Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= epV30422
         (516 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF125969-2|AAD14761.1|  613|Caenorhabditis elegans Caenorhabditi...    27   6.0  
Z70270-3|CAA94227.1|  153|Caenorhabditis elegans Hypothetical pr...    27   8.0  

>AF125969-2|AAD14761.1|  613|Caenorhabditis elegans Caenorhabditis
           gtp-binding proteinprotein 1 protein.
          Length = 613

 Score = 27.5 bits (58), Expect = 6.0
 Identities = 16/37 (43%), Positives = 22/37 (59%), Gaps = 2/37 (5%)
 Frame = -2

Query: 443 EKVWQERAEQFGGRQKARLPKWFGERP--GKKKGELE 339
           E + Q+RA+Q  GRQK    K  G +P  GK K ++E
Sbjct: 555 ESLAQQRAKQKDGRQKQYGKKSMGPKPPNGKPKEKIE 591


>Z70270-3|CAA94227.1|  153|Caenorhabditis elegans Hypothetical
           protein C53D6.5 protein.
          Length = 153

 Score = 27.1 bits (57), Expect = 8.0
 Identities = 12/30 (40%), Positives = 18/30 (60%)
 Frame = -2

Query: 512 TRSYDDKKKLFEGDLEKLNKDFLEKVWQER 423
           T   + ++KL +  L+K   D L+K WQER
Sbjct: 88  TEKLEIEQKLKDPKLDKATSDELKKQWQER 117


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 6,802,194
Number of Sequences: 27780
Number of extensions: 92735
Number of successful extensions: 367
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 365
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 367
length of database: 12,740,198
effective HSP length: 77
effective length of database: 10,601,138
effective search space used: 996506972
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)