Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= epV30423
         (516 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

01_06_1021 - 33883594-33884583                                         31   0.55 
11_04_0336 - 16507661-16507753,16508061-16508158,16508311-165086...    30   0.96 
06_02_0019 - 10656005-10657511,10657712-10658739                       27   6.8  
05_07_0354 - 29507068-29507170,29507406-29507431,29508264-295083...    27   6.8  
03_06_0655 - 35310640-35311126,35311217-35311320,35311461-353115...    27   6.8  
08_01_0996 + 10089800-10090149,10090426-10090483,10092922-100931...    27   8.9  

>01_06_1021 - 33883594-33884583
          Length = 329

 Score = 31.1 bits (67), Expect = 0.55
 Identities = 20/70 (28%), Positives = 37/70 (52%), Gaps = 1/70 (1%)
 Frame = -1

Query: 228 TRTAPVMNMIYIAACSTIGSMFRYSLNLCSSEGGSEYILISNQSIGRYILENLSVFV-ML 52
           TRTA V+ + Y AAC     +FR ++     E GS  + +  + +   +L ++ V V +L
Sbjct: 220 TRTAGVLVVSYFAACGVTAVLFRAAVVKGRGEEGSLGLSLPGRVLAGAVLVSVLVCVNLL 279

Query: 51  DMLPSAMFIW 22
            +L  ++F +
Sbjct: 280 GLLVQSVFYY 289


>11_04_0336 -
           16507661-16507753,16508061-16508158,16508311-16508626,
           16508699-16508891,16508990-16509030
          Length = 246

 Score = 30.3 bits (65), Expect = 0.96
 Identities = 14/40 (35%), Positives = 23/40 (57%), Gaps = 2/40 (5%)
 Frame = +2

Query: 257 KVMFKNFEKNKDAWL--EKAKLNDGVYAPCEIPLSESDSD 370
           KV+ +NF+KN    L  EK +  + +Y  C++P  + D D
Sbjct: 93  KVLEQNFKKNVPQMLFEEKKRATNKLYKKCKVPAEDVDED 132


>06_02_0019 - 10656005-10657511,10657712-10658739
          Length = 844

 Score = 27.5 bits (58), Expect = 6.8
 Identities = 14/41 (34%), Positives = 25/41 (60%)
 Frame = +2

Query: 191 AMYIMFITGAVLVITTIYILSFKVMFKNFEKNKDAWLEKAK 313
           ++Y+M I GAVLV   I+++ F +  +  +  +D  LEK +
Sbjct: 461 SIYVMAIAGAVLVYVVIHVVFFTLDQRGHD--EDVLLEKRR 499


>05_07_0354 -
           29507068-29507170,29507406-29507431,29508264-29508301,
           29508722-29508825,29509005-29509024,29509251-29509299,
           29510319-29510406,29510463-29510562,29510660-29510737,
           29512688-29512804,29513718-29513821,29514497-29514569,
           29514904-29514981,29515091-29515215,29515278-29515341,
           29515439-29515597,29515950-29516048,29516496-29516624,
           29517010-29517075,29517160-29517304,29517379-29517500,
           29517683-29517838,29517918-29518029,29518891-29519036,
           29519148-29519252,29519391-29519540,29519703-29519776,
           29519902-29520055,29520142-29520408
          Length = 1016

 Score = 27.5 bits (58), Expect = 6.8
 Identities = 14/36 (38%), Positives = 19/36 (52%)
 Frame = +2

Query: 356 ESDSDEMIKLNIKLNDRLYETVNSVKDKLTEMAHVK 463
           ES   + +    KLND+ YE V  +KD L E   +K
Sbjct: 666 ESSKRKFVDQAAKLNDQRYELVLKLKDLLIEAVALK 701


>03_06_0655 -
           35310640-35311126,35311217-35311320,35311461-35311523,
           35311568-35311686,35311777-35311826,35311939-35312081
          Length = 321

 Score = 27.5 bits (58), Expect = 6.8
 Identities = 12/18 (66%), Positives = 14/18 (77%)
 Frame = -1

Query: 102 QSIGRYILENLSVFVMLD 49
           +SIGRY L NL  F+MLD
Sbjct: 44  RSIGRYELRNLDPFLMLD 61


>08_01_0996 +
           10089800-10090149,10090426-10090483,10092922-10093126,
           10093201-10093280,10093377-10093477,10093566-10093691,
           10094099-10094101,10094736-10094763,10094875-10094961,
           10095187-10095273,10095346-10095411,10095511-10095603,
           10095688-10095744,10095834-10095959,10096049-10096139,
           10096233-10096321,10096951-10097141,10097224-10097322,
           10098814-10098829
          Length = 650

 Score = 27.1 bits (57), Expect = 8.9
 Identities = 12/31 (38%), Positives = 18/31 (58%)
 Frame = -1

Query: 156 SLNLCSSEGGSEYILISNQSIGRYILENLSV 64
           +L LCSS   S   L  N+ IGRY+  ++ +
Sbjct: 160 ALVLCSSASSSMSTLCCNREIGRYVSPSVEI 190


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 12,140,525
Number of Sequences: 37544
Number of extensions: 212464
Number of successful extensions: 590
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 582
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 590
length of database: 14,793,348
effective HSP length: 77
effective length of database: 11,902,460
effective search space used: 1118831240
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)