesin motor protein-related similar to 4
other kinesin-like proteins of A. thaliana: F02P16.12
(PID:g2191180), katA (D11371), katB (D21137), and katC
(D21138); contains non-consensus AT-AC splice sites at
intron 10
Length = 1087
Score = 35.5 bits (78), Expect = 0.021
Identities = 19/39 (48%), Positives = 24/39 (61%), Gaps = 4/39 (10%)
Frame = +3
Query: 111 EPLPNGAYED----VLRDGVILCKLANKLAPGSVKKIQE 215
E LP ED LR+G+ILC + NK+ PGSV K+ E
Sbjct: 7 ETLPEKPSEDEFSLALRNGLILCNVLNKVNPGSVLKVVE 45
>At5g35700.1 68418.m04269 fimbrin-like protein, putative similar to
fimbrin-like protein (ATFIM1) [Arabidopsis thaliana]
GI:2905893, fimbrin [Schizosaccharomyces pombe]
GI:3057144; contains Pfam profile PF00307: Calponin
homology (CH) domain
Length = 687
Score = 34.7 bits (76), Expect = 0.037
Identities = 18/39 (46%), Positives = 25/39 (64%)
Frame = +3
Query: 111 EPLPNGAYEDVLRDGVILCKLANKLAPGSVKKIQERGTN 227
+P N A+ D+++DGV+LCKL N PG+ I ER N
Sbjct: 149 DPATN-AFFDLVKDGVLLCKLINVAVPGT---IDERAIN 183
Score = 29.9 bits (64), Expect = 1.1
Identities = 14/37 (37%), Positives = 24/37 (64%)
Frame = +3
Query: 90 WISDVLGEPLPNGAYEDVLRDGVILCKLANKLAPGSV 200
WI+ + N +ED LR+G +L ++ +K++PGSV
Sbjct: 401 WINSLGTATYVNNVFED-LRNGWVLLEVLDKVSPGSV 436
>At5g48460.1 68418.m05992 fimbrin-like protein, putative strong
similarity to fimbrin-like protein AtFim2 [Arabidopsis
thaliana] GI:2737926; contains Pfam profile PF00307:
Calponin homology (CH) domain
Length = 654
Score = 34.3 bits (75), Expect = 0.049
Identities = 20/44 (45%), Positives = 25/44 (56%)
Frame = +3
Query: 114 PLPNGAYEDVLRDGVILCKLANKLAPGSVKKIQERGTNFQLMEN 245
P N +E V +DGV+LCKL N PG+ I ER N + M N
Sbjct: 152 PSSNDLFE-VAKDGVLLCKLINVAVPGT---IDERAINTKSMLN 191
Score = 31.9 bits (69), Expect = 0.26
Identities = 17/44 (38%), Positives = 25/44 (56%)
Frame = +3
Query: 69 QEQEVLTWISDVLGEPLPNGAYEDVLRDGVILCKLANKLAPGSV 200
+E+ WI+ G N +ED LRDG IL + +K++PG V
Sbjct: 396 EEKAFRFWINSFDGSVYINNVFED-LRDGWILLQTLDKVSPGIV 438
>At4g26700.1 68417.m03848 fimbrin-like protein (FIM1) identical to
fimbrin-like protein (ATFIM1) [Arabidopsis thaliana]
GI:2905893
Length = 687
Score = 33.9 bits (74), Expect = 0.065
Identities = 19/45 (42%), Positives = 27/45 (60%)
Frame = +3
Query: 111 EPLPNGAYEDVLRDGVILCKLANKLAPGSVKKIQERGTNFQLMEN 245
+P N YE +++DGV+LCKL N PG+ I ER N + + N
Sbjct: 150 DPHSNQLYE-LVKDGVLLCKLINVAVPGT---IDERAINTKRVLN 190
>At5g55400.1 68418.m06902 fimbrin-like protein, putative similar to
fimbrin-like protein (ATFIM1) [Arabidopsis thaliana]
GI:2905893; contains Pfam profile PF00307: Calponin
homology (CH) domain
Length = 714
Score = 33.5 bits (73), Expect = 0.086
Identities = 19/45 (42%), Positives = 27/45 (60%)
Frame = +3
Query: 111 EPLPNGAYEDVLRDGVILCKLANKLAPGSVKKIQERGTNFQLMEN 245
+P N YE +++DGV+LCKL N PG+ I ER N + + N
Sbjct: 151 DPDSNDLYE-LVKDGVLLCKLINIAVPGT---IDERAINTKRVLN 191
Score = 31.1 bits (67), Expect = 0.46
Identities = 16/37 (43%), Positives = 24/37 (64%)
Frame = +3
Query: 90 WISDVLGEPLPNGAYEDVLRDGVILCKLANKLAPGSV 200
WI+ + E N +EDV R+G IL ++ +K+ PGSV
Sbjct: 402 WINSLGIESYVNNVFEDV-RNGWILLEVVDKVYPGSV 437
>At2g04750.1 68415.m00485 fimbrin-like protein, putative similar to
fimbrin-like protein (ATFIM1) [Arabidopsis thaliana]
GI:2905893; contains Pfam profile PF00307: Calponin
homology (CH) domain
Length = 652
Score = 32.7 bits (71), Expect = 0.15
Identities = 17/38 (44%), Positives = 23/38 (60%)
Frame = +3
Query: 114 PLPNGAYEDVLRDGVILCKLANKLAPGSVKKIQERGTN 227
P N + D+++DGV+LCKL N PG+ I ER N
Sbjct: 144 PTTNALF-DLVKDGVLLCKLINIAVPGT---IDERAIN 177
Score = 27.1 bits (57), Expect = 7.5
Identities = 12/37 (32%), Positives = 24/37 (64%)
Frame = +3
Query: 90 WISDVLGEPLPNGAYEDVLRDGVILCKLANKLAPGSV 200
W++ + + +EDV R+G +L ++ +K++PGSV
Sbjct: 397 WMNSLGAVTYVDNVFEDV-RNGWVLLEVLDKVSPGSV 432
>At5g62240.1 68418.m07815 expressed protein various predicted
proteins, Arabidopsis thaliana; expression supported by
MPSS
Length = 366
Score = 31.5 bits (68), Expect = 0.35
Identities = 19/55 (34%), Positives = 27/55 (49%)
Frame = +3
Query: 162 LCKLANKLAPGSVKKIQERGTNFQLMENIQRFQAAIKKYGVPEEEIFQTADPFER 326
L K +AP V K+Q + TN Q E ++ K VP+E +TA+ ER
Sbjct: 161 LAKFGENVAPVLVSKLQNQDTNRQKQEAKVAHVSSRAKLTVPKEPNLRTAERSER 215
>At5g25475.2 68418.m03031 expressed protein
Length = 282
Score = 31.1 bits (67), Expect = 0.46
Identities = 12/28 (42%), Positives = 17/28 (60%)
Frame = -1
Query: 111 LPKHQRSK*EPLVLGPCFWQALCAGEIW 28
LPK+ K + V PCFW++L G+ W
Sbjct: 2 LPKNAIEKIQANVSKPCFWKSLSPGQTW 29
>At5g25475.1 68418.m03030 expressed protein
Length = 282
Score = 31.1 bits (67), Expect = 0.46
Identities = 12/28 (42%), Positives = 17/28 (60%)
Frame = -1
Query: 111 LPKHQRSK*EPLVLGPCFWQALCAGEIW 28
LPK+ K + V PCFW++L G+ W
Sbjct: 2 LPKNAIEKIQANVSKPCFWKSLSPGQTW 29
>At3g59100.1 68416.m06589 glycosyl transferase family 48 protein
contains Pfam profile: PF02364 1,3-beta-glucan synthase
Length = 1934
Score = 31.1 bits (67), Expect = 0.46
Identities = 16/46 (34%), Positives = 23/46 (50%)
Frame = -3
Query: 196 DPGANLLANLQRITPSLSTSSYAPFGSGSPKTSEIQVRTSCSWSLF 59
D A+ N ITP + +G PKT+ ++VRT W+LF
Sbjct: 444 DLKADFFLNSDEITPQDERLNQVTYGKSKPKTNFVEVRT--FWNLF 487
>At3g11170.1 68416.m01355 omega-3 fatty acid desaturase, chloroplast
(FAD7) (FADD) identical to omega-3 fatty acid
desaturase, chloroplast precursor SP:P46310 [Arabidopsis
thaliana (Mouse-ear cress)]; identical to Pfam profile
PF00487: Fatty acid desaturase; identical to cDNA
plastid fatty acid desaturase GI:809491
Length = 446
Score = 29.9 bits (64), Expect = 1.1
Identities = 18/49 (36%), Positives = 28/49 (57%), Gaps = 2/49 (4%)
Frame = -3
Query: 202 FTDPGANLLANLQRITPSLSTSSYAPFGSGSPKTSEIQVRT--SCSWSL 62
+T P +N L+N + PSLS+SSY S SP + + R + +W+L
Sbjct: 18 YTTPRSNFLSNNNKFRPSLSSSSYKT--SSSPLSFGLNSRDGFTRNWAL 64
>At5g25470.2 68418.m03029 expressed protein
Length = 280
Score = 29.5 bits (63), Expect = 1.4
Identities = 11/28 (39%), Positives = 17/28 (60%)
Frame = -1
Query: 111 LPKHQRSK*EPLVLGPCFWQALCAGEIW 28
LP++ K + V PCFW++L G+ W
Sbjct: 2 LPRNATDKIQGNVSKPCFWKSLSPGQNW 29
>At5g25470.1 68418.m03028 expressed protein
Length = 280
Score = 29.5 bits (63), Expect = 1.4
Identities = 11/28 (39%), Positives = 17/28 (60%)
Frame = -1
Query: 111 LPKHQRSK*EPLVLGPCFWQALCAGEIW 28
LP++ K + V PCFW++L G+ W
Sbjct: 2 LPRNATDKIQGNVSKPCFWKSLSPGQNW 29
>At2g25730.1 68415.m03084 expressed protein
Length = 2464
Score = 29.1 bits (62), Expect = 1.9
Identities = 12/23 (52%), Positives = 15/23 (65%)
Frame = -3
Query: 487 RLSSALWARSCSSVKVRSFLSAI 419
R + LW+RSC S + SFLS I
Sbjct: 52 RFDNVLWSRSCPSPSLLSFLSTI 74
>At3g07070.1 68416.m00840 protein kinase family protein contains
protein kinase domain, Pfam:PF00069
Length = 414
Score = 28.7 bits (61), Expect = 2.5
Identities = 20/64 (31%), Positives = 28/64 (43%)
Frame = +3
Query: 57 RNKDQEQEVLTWISDVLGEPLPNGAYEDVLRDGVILCKLANKLAPGSVKKIQERGTNFQL 236
R KD EQ ++TW V EP D +GV K N+ + +QE T L
Sbjct: 287 RPKD-EQNLVTWAQPVFKEPSRFPELADPSLEGVFPEKALNQAVAVAAMCLQEEATVRPL 345
Query: 237 MENI 248
M ++
Sbjct: 346 MSDV 349
>At2g46510.1 68415.m05796 basic helix-loop-helix (bHLH) family
protein contains Pfam profile: PF00010 helix-loop-helix
DNA-binding domain
Length = 566
Score = 28.7 bits (61), Expect = 2.5
Identities = 14/34 (41%), Positives = 19/34 (55%)
Frame = +2
Query: 140 CAKGRCDPLQIGQQISSWISEKNPRERNQLPAHG 241
C + R L G I S + EK PR+R + PA+G
Sbjct: 356 CTEKRPVSLLAGAGIVSVVDEKRPRKRGRKPANG 389
>At2g31010.1 68415.m03781 protein kinase family protein contains
protein kinase domain, Pfam:PF00069
Length = 775
Score = 28.7 bits (61), Expect = 2.5
Identities = 16/51 (31%), Positives = 28/51 (54%), Gaps = 1/51 (1%)
Frame = +3
Query: 90 WISDVLGEPLPNGAYEDVLRDGVILCKLANKL-APGSVKKIQERGTNFQLM 239
W + +L EP+PNG Y V+ D + +L N+L P + + E G +++
Sbjct: 57 WDTGILSEPIPNGFY-SVVPDKRVK-ELYNRLPTPSELHALGEEGVRIEVI 105
>At2g45600.1 68415.m05670 expressed protein low similarity to PrMC3
[Pinus radiata] GI:5487873
Length = 329
Score = 28.3 bits (60), Expect = 3.2
Identities = 17/53 (32%), Positives = 26/53 (49%), Gaps = 3/53 (5%)
Frame = +3
Query: 21 LETRFRL---HTMPARNKDQEQEVLTWISDVLGEPLPNGAYEDVLRDGVILCK 170
L +RL H +PA +D + +L W+ D P+ G + L+DGV K
Sbjct: 103 LSVEYRLAPEHRLPAAYEDAVEAIL-WLRDQARGPINGGDCDTWLKDGVDFSK 154
>At2g17010.1 68415.m01961 mechanosensitive ion channel
domain-containing protein / MS ion channel
domain-containing protein contains Pfam profile PF00924:
Mechanosensitive ion channel
Length = 779
Score = 27.9 bits (59), Expect = 4.3
Identities = 21/81 (25%), Positives = 38/81 (46%), Gaps = 3/81 (3%)
Frame = +3
Query: 24 ETRFRLH--TMPARNKDQEQEVLTWIS-DVLGEPLPNGAYEDVLRDGVILCKLANKLAPG 194
ETR R++ + A N + +++ +S L E + YED + K A A
Sbjct: 406 ETRSRMNHKNISAWNMKRLMKIVRNVSLTTLDEQMLESTYEDESTRQIRSEKEAKAAARK 465
Query: 195 SVKKIQERGTNFQLMENIQRF 257
K +++RG + +E++ RF
Sbjct: 466 IFKNVEQRGAKYIYLEDLMRF 486
>At5g51420.1 68418.m06375 long-chain-alcohol O-fatty-acyltransferase
family protein / wax synthase family protein contains
similarity to wax synthase wax synthase - Simmondsia
chinensis, PID:g5020219 similar to wax synthase
[gi:5020219] from Simmondsia chinensis
Length = 435
Score = 27.1 bits (57), Expect = 7.5
Identities = 15/35 (42%), Positives = 22/35 (62%)
Frame = -2
Query: 305 LEYFFFWYSVFLDCRLEPLNVLHELEVGSSLLDFF 201
L+ F ++S+ LDC LEP L+E + SL DF+
Sbjct: 170 LKLFNAFFSIALDCELEP--QLNEPYLAYSLRDFW 202
>At3g48710.1 68416.m05319 expressed protein putative protein -
Arabidopsis thaliana, EMBL:AL078465.1
Length = 462
Score = 27.1 bits (57), Expect = 7.5
Identities = 11/32 (34%), Positives = 20/32 (62%)
Frame = +1
Query: 202 KKSKREEPTSSSWRTFKGSKRQSRNTEYQKKK 297
K++K+E+P + ++ KGS + SR + Q K
Sbjct: 307 KRTKKEKPAAEEEKSIKGSAKSSRKSFRQVDK 338
>At3g04450.1 68416.m00472 myb family transcription factor contains
Pfam profile: PF00249 myb-like DNA-binding domain
Length = 438
Score = 27.1 bits (57), Expect = 7.5
Identities = 9/20 (45%), Positives = 15/20 (75%)
Frame = +3
Query: 42 HTMPARNKDQEQEVLTWISD 101
H++ N+ QEQ+++TW SD
Sbjct: 113 HSLQLINQPQEQKIMTWSSD 132
>At1g72300.1 68414.m08358 leucine-rich repeat transmembrane protein
kinase, putative similar to GI:3641252 from [Malus x
domestica] (Plant Mol. Biol. 40 (6), 945-957 (1999))
Length = 1095
Score = 27.1 bits (57), Expect = 7.5
Identities = 15/62 (24%), Positives = 26/62 (41%)
Frame = +3
Query: 330 NIPQVTLCLYALGRITQKHPEFTGPQLGPKMADKNERTFTEEQLRAHNAELNLQMGFNKG 509
N+P L L L R+ H +GP ++ ++ + + EL LQ F G
Sbjct: 107 NLPSSVLDLQRLSRLDLSHNRLSGPLPPGFLSALDQLLVLDLSYNSFKGELPLQQSFGNG 166
Query: 510 AS 515
++
Sbjct: 167 SN 168
>At1g51150.1 68414.m05750 DegP protease family contains similarity
to DegP2 protease GI:13172275 from [Arabidopsis
thaliana]
Length = 219
Score = 26.6 bits (56), Expect = 9.9
Identities = 12/39 (30%), Positives = 20/39 (51%)
Frame = +3
Query: 252 RFQAAIKKYGVPEEEIFQTADPFERRNIPQVTLCLYALG 368
R+ + G+ EE ++ +P E IP + +YALG
Sbjct: 126 RYGCDLAILGIDSEEFWEDINPLELGGIPFIGETVYALG 164
Database: arabidopsis
Posted date: Oct 4, 2007 10:56 AM
Number of letters in database: 12,070,560
Number of sequences in database: 28,952
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 12,714,384
Number of Sequences: 28952
Number of extensions: 282432
Number of successful extensions: 891
Number of sequences better than 10.0: 31
Number of HSP's better than 10.0 without gapping: 855
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 888
length of database: 12,070,560
effective HSP length: 76
effective length of database: 9,870,208
effective search space used: 937669760
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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