Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= epV30427
         (516 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BC010900-1|AAH10900.1|  159|Homo sapiens UBE2W protein protein.        31   1.8  
AK001873-1|BAA91954.1|  151|Homo sapiens protein ( Homo sapiens ...    30   4.2  
L14837-1|AAA02891.1| 1736|Homo sapiens tight junction (zonula oc...    30   5.5  
DQ015919-1|AAY22179.1| 1748|Homo sapiens tight junction protein ...    30   5.5  
BC111712-1|AAI11713.1| 1748|Homo sapiens tight junction protein ...    30   5.5  
AK123755-1|BAC85688.1|  258|Homo sapiens rCS1a) mRNA.  protein.        29   7.3  
CR457275-1|CAG33556.1|  151|Homo sapiens FLJ11011 protein.             29   9.7  
BC016326-1|AAH16326.1|  151|Homo sapiens ubiquitin-conjugating e...    29   9.7  
AY948289-1|AAY24555.1|  162|Homo sapiens ubiquitin-conjugating e...    29   9.7  
AK024050-1|BAB14800.1|  162|Homo sapiens protein ( Homo sapiens ...    29   9.7  
AK021735-1|BAB13883.1|  151|Homo sapiens protein ( Homo sapiens ...    29   9.7  

>BC010900-1|AAH10900.1|  159|Homo sapiens UBE2W protein protein.
          Length = 159

 Score = 31.5 bits (68), Expect = 1.8
 Identities = 17/63 (26%), Positives = 31/63 (49%)
 Frame = +3

Query: 297 SFNRRLSVAEL*IQSDLGSAHVVQGRRRLKLLHQWILSFDQANDSV**GQQFRLVFGFHV 476
           S  +RL    L +Q+D      +  +     + QWI+  + A  ++  G++F+L+F F  
Sbjct: 3   SMQKRLQKELLALQNDPSPGMTLNEKSAQNSITQWIVDMESAPGTLYEGEKFQLLFKFSS 62

Query: 477 RRP 485
           R P
Sbjct: 63  RYP 65


>AK001873-1|BAA91954.1|  151|Homo sapiens protein ( Homo sapiens
           cDNA FLJ11011 fis, clone PLACE1003174, moderately
           similar to UBIQUITIN-CONJUGATING ENZYME E2-18 KD (EC
           6.3.2.19). ).
          Length = 151

 Score = 30.3 bits (65), Expect = 4.2
 Identities = 17/63 (26%), Positives = 32/63 (50%)
 Frame = +3

Query: 297 SFNRRLSVAEL*IQSDLGSAHVVQGRRRLKLLHQWILSFDQANDSV**GQQFRLVFGFHV 476
           S  +RL    L +Q+D      +  +     + QWI+  + A+ ++  G++F+L+F F  
Sbjct: 3   SMQKRLQKELLALQNDPPPGMTLNEKSVQNSITQWIVDMEGASGTLYEGEKFQLLFKFSS 62

Query: 477 RRP 485
           R P
Sbjct: 63  RYP 65


>L14837-1|AAA02891.1| 1736|Homo sapiens tight junction (zonula
           occludens) protein ZO-1 protein.
          Length = 1736

 Score = 29.9 bits (64), Expect = 5.5
 Identities = 14/35 (40%), Positives = 17/35 (48%)
 Frame = +2

Query: 83  SWTITNASPTTWPRTRNVSRAEGRSPRSTRYRCSS 187
           S  +   S   WPR R+ SR    SPRS R   +S
Sbjct: 132 SGVVNRRSEKIWPRDRSASRERSLSPRSDRRSVAS 166


>DQ015919-1|AAY22179.1| 1748|Homo sapiens tight junction protein 1
           (zona occludens 1) protein.
          Length = 1748

 Score = 29.9 bits (64), Expect = 5.5
 Identities = 14/35 (40%), Positives = 17/35 (48%)
 Frame = +2

Query: 83  SWTITNASPTTWPRTRNVSRAEGRSPRSTRYRCSS 187
           S  +   S   WPR R+ SR    SPRS R   +S
Sbjct: 144 SGVVNRRSEKIWPRDRSASRERSLSPRSDRRSVAS 178


>BC111712-1|AAI11713.1| 1748|Homo sapiens tight junction protein 1
           (zona occludens 1) protein.
          Length = 1748

 Score = 29.9 bits (64), Expect = 5.5
 Identities = 14/35 (40%), Positives = 17/35 (48%)
 Frame = +2

Query: 83  SWTITNASPTTWPRTRNVSRAEGRSPRSTRYRCSS 187
           S  +   S   WPR R+ SR    SPRS R   +S
Sbjct: 144 SGVVNRRSEKIWPRDRSASRERSLSPRSDRRSVAS 178


>AK123755-1|BAC85688.1|  258|Homo sapiens rCS1a) mRNA.  protein.
          Length = 258

 Score = 29.5 bits (63), Expect = 7.3
 Identities = 17/41 (41%), Positives = 19/41 (46%)
 Frame = +2

Query: 53  GRRVRSTGPASWTITNASPTTWPRTRNVSRAEGRSPRSTRY 175
           GR  R T PA  T    SP T  R  + SR   R P + RY
Sbjct: 107 GRASRPTSPAESTAPPRSPRTSSRVGSGSRVGTRGPLAHRY 147


>CR457275-1|CAG33556.1|  151|Homo sapiens FLJ11011 protein.
          Length = 151

 Score = 29.1 bits (62), Expect = 9.7
 Identities = 17/63 (26%), Positives = 31/63 (49%)
 Frame = +3

Query: 297 SFNRRLSVAEL*IQSDLGSAHVVQGRRRLKLLHQWILSFDQANDSV**GQQFRLVFGFHV 476
           S  +RL    L +Q+D      +  +     + QWI+  + A  ++  G++F+L+F F  
Sbjct: 3   SMQKRLQKELLALQNDPPPGMTLNEKSVQNSITQWIVDMEGAPGTLYEGEKFQLLFKFSS 62

Query: 477 RRP 485
           R P
Sbjct: 63  RYP 65


>BC016326-1|AAH16326.1|  151|Homo sapiens ubiquitin-conjugating
           enzyme E2W (putative) protein.
          Length = 151

 Score = 29.1 bits (62), Expect = 9.7
 Identities = 17/63 (26%), Positives = 31/63 (49%)
 Frame = +3

Query: 297 SFNRRLSVAEL*IQSDLGSAHVVQGRRRLKLLHQWILSFDQANDSV**GQQFRLVFGFHV 476
           S  +RL    L +Q+D      +  +     + QWI+  + A  ++  G++F+L+F F  
Sbjct: 3   SMQKRLQKELLALQNDPPPGMTLNEKSVQNSITQWIVDMEGAPGTLYEGEKFQLLFKFSS 62

Query: 477 RRP 485
           R P
Sbjct: 63  RYP 65


>AY948289-1|AAY24555.1|  162|Homo sapiens ubiquitin-conjugating
           enzyme 16 protein.
          Length = 162

 Score = 29.1 bits (62), Expect = 9.7
 Identities = 17/62 (27%), Positives = 31/62 (50%)
 Frame = +3

Query: 300 FNRRLSVAEL*IQSDLGSAHVVQGRRRLKLLHQWILSFDQANDSV**GQQFRLVFGFHVR 479
           F +RL    L +Q+D      +  +     + QWI+  + A  ++  G++F+L+F F  R
Sbjct: 15  FPKRLQKELLALQNDPPPGMTLNEKSVQNSITQWIVDMEGAPGTLYEGEKFQLLFKFSSR 74

Query: 480 RP 485
            P
Sbjct: 75  YP 76


>AK024050-1|BAB14800.1|  162|Homo sapiens protein ( Homo sapiens
           cDNA FLJ13988 fis, clone Y79AA1002027, moderately
           similar to UBIQUITIN-CONJUGATING ENZYME E2-18 KD (EC
           6.3.2.19). ).
          Length = 162

 Score = 29.1 bits (62), Expect = 9.7
 Identities = 17/62 (27%), Positives = 31/62 (50%)
 Frame = +3

Query: 300 FNRRLSVAEL*IQSDLGSAHVVQGRRRLKLLHQWILSFDQANDSV**GQQFRLVFGFHVR 479
           F +RL    L +Q+D      +  +     + QWI+  + A  ++  G++F+L+F F  R
Sbjct: 15  FPKRLQKELLALQNDPPPGMTLNEKSVQNSITQWIVDMEGAPGTLYEGEKFQLLFKFSSR 74

Query: 480 RP 485
            P
Sbjct: 75  YP 76


>AK021735-1|BAB13883.1|  151|Homo sapiens protein ( Homo sapiens
           cDNA FLJ11673 fis, clone HEMBA1004734, moderately
           similar to UBIQUITIN-CONJUGATING ENZYME E2-18 KD (EC
           6.3.2.19). ).
          Length = 151

 Score = 29.1 bits (62), Expect = 9.7
 Identities = 17/63 (26%), Positives = 31/63 (49%)
 Frame = +3

Query: 297 SFNRRLSVAEL*IQSDLGSAHVVQGRRRLKLLHQWILSFDQANDSV**GQQFRLVFGFHV 476
           S  +RL    L +Q+D      +  +     + QWI+  + A  ++  G++F+L+F F  
Sbjct: 3   SMQKRLQKELLALQNDPPPGMTLSEKSVQNSITQWIVDMEGAPGTLYEGEKFQLLFKFSS 62

Query: 477 RRP 485
           R P
Sbjct: 63  RYP 65


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 77,030,544
Number of Sequences: 237096
Number of extensions: 1603463
Number of successful extensions: 3795
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 3637
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3795
length of database: 76,859,062
effective HSP length: 85
effective length of database: 56,705,902
effective search space used: 4876707572
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)