Bombyx BLAST Result against nematostella

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= epV30423
         (516 letters)

Database: nematostella 
           59,808 sequences; 16,821,457 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

SB_18605| Best HMM Match : No HMM Matches (HMM E-Value=.)              31   0.74 
SB_47539| Best HMM Match : No HMM Matches (HMM E-Value=.)              27   6.9  
SB_45885| Best HMM Match : efhand (HMM E-Value=5.9e-05)                27   6.9  
SB_59366| Best HMM Match : 7tm_1 (HMM E-Value=5.2e-23)                 27   9.2  
SB_33958| Best HMM Match : MAM (HMM E-Value=1.1e-32)                   27   9.2  

>SB_18605| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 1400

 Score = 30.7 bits (66), Expect = 0.74
 Identities = 21/76 (27%), Positives = 38/76 (50%)
 Frame = +2

Query: 266 FKNFEKNKDAWLEKAKLNDGVYAPCEIPLSESDSDEMIKLNIKLNDRLYETVNSVKDKLT 445
           F   E ++ A++ KA      +A    PLS S   E+  +  +L+DR      +  D+L 
Sbjct: 282 FPEVEDDEAAYIGKAGFKPNAFARESHPLSPSQKAELSAIGARLSDRYGGQNKNTLDELH 341

Query: 446 EMAHVKNLFDRKPSLK 493
           E A + +L D++ ++K
Sbjct: 342 E-ALLSDLQDQEMAVK 356


>SB_47539| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 515

 Score = 27.5 bits (58), Expect = 6.9
 Identities = 18/84 (21%), Positives = 39/84 (46%), Gaps = 1/84 (1%)
 Frame = +2

Query: 2   LXVSSKFQINMALGSISSITNTERFSNMYLPMLWFDIRMYSLPPSLEQRFKLYLNILPI- 178
           L    + QIN+ +  +  I  T+   +++LP+L+ +    ++  +     K  + +LP  
Sbjct: 403 LSSGKRLQINIFIEPVEDIKQTQGLGSLFLPILYIN-ETATIDSATADMIKGKV-LLPFK 460

Query: 179 VEQAAMYIMFITGAVLVITTIYIL 250
           V     + +   G VL++  I +L
Sbjct: 461 VAHGVEFAVIAIGLVLIVVAIVLL 484


>SB_45885| Best HMM Match : efhand (HMM E-Value=5.9e-05)
          Length = 611

 Score = 27.5 bits (58), Expect = 6.9
 Identities = 23/87 (26%), Positives = 39/87 (44%), Gaps = 2/87 (2%)
 Frame = +2

Query: 206 FITGAVLVITTIYILSFKVMFKNFEKNKDAWLEKAKLNDGVYAPCEIPLSESDSDEMIKL 385
           FI G  L +        +V+FK F+ ++D  + K +L   + +  E      D+ E    
Sbjct: 166 FIGGIALCLHGSVRDKCRVLFKVFDLDEDDGVSKDELTAVLLSSLESAEKILDNMEEPSS 225

Query: 386 NIKLN--DRLYETVNSVKDKLTEMAHV 460
               +  DRL ETV  + D+  + +HV
Sbjct: 226 GCTADNTDRLIETVTKIVDEAFKKSHV 252


>SB_59366| Best HMM Match : 7tm_1 (HMM E-Value=5.2e-23)
          Length = 363

 Score = 27.1 bits (57), Expect = 9.2
 Identities = 10/34 (29%), Positives = 20/34 (58%)
 Frame = +2

Query: 197 YIMFITGAVLVITTIYILSFKVMFKNFEKNKDAW 298
           + +F   AV+    +Y+L++  +FK F+K   +W
Sbjct: 168 HFVFTNTAVVATFFVYMLTYFKVFKRFKKEVKSW 201


>SB_33958| Best HMM Match : MAM (HMM E-Value=1.1e-32)
          Length = 1052

 Score = 27.1 bits (57), Expect = 9.2
 Identities = 14/43 (32%), Positives = 22/43 (51%), Gaps = 1/43 (2%)
 Frame = +3

Query: 33   WHSVAYPASRTRKDSPICTYRCSGSISE-CTRFHLHWSKDSNY 158
            W  V+Y  + T +D+P+  ++ S S+S   T F      D NY
Sbjct: 945  WKQVSYKQTTTMRDNPV--FKSSASLSHVITSFDAPRDADENY 985


  Database: nematostella
    Posted date:  Oct 22, 2007  1:22 PM
  Number of letters in database: 16,821,457
  Number of sequences in database:  59,808
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,924,285
Number of Sequences: 59808
Number of extensions: 245965
Number of successful extensions: 741
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 691
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 735
length of database: 16,821,457
effective HSP length: 77
effective length of database: 12,216,241
effective search space used: 1148326654
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)