Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= epV30423
(516 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U41545-6|AAK39135.1| 1130|Caenorhabditis elegans Temporarily ass... 29 2.0
Z70037-1|CAA93878.1| 493|Caenorhabditis elegans Hypothetical pr... 28 3.4
Z92806-3|CAB07256.1| 202|Caenorhabditis elegans Hypothetical pr... 28 4.6
Z68222-10|CAA92505.3| 1701|Caenorhabditis elegans Hypothetical p... 27 6.0
Z68218-5|CAA92475.3| 1701|Caenorhabditis elegans Hypothetical pr... 27 6.0
AL034488-1|CAA22455.1| 625|Caenorhabditis elegans Hypothetical ... 27 6.0
Z93398-7|CAD90188.2| 4955|Caenorhabditis elegans Hypothetical pr... 27 8.0
Z93398-6|CAD90187.2| 4944|Caenorhabditis elegans Hypothetical pr... 27 8.0
Z93398-4|CAH04743.1| 4410|Caenorhabditis elegans Hypothetical pr... 27 8.0
Z92788-7|CAD90177.2| 4955|Caenorhabditis elegans Hypothetical pr... 27 8.0
Z92788-6|CAD90176.2| 4944|Caenorhabditis elegans Hypothetical pr... 27 8.0
Z92788-4|CAH04711.1| 4410|Caenorhabditis elegans Hypothetical pr... 27 8.0
U29381-14|ABI54346.1| 1840|Caenorhabditis elegans Hypothetical p... 27 8.0
U29381-13|ABI54348.1| 1898|Caenorhabditis elegans Hypothetical p... 27 8.0
U29381-12|AAM98022.3| 1671|Caenorhabditis elegans Hypothetical p... 27 8.0
U29381-11|ABI54347.1| 1911|Caenorhabditis elegans Hypothetical p... 27 8.0
AL031637-4|CAD90184.2| 4955|Caenorhabditis elegans Hypothetical ... 27 8.0
AL031637-3|CAD90183.2| 4944|Caenorhabditis elegans Hypothetical ... 27 8.0
AL031637-2|CAH04759.1| 4410|Caenorhabditis elegans Hypothetical ... 27 8.0
AJ505905-1|CAD44516.1| 3522|Caenorhabditis elegans VAB-10B prote... 27 8.0
AJ505816-1|CAD44324.1| 4944|Caenorhabditis elegans VAB-10B prote... 27 8.0
>U41545-6|AAK39135.1| 1130|Caenorhabditis elegans Temporarily
assigned gene nameprotein 278 protein.
Length = 1130
Score = 29.1 bits (62), Expect = 2.0
Identities = 24/76 (31%), Positives = 42/76 (55%), Gaps = 1/76 (1%)
Frame = +2
Query: 278 EKNKDAWLEKAKLNDGVYAPCEIPLSESDSDEMIKLNIKLNDRLYETVNSVKDKLTEM-A 454
E KD+ LEK A EI S S SD++ KL++++ND L + + ++KD+L +
Sbjct: 725 ETEKDSELEKT------IAQLEIDNS-SKSDQIEKLHLRVNDML-DQMGTIKDELVKKNE 776
Query: 455 HVKNLFDRKPSLKDSS 502
+K + + L +S+
Sbjct: 777 EIKTISAKTAQLLESN 792
>Z70037-1|CAA93878.1| 493|Caenorhabditis elegans Hypothetical
protein T27D12.1 protein.
Length = 493
Score = 28.3 bits (60), Expect = 3.4
Identities = 11/20 (55%), Positives = 15/20 (75%)
Frame = +2
Query: 197 YIMFITGAVLVITTIYILSF 256
Y+ ITGAV+VIT I+ + F
Sbjct: 428 YVFLITGAVMVITNIFFVIF 447
>Z92806-3|CAB07256.1| 202|Caenorhabditis elegans Hypothetical
protein K10G4.3 protein.
Length = 202
Score = 27.9 bits (59), Expect = 4.6
Identities = 14/49 (28%), Positives = 26/49 (53%)
Frame = +2
Query: 350 LSESDSDEMIKLNIKLNDRLYETVNSVKDKLTEMAHVKNLFDRKPSLKD 496
+SE + N + ND++YE + K+K+ KN+++R L+D
Sbjct: 111 ISEFQRQLDLNRNNQNNDKIYEAIKKEKEKIR-----KNVYERNEQLRD 154
>Z68222-10|CAA92505.3| 1701|Caenorhabditis elegans Hypothetical
protein ZK1251.9 protein.
Length = 1701
Score = 27.5 bits (58), Expect = 6.0
Identities = 24/74 (32%), Positives = 34/74 (45%), Gaps = 7/74 (9%)
Frame = +2
Query: 296 WLEKAKLNDGVYA-----PCEIPLSESDSDEMIKLNIKLNDRLYETVNSVKDKLTEMAH- 457
W E K DG+ A C+IPL+E+DS N + V + KL +AH
Sbjct: 728 WTEVRK-TDGIMALVNLINCKIPLTEADSIRKTATNTLTGLARHPEVRQILAKLPLIAHN 786
Query: 458 -VKNLFDRKPSLKD 496
++NL R+P D
Sbjct: 787 GLQNLM-REPVCSD 799
>Z68218-5|CAA92475.3| 1701|Caenorhabditis elegans Hypothetical
protein ZK1251.9 protein.
Length = 1701
Score = 27.5 bits (58), Expect = 6.0
Identities = 24/74 (32%), Positives = 34/74 (45%), Gaps = 7/74 (9%)
Frame = +2
Query: 296 WLEKAKLNDGVYA-----PCEIPLSESDSDEMIKLNIKLNDRLYETVNSVKDKLTEMAH- 457
W E K DG+ A C+IPL+E+DS N + V + KL +AH
Sbjct: 728 WTEVRK-TDGIMALVNLINCKIPLTEADSIRKTATNTLTGLARHPEVRQILAKLPLIAHN 786
Query: 458 -VKNLFDRKPSLKD 496
++NL R+P D
Sbjct: 787 GLQNLM-REPVCSD 799
>AL034488-1|CAA22455.1| 625|Caenorhabditis elegans Hypothetical
protein Y54G11A.1 protein.
Length = 625
Score = 27.5 bits (58), Expect = 6.0
Identities = 10/19 (52%), Positives = 15/19 (78%)
Frame = -2
Query: 374 FHRSRSPRVVSRMARTLHH 318
FHR +SPR++S+M R H+
Sbjct: 552 FHRLQSPRLLSKMPRNSHN 570
>Z93398-7|CAD90188.2| 4955|Caenorhabditis elegans Hypothetical protein
ZK1151.1c protein.
Length = 4955
Score = 27.1 bits (57), Expect = 8.0
Identities = 15/51 (29%), Positives = 27/51 (52%)
Frame = +2
Query: 290 DAWLEKAKLNDGVYAPCEIPLSESDSDEMIKLNIKLNDRLYETVNSVKDKL 442
D+WL+ A + + A ++P++ ++EMI L D L + +KD L
Sbjct: 3006 DSWLQSA--DKRLQALAKVPITVEKAEEMIGEQEALQDELEHKSDDLKDVL 3054
>Z93398-6|CAD90187.2| 4944|Caenorhabditis elegans Hypothetical protein
ZK1151.1b protein.
Length = 4944
Score = 27.1 bits (57), Expect = 8.0
Identities = 15/51 (29%), Positives = 27/51 (52%)
Frame = +2
Query: 290 DAWLEKAKLNDGVYAPCEIPLSESDSDEMIKLNIKLNDRLYETVNSVKDKL 442
D+WL+ A + + A ++P++ ++EMI L D L + +KD L
Sbjct: 3006 DSWLQSA--DKRLQALAKVPITVEKAEEMIGEQEALQDELEHKSDDLKDVL 3054
>Z93398-4|CAH04743.1| 4410|Caenorhabditis elegans Hypothetical protein
ZK1151.1g protein.
Length = 4410
Score = 27.1 bits (57), Expect = 8.0
Identities = 15/51 (29%), Positives = 27/51 (52%)
Frame = +2
Query: 290 DAWLEKAKLNDGVYAPCEIPLSESDSDEMIKLNIKLNDRLYETVNSVKDKL 442
D+WL+ A + + A ++P++ ++EMI L D L + +KD L
Sbjct: 2461 DSWLQSA--DKRLQALAKVPITVEKAEEMIGEQEALQDELEHKSDDLKDVL 2509
>Z92788-7|CAD90177.2| 4955|Caenorhabditis elegans Hypothetical protein
ZK1151.1c protein.
Length = 4955
Score = 27.1 bits (57), Expect = 8.0
Identities = 15/51 (29%), Positives = 27/51 (52%)
Frame = +2
Query: 290 DAWLEKAKLNDGVYAPCEIPLSESDSDEMIKLNIKLNDRLYETVNSVKDKL 442
D+WL+ A + + A ++P++ ++EMI L D L + +KD L
Sbjct: 3006 DSWLQSA--DKRLQALAKVPITVEKAEEMIGEQEALQDELEHKSDDLKDVL 3054
>Z92788-6|CAD90176.2| 4944|Caenorhabditis elegans Hypothetical protein
ZK1151.1b protein.
Length = 4944
Score = 27.1 bits (57), Expect = 8.0
Identities = 15/51 (29%), Positives = 27/51 (52%)
Frame = +2
Query: 290 DAWLEKAKLNDGVYAPCEIPLSESDSDEMIKLNIKLNDRLYETVNSVKDKL 442
D+WL+ A + + A ++P++ ++EMI L D L + +KD L
Sbjct: 3006 DSWLQSA--DKRLQALAKVPITVEKAEEMIGEQEALQDELEHKSDDLKDVL 3054
>Z92788-4|CAH04711.1| 4410|Caenorhabditis elegans Hypothetical protein
ZK1151.1g protein.
Length = 4410
Score = 27.1 bits (57), Expect = 8.0
Identities = 15/51 (29%), Positives = 27/51 (52%)
Frame = +2
Query: 290 DAWLEKAKLNDGVYAPCEIPLSESDSDEMIKLNIKLNDRLYETVNSVKDKL 442
D+WL+ A + + A ++P++ ++EMI L D L + +KD L
Sbjct: 2461 DSWLQSA--DKRLQALAKVPITVEKAEEMIGEQEALQDELEHKSDDLKDVL 2509
>U29381-14|ABI54346.1| 1840|Caenorhabditis elegans Hypothetical
protein F35D11.11a protein.
Length = 1840
Score = 27.1 bits (57), Expect = 8.0
Identities = 14/69 (20%), Positives = 39/69 (56%), Gaps = 2/69 (2%)
Frame = +1
Query: 250 QLQGDVQELRKEQGRL--AREGQAE*WSVRAMRDTTLGERLR*NDQIKHQIK*QAIRNRQ 423
+L+ ++ + K+ L +EG +E W+ + L ++LR +++ H ++ + + N +
Sbjct: 1030 KLKDELAVMLKQNSELKNGKEGLSEKWNEERKKIQDLADQLREANKVVHNMRMKNV-NLE 1088
Query: 424 QRQGQTDRN 450
+++ + D+N
Sbjct: 1089 EKKNELDQN 1097
>U29381-13|ABI54348.1| 1898|Caenorhabditis elegans Hypothetical
protein F35D11.11c protein.
Length = 1898
Score = 27.1 bits (57), Expect = 8.0
Identities = 14/69 (20%), Positives = 39/69 (56%), Gaps = 2/69 (2%)
Frame = +1
Query: 250 QLQGDVQELRKEQGRL--AREGQAE*WSVRAMRDTTLGERLR*NDQIKHQIK*QAIRNRQ 423
+L+ ++ + K+ L +EG +E W+ + L ++LR +++ H ++ + + N +
Sbjct: 1030 KLKDELAVMLKQNSELKNGKEGLSEKWNEERKKIQDLADQLREANKVVHNMRMKNV-NLE 1088
Query: 424 QRQGQTDRN 450
+++ + D+N
Sbjct: 1089 EKKNELDQN 1097
>U29381-12|AAM98022.3| 1671|Caenorhabditis elegans Hypothetical
protein F35D11.11d protein.
Length = 1671
Score = 27.1 bits (57), Expect = 8.0
Identities = 14/69 (20%), Positives = 39/69 (56%), Gaps = 2/69 (2%)
Frame = +1
Query: 250 QLQGDVQELRKEQGRL--AREGQAE*WSVRAMRDTTLGERLR*NDQIKHQIK*QAIRNRQ 423
+L+ ++ + K+ L +EG +E W+ + L ++LR +++ H ++ + + N +
Sbjct: 790 KLKDELAVMLKQNSELKNGKEGLSEKWNEERKKIQDLADQLREANKVVHNMRMKNV-NLE 848
Query: 424 QRQGQTDRN 450
+++ + D+N
Sbjct: 849 EKKNELDQN 857
>U29381-11|ABI54347.1| 1911|Caenorhabditis elegans Hypothetical
protein F35D11.11b protein.
Length = 1911
Score = 27.1 bits (57), Expect = 8.0
Identities = 14/69 (20%), Positives = 39/69 (56%), Gaps = 2/69 (2%)
Frame = +1
Query: 250 QLQGDVQELRKEQGRL--AREGQAE*WSVRAMRDTTLGERLR*NDQIKHQIK*QAIRNRQ 423
+L+ ++ + K+ L +EG +E W+ + L ++LR +++ H ++ + + N +
Sbjct: 1030 KLKDELAVMLKQNSELKNGKEGLSEKWNEERKKIQDLADQLREANKVVHNMRMKNV-NLE 1088
Query: 424 QRQGQTDRN 450
+++ + D+N
Sbjct: 1089 EKKNELDQN 1097
>AL031637-4|CAD90184.2| 4955|Caenorhabditis elegans Hypothetical
protein ZK1151.1c protein.
Length = 4955
Score = 27.1 bits (57), Expect = 8.0
Identities = 15/51 (29%), Positives = 27/51 (52%)
Frame = +2
Query: 290 DAWLEKAKLNDGVYAPCEIPLSESDSDEMIKLNIKLNDRLYETVNSVKDKL 442
D+WL+ A + + A ++P++ ++EMI L D L + +KD L
Sbjct: 3006 DSWLQSA--DKRLQALAKVPITVEKAEEMIGEQEALQDELEHKSDDLKDVL 3054
>AL031637-3|CAD90183.2| 4944|Caenorhabditis elegans Hypothetical
protein ZK1151.1b protein.
Length = 4944
Score = 27.1 bits (57), Expect = 8.0
Identities = 15/51 (29%), Positives = 27/51 (52%)
Frame = +2
Query: 290 DAWLEKAKLNDGVYAPCEIPLSESDSDEMIKLNIKLNDRLYETVNSVKDKL 442
D+WL+ A + + A ++P++ ++EMI L D L + +KD L
Sbjct: 3006 DSWLQSA--DKRLQALAKVPITVEKAEEMIGEQEALQDELEHKSDDLKDVL 3054
>AL031637-2|CAH04759.1| 4410|Caenorhabditis elegans Hypothetical
protein ZK1151.1g protein.
Length = 4410
Score = 27.1 bits (57), Expect = 8.0
Identities = 15/51 (29%), Positives = 27/51 (52%)
Frame = +2
Query: 290 DAWLEKAKLNDGVYAPCEIPLSESDSDEMIKLNIKLNDRLYETVNSVKDKL 442
D+WL+ A + + A ++P++ ++EMI L D L + +KD L
Sbjct: 2461 DSWLQSA--DKRLQALAKVPITVEKAEEMIGEQEALQDELEHKSDDLKDVL 2509
>AJ505905-1|CAD44516.1| 3522|Caenorhabditis elegans VAB-10B protein
protein.
Length = 3522
Score = 27.1 bits (57), Expect = 8.0
Identities = 15/51 (29%), Positives = 27/51 (52%)
Frame = +2
Query: 290 DAWLEKAKLNDGVYAPCEIPLSESDSDEMIKLNIKLNDRLYETVNSVKDKL 442
D+WL+ A + + A ++P++ ++EMI L D L + +KD L
Sbjct: 3006 DSWLQSA--DKRLQALAKVPITVEKAEEMIGEQEALQDELEHKSDDLKDVL 3054
>AJ505816-1|CAD44324.1| 4944|Caenorhabditis elegans VAB-10B protein
protein.
Length = 4944
Score = 27.1 bits (57), Expect = 8.0
Identities = 15/51 (29%), Positives = 27/51 (52%)
Frame = +2
Query: 290 DAWLEKAKLNDGVYAPCEIPLSESDSDEMIKLNIKLNDRLYETVNSVKDKL 442
D+WL+ A + + A ++P++ ++EMI L D L + +KD L
Sbjct: 3006 DSWLQSA--DKRLQALAKVPITVEKAEEMIGEQEALQDELEHKSDDLKDVL 3054
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 10,198,041
Number of Sequences: 27780
Number of extensions: 182002
Number of successful extensions: 712
Number of sequences better than 10.0: 21
Number of HSP's better than 10.0 without gapping: 691
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 712
length of database: 12,740,198
effective HSP length: 77
effective length of database: 10,601,138
effective search space used: 996506972
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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