Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= epV30427
         (516 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF002238-1|AAB97731.1|  327|Anopheles gambiae ribosomal protein ...    27   0.50 
AB090816-2|BAC57908.1| 1201|Anopheles gambiae reverse transcript...    24   3.5  
AJ301655-1|CAC35008.1| 1433|Anopheles gambiae putative epidermal...    23   4.6  
DQ370045-1|ABD18606.1|  285|Anopheles gambiae putative TIL domai...    23   6.1  

>AF002238-1|AAB97731.1|  327|Anopheles gambiae ribosomal protein L5
           protein.
          Length = 327

 Score = 26.6 bits (56), Expect = 0.50
 Identities = 13/32 (40%), Positives = 18/32 (56%)
 Frame = +2

Query: 77  PASWTITNASPTTWPRTRNVSRAEGRSPRSTR 172
           PA     +  PT+WPR+R  S+ + R PR  R
Sbjct: 275 PARRRSRSTRPTSWPRSRPTSKPK-RLPRRRR 305



 Score = 23.0 bits (47), Expect = 6.1
 Identities = 11/23 (47%), Positives = 14/23 (60%)
 Frame = +2

Query: 56  RRVRSTGPASWTITNASPTTWPR 124
           RR RST P SW    + PT+ P+
Sbjct: 278 RRSRSTRPTSW--PRSRPTSKPK 298


>AB090816-2|BAC57908.1| 1201|Anopheles gambiae reverse transcriptase
           protein.
          Length = 1201

 Score = 23.8 bits (49), Expect = 3.5
 Identities = 9/24 (37%), Positives = 13/24 (54%)
 Frame = +2

Query: 77  PASWTITNASPTTWPRTRNVSRAE 148
           P SW +++ +PTT P    V   E
Sbjct: 469 PVSWPVSSDAPTTVPSDSRVEPQE 492


>AJ301655-1|CAC35008.1| 1433|Anopheles gambiae putative epidermal
           growth factor receptorprotein.
          Length = 1433

 Score = 23.4 bits (48), Expect = 4.6
 Identities = 8/21 (38%), Positives = 12/21 (57%)
 Frame = +1

Query: 97  KCISDHLAANSKCIPGRGQIP 159
           KC    +  NS+C+P +G  P
Sbjct: 279 KCPKGKMPQNSECVPCKGVCP 299


>DQ370045-1|ABD18606.1|  285|Anopheles gambiae putative TIL domain
           protein protein.
          Length = 285

 Score = 23.0 bits (47), Expect = 6.1
 Identities = 10/31 (32%), Positives = 16/31 (51%), Gaps = 1/31 (3%)
 Frame = +1

Query: 55  PPSPIYRPCFLDDYK-CISDHLAANSKCIPG 144
           P + +Y  C     K CIS+ +   + C+PG
Sbjct: 27  PKNEVYSCCAPCPQKACISEAVKCQTSCLPG 57


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 540,581
Number of Sequences: 2352
Number of extensions: 11462
Number of successful extensions: 56
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 55
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 56
length of database: 563,979
effective HSP length: 60
effective length of database: 422,859
effective search space used: 46937349
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)