Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= epV30426
         (516 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

12_01_0259 - 1905291-1905393,1905536-1905672,1905787-1905893,190...    28   5.1  
11_01_0261 - 1989988-1990090,1990232-1990368,1990483-1990589,199...    28   5.1  
09_02_0625 + 11334418-11334499,11335067-11335164,11335758-113358...    27   6.8  
07_03_1238 - 25075318-25075726,25075964-25076130                       27   8.9  

>12_01_0259 -
           1905291-1905393,1905536-1905672,1905787-1905893,
           1906012-1906090,1906256-1906342,1906987-1907265,
           1907401-1908114
          Length = 501

 Score = 27.9 bits (59), Expect = 5.1
 Identities = 10/18 (55%), Positives = 15/18 (83%)
 Frame = +3

Query: 117 RYTINNKIQNSVHCNLYT 170
           R+ INNK+QN+V  N++T
Sbjct: 420 RWQINNKLQNAVGANIFT 437


>11_01_0261 -
           1989988-1990090,1990232-1990368,1990483-1990589,
           1990708-1990786,1990952-1991038,1991688-1991966,
           1992109-1992822
          Length = 501

 Score = 27.9 bits (59), Expect = 5.1
 Identities = 10/18 (55%), Positives = 15/18 (83%)
 Frame = +3

Query: 117 RYTINNKIQNSVHCNLYT 170
           R+ INNK+QN+V  N++T
Sbjct: 420 RWQINNKLQNAVGANIFT 437


>09_02_0625 +
           11334418-11334499,11335067-11335164,11335758-11335831,
           11335996-11336598,11336692-11337185,11338035-11338170,
           11338417-11338488,11338581-11338652,11339078-11339226,
           11340129-11340364,11340567-11340693,11341011-11341079,
           11341172-11341361,11341465-11341857,11342084-11342195
          Length = 968

 Score = 27.5 bits (58), Expect = 6.8
 Identities = 14/30 (46%), Positives = 19/30 (63%)
 Frame = -3

Query: 379 NMTKFNLCKLESFIE*NLDCENPSGFIYLD 290
           N T F++   E FI  ++DC  PSGF Y+D
Sbjct: 89  NGTYFHISVDEDFI--SIDCGLPSGFSYVD 116


>07_03_1238 - 25075318-25075726,25075964-25076130
          Length = 191

 Score = 27.1 bits (57), Expect = 8.9
 Identities = 10/18 (55%), Positives = 16/18 (88%)
 Frame = +3

Query: 186 MYL*QITILCIVIFLMTL 239
           M+L Q +ILCI++FL+T+
Sbjct: 168 MFLVQFSILCILLFLLTM 185


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 10,247,384
Number of Sequences: 37544
Number of extensions: 162202
Number of successful extensions: 197
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 192
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 197
length of database: 14,793,348
effective HSP length: 77
effective length of database: 11,902,460
effective search space used: 1118831240
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)