Bombyx BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= epV30422
         (516 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_P19351 Cluster: Troponin T, skeletal muscle; n=46; Panc...   101   1e-20
UniRef50_UPI0000D555FF Cluster: PREDICTED: similar to CG7107-PG,...    97   3e-19
UniRef50_Q98SG2 Cluster: Putative uncharacterized protein; n=1; ...    34   1.7  
UniRef50_Q3LZQ7 Cluster: Putative uncharacterized protein; n=1; ...    33   3.9  

>UniRef50_P19351 Cluster: Troponin T, skeletal muscle; n=46;
           Pancrustacea|Rep: Troponin T, skeletal muscle -
           Drosophila melanogaster (Fruit fly)
          Length = 397

 Score =  101 bits (241), Expect = 1e-20
 Identities = 42/61 (68%), Positives = 52/61 (85%)
 Frame = -2

Query: 515 DTRSYDDKKKLFEGDLEKLNKDFLEKVWQERAEQFGGRQKARLPKWFGERPGKKKGELES 336
           DTRSYDDKKKLFEG  ++++KD  EK+W E+ EQ+ GRQK++LPKWFGERPGKK GE E+
Sbjct: 273 DTRSYDDKKKLFEGGWDEISKDSNEKIWNEKKEQYTGRQKSKLPKWFGERPGKKAGEPET 332

Query: 335 P 333
           P
Sbjct: 333 P 333


>UniRef50_UPI0000D555FF Cluster: PREDICTED: similar to CG7107-PG,
           isoform G isoform 3; n=1; Tribolium castaneum|Rep:
           PREDICTED: similar to CG7107-PG, isoform G isoform 3 -
           Tribolium castaneum
          Length = 352

 Score = 96.7 bits (230), Expect = 3e-19
 Identities = 40/61 (65%), Positives = 51/61 (83%)
 Frame = -2

Query: 515 DTRSYDDKKKLFEGDLEKLNKDFLEKVWQERAEQFGGRQKARLPKWFGERPGKKKGELES 336
           DTRSYDDKKKLFEG  E++ K+  EK+W+++  QF  RQK++LPKWFGERPGKKKG+ E+
Sbjct: 243 DTRSYDDKKKLFEGGYEEITKETNEKLWKDKIGQFDSRQKSKLPKWFGERPGKKKGDPET 302

Query: 335 P 333
           P
Sbjct: 303 P 303


>UniRef50_Q98SG2 Cluster: Putative uncharacterized protein; n=1;
           Salmo salar|Rep: Putative uncharacterized protein -
           Salmo salar (Atlantic salmon)
          Length = 400

 Score = 34.3 bits (75), Expect = 1.7
 Identities = 19/55 (34%), Positives = 29/55 (52%)
 Frame = -2

Query: 497 DKKKLFEGDLEKLNKDFLEKVWQERAEQFGGRQKARLPKWFGERPGKKKGELESP 333
           D+ +L E DLE+L  +  E+  +E  E+ G R+K  +PK F  R   +K     P
Sbjct: 226 DEDELDEEDLEELEAELDEQEGEELNERKGNRRKRHIPKQFRGRGHSRKPPPRKP 280


>UniRef50_Q3LZQ7 Cluster: Putative uncharacterized protein; n=1;
           Acyrthosiphon pisum secondary endosymbiont phage 2|Rep:
           Putative uncharacterized protein - Acyrthosiphon pisum
           secondary endosymbiont phage 2
          Length = 254

 Score = 33.1 bits (72), Expect = 3.9
 Identities = 16/42 (38%), Positives = 24/42 (57%)
 Frame = -2

Query: 503 YDDKKKLFEGDLEKLNKDFLEKVWQERAEQFGGRQKARLPKW 378
           ++D   L+E +L+ LN   +EKV+  RA+  GG  K   P W
Sbjct: 55  FNDNTPLYEWELKALNLTIVEKVF-NRAKNGGGFYKKNYPSW 95


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 300,571,330
Number of Sequences: 1657284
Number of extensions: 4044944
Number of successful extensions: 15297
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 14964
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 15287
length of database: 575,637,011
effective HSP length: 95
effective length of database: 418,195,031
effective search space used: 31782822356
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)