Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= epV30423
(516 letters)
Database: bee
438 sequences; 146,343 total letters
Searching......................................................done
Score E
Sequences producing significant alignments: (bits) Value
AM076717-1|CAJ28210.1| 501|Apis mellifera serotonin receptor pr... 22 3.3
AY463910-1|AAR24352.1| 843|Apis mellifera metabotropic glutamat... 21 5.7
AF514804-1|AAM51823.1| 537|Apis mellifera neuronal nicotinic ac... 21 5.7
AB161181-1|BAD08343.1| 933|Apis mellifera metabotropic glutamat... 21 5.7
EF625897-1|ABR45904.1| 684|Apis mellifera hexamerin protein. 21 7.5
EF591128-1|ABQ59246.1| 684|Apis mellifera hexamerin 70a protein. 21 7.5
AJ849455-1|CAH60991.1| 366|Apis mellifera twist protein protein. 21 7.5
AB269871-1|BAF03050.1| 1923|Apis mellifera cell adhesion molecul... 21 7.5
AB257298-1|BAE93381.1| 1919|Apis mellifera Dscam family member A... 21 7.5
DQ325103-1|ABD14117.1| 182|Apis mellifera complementary sex det... 21 10.0
DQ071552-1|AAY82248.1| 495|Apis mellifera anarchy 1 protein. 21 10.0
DQ069332-1|AAZ32217.1| 296|Apis mellifera RNA polymerase II lar... 21 10.0
AY540846-1|AAS48080.1| 541|Apis mellifera neuronal nicotinic ac... 21 10.0
>AM076717-1|CAJ28210.1| 501|Apis mellifera serotonin receptor
protein.
Length = 501
Score = 22.2 bits (45), Expect = 3.3
Identities = 9/28 (32%), Positives = 14/28 (50%)
Frame = +2
Query: 56 ITNTERFSNMYLPMLWFDIRMYSLPPSL 139
+ T R +Y+ ++W SLPP L
Sbjct: 151 VKRTPRRMIVYVSLVWLGAACISLPPLL 178
>AY463910-1|AAR24352.1| 843|Apis mellifera metabotropic glutamate
receptor 1 protein.
Length = 843
Score = 21.4 bits (43), Expect = 5.7
Identities = 7/38 (18%), Positives = 22/38 (57%)
Frame = +2
Query: 176 IVEQAAMYIMFITGAVLVITTIYILSFKVMFKNFEKNK 289
I + + ++ +++I+T+Y + + + +NF ++K
Sbjct: 669 IQDMSFLFSQLYNALLILISTVYAVKTRKIPENFNESK 706
>AF514804-1|AAM51823.1| 537|Apis mellifera neuronal nicotinic
acetylcholine receptoralpha-3 protein.
Length = 537
Score = 21.4 bits (43), Expect = 5.7
Identities = 8/19 (42%), Positives = 10/19 (52%)
Frame = +3
Query: 33 WHSVAYPASRTRKDSPICT 89
W + PASR + P CT
Sbjct: 215 WDILEVPASRNEEYYPCCT 233
>AB161181-1|BAD08343.1| 933|Apis mellifera metabotropic glutamate
receptor protein.
Length = 933
Score = 21.4 bits (43), Expect = 5.7
Identities = 7/38 (18%), Positives = 22/38 (57%)
Frame = +2
Query: 176 IVEQAAMYIMFITGAVLVITTIYILSFKVMFKNFEKNK 289
I + + ++ +++I+T+Y + + + +NF ++K
Sbjct: 759 IQDMSFLFSQLYNALLILISTVYAVKTRKIPENFNESK 796
>EF625897-1|ABR45904.1| 684|Apis mellifera hexamerin protein.
Length = 684
Score = 21.0 bits (42), Expect = 7.5
Identities = 9/21 (42%), Positives = 11/21 (52%)
Frame = -1
Query: 129 GSEYILISNQSIGRYILENLS 67
G EY+ + RY LE LS
Sbjct: 256 GEEYLYSHKLLLNRYYLERLS 276
>EF591128-1|ABQ59246.1| 684|Apis mellifera hexamerin 70a protein.
Length = 684
Score = 21.0 bits (42), Expect = 7.5
Identities = 9/21 (42%), Positives = 11/21 (52%)
Frame = -1
Query: 129 GSEYILISNQSIGRYILENLS 67
G EY+ + RY LE LS
Sbjct: 256 GEEYLYSHKLLLNRYYLERLS 276
>AJ849455-1|CAH60991.1| 366|Apis mellifera twist protein protein.
Length = 366
Score = 21.0 bits (42), Expect = 7.5
Identities = 8/15 (53%), Positives = 11/15 (73%)
Frame = +1
Query: 52 QHHEHGKILQYVPTD 96
Q H +GKIL+ + TD
Sbjct: 101 QEHPNGKILRELQTD 115
>AB269871-1|BAF03050.1| 1923|Apis mellifera cell adhesion molecule
AbsCAM-Ig7B protein.
Length = 1923
Score = 21.0 bits (42), Expect = 7.5
Identities = 9/22 (40%), Positives = 12/22 (54%)
Frame = +3
Query: 48 YPASRTRKDSPICTYRCSGSIS 113
+PA+ R+D YRC S S
Sbjct: 92 FPAAAFRQDVHSAAYRCVASNS 113
>AB257298-1|BAE93381.1| 1919|Apis mellifera Dscam family member
AbsCAM-Ig7A protein.
Length = 1919
Score = 21.0 bits (42), Expect = 7.5
Identities = 9/22 (40%), Positives = 12/22 (54%)
Frame = +3
Query: 48 YPASRTRKDSPICTYRCSGSIS 113
+PA+ R+D YRC S S
Sbjct: 92 FPAAAFRQDVHSAAYRCVASNS 113
>DQ325103-1|ABD14117.1| 182|Apis mellifera complementary sex
determiner protein.
Length = 182
Score = 20.6 bits (41), Expect = 10.0
Identities = 6/18 (33%), Positives = 13/18 (72%)
Frame = -2
Query: 368 RSRSPRVVSRMARTLHHS 315
RSR P+++S ++ ++S
Sbjct: 75 RSREPKIISSLSNNYNYS 92
>DQ071552-1|AAY82248.1| 495|Apis mellifera anarchy 1 protein.
Length = 495
Score = 20.6 bits (41), Expect = 10.0
Identities = 8/17 (47%), Positives = 12/17 (70%)
Frame = +2
Query: 398 NDRLYETVNSVKDKLTE 448
ND + E+++ VKD TE
Sbjct: 180 NDNILESISYVKDDGTE 196
>DQ069332-1|AAZ32217.1| 296|Apis mellifera RNA polymerase II large
subunit protein.
Length = 296
Score = 20.6 bits (41), Expect = 10.0
Identities = 11/28 (39%), Positives = 16/28 (57%)
Frame = +2
Query: 380 KLNIKLNDRLYETVNSVKDKLTEMAHVK 463
++N LND +T S K LTE ++K
Sbjct: 201 QVNRILNDARDKTGGSAKKSLTEYNNLK 228
>AY540846-1|AAS48080.1| 541|Apis mellifera neuronal nicotinic
acetylcholine receptorApisa2 subunit protein.
Length = 541
Score = 20.6 bits (41), Expect = 10.0
Identities = 7/26 (26%), Positives = 16/26 (61%)
Frame = +2
Query: 170 LPIVEQAAMYIMFITGAVLVITTIYI 247
LP++ + ++ M + G +VIT + +
Sbjct: 295 LPLLGKYLLFTMILVGLSVVITIVIL 320
Database: bee
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 146,343
Number of sequences in database: 438
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 121,103
Number of Sequences: 438
Number of extensions: 2233
Number of successful extensions: 13
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 13
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 13
length of database: 146,343
effective HSP length: 54
effective length of database: 122,691
effective search space used: 14354847
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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