Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= epV30423
         (516 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 pro...    25   0.53 
AM712901-1|CAN84640.1|  205|Tribolium castaneum hypothetical pro...    23   1.2  
AM292368-1|CAL23180.2|  387|Tribolium castaneum gustatory recept...    22   2.8  
AM292347-1|CAL23159.2|  387|Tribolium castaneum gustatory recept...    22   2.8  
AM292327-1|CAL23139.2|  387|Tribolium castaneum gustatory recept...    22   2.8  
AY618898-1|AAU87291.1|  803|Tribolium castaneum receptor tyrosin...    21   4.9  

>DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 protein.
          Length = 2700

 Score = 24.6 bits (51), Expect = 0.53
 Identities = 11/26 (42%), Positives = 14/26 (53%)
 Frame = +3

Query: 411  TKPSTASRTN*QKWRTSKTCSTGSRP 488
            TKPS    +    W+T  T ST +RP
Sbjct: 1170 TKPSYRPPSTTNHWQTKTTTSTTTRP 1195



 Score = 20.6 bits (41), Expect = 8.6
 Identities = 8/14 (57%), Positives = 11/14 (78%)
 Frame = +2

Query: 395 LNDRLYETVNSVKD 436
           L++ LYE V S+KD
Sbjct: 692 LDNNLYERVTSLKD 705


>AM712901-1|CAN84640.1|  205|Tribolium castaneum hypothetical
           protein protein.
          Length = 205

 Score = 23.4 bits (48), Expect = 1.2
 Identities = 7/27 (25%), Positives = 15/27 (55%)
 Frame = -1

Query: 222 TAPVMNMIYIAACSTIGSMFRYSLNLC 142
           T+P+ N++Y+  C    ++F   +  C
Sbjct: 151 TSPIFNLVYVYCCDNNFNVFLRQVFTC 177


>AM292368-1|CAL23180.2|  387|Tribolium castaneum gustatory receptor
           candidate 47 protein.
          Length = 387

 Score = 22.2 bits (45), Expect = 2.8
 Identities = 11/27 (40%), Positives = 17/27 (62%)
 Frame = +2

Query: 221 VLVITTIYILSFKVMFKNFEKNKDAWL 301
           VLV T     S KV+FK+ ++N  A++
Sbjct: 197 VLVPTASNSKSTKVLFKDVDRNCSAYI 223


>AM292347-1|CAL23159.2|  387|Tribolium castaneum gustatory receptor
           candidate 26 protein.
          Length = 387

 Score = 22.2 bits (45), Expect = 2.8
 Identities = 11/27 (40%), Positives = 17/27 (62%)
 Frame = +2

Query: 221 VLVITTIYILSFKVMFKNFEKNKDAWL 301
           VLV T     S KV+FK+ ++N  A++
Sbjct: 197 VLVPTASNSKSTKVLFKDVDRNCSAYI 223


>AM292327-1|CAL23139.2|  387|Tribolium castaneum gustatory receptor
           candidate 6 protein.
          Length = 387

 Score = 22.2 bits (45), Expect = 2.8
 Identities = 11/27 (40%), Positives = 17/27 (62%)
 Frame = +2

Query: 221 VLVITTIYILSFKVMFKNFEKNKDAWL 301
           VLV T     S KV+FK+ ++N  A++
Sbjct: 197 VLVPTASNSKSTKVLFKDVDRNCSAYI 223


>AY618898-1|AAU87291.1|  803|Tribolium castaneum receptor tyrosine
           kinase Torso-likeprotein protein.
          Length = 803

 Score = 21.4 bits (43), Expect = 4.9
 Identities = 8/21 (38%), Positives = 13/21 (61%)
 Frame = -1

Query: 177 IGSMFRYSLNLCSSEGGSEYI 115
           +GS++  S   CSS G S+ +
Sbjct: 339 LGSLYHISFMACSSAGCSQKV 359


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 102,794
Number of Sequences: 336
Number of extensions: 1927
Number of successful extensions: 7
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 6
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 7
length of database: 122,585
effective HSP length: 53
effective length of database: 104,777
effective search space used: 12363686
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)