BLASTX 2.2.12 [Aug-07-2005] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= epV30418 (516 letters) Database: nematostella 59,808 sequences; 16,821,457 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value SB_33375| Best HMM Match : ADK (HMM E-Value=1.6e-30) 120 5e-28 SB_13785| Best HMM Match : No HMM Matches (HMM E-Value=.) 81 4e-16 SB_58530| Best HMM Match : No HMM Matches (HMM E-Value=.) 81 7e-16 SB_19245| Best HMM Match : ADK (HMM E-Value=0) 79 2e-15 SB_28550| Best HMM Match : Fer2_2 (HMM E-Value=2.49992e-42) 46 2e-05 SB_33720| Best HMM Match : No HMM Matches (HMM E-Value=.) 36 2e-04 SB_31065| Best HMM Match : ADK (HMM E-Value=1.5e-31) 40 0.002 SB_379| Best HMM Match : ADK (HMM E-Value=3.2e-05) 35 0.035 SB_4186| Best HMM Match : ADK (HMM E-Value=0.094) 34 0.060 SB_43624| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 0.56 SB_16493| Best HMM Match : NACHT (HMM E-Value=1.1e-08) 30 0.98 SB_43601| Best HMM Match : ADK (HMM E-Value=2.3e-05) 29 1.7 SB_18188| Best HMM Match : SRP54 (HMM E-Value=0) 29 2.3 SB_36947| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 2.3 SB_35426| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 2.3 SB_12814| Best HMM Match : IncA (HMM E-Value=1.7) 28 5.3 SB_2656| Best HMM Match : IncA (HMM E-Value=1.7) 28 5.3 SB_57096| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 6.9 SB_18559| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 6.9 SB_29339| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 6.9 SB_40225| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 9.2 SB_21353| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 9.2 SB_26671| Best HMM Match : zf-TRAF (HMM E-Value=0.54) 27 9.2 >SB_33375| Best HMM Match : ADK (HMM E-Value=1.6e-30) Length = 297 Score = 120 bits (290), Expect = 5e-28 Identities = 55/105 (52%), Positives = 76/105 (72%) Frame = +3 Query: 81 IDTSKKPIVWVLGGPGSGKGTQCDKIVAKYGFTHLSTGDLLRAEVKSGSERAKCLTAIME 260 ++ S + IV++LGGPG+GKGT CD +V KY + HLS GDLLR EV G+ER + +T +M Sbjct: 111 VEFSGQRIVYILGGPGAGKGTICDSVVKKYNYCHLSAGDLLREEVTRGNERGQMITEMMR 170 Query: 261 RGELVPNEIVLDLLKEAILARAEESKGFLIDGYPREKSQGIAFEE 395 G+LVP EI + LL++A + ++ GFLIDG+PR+ QGI FEE Sbjct: 171 EGKLVPKEITIGLLQDA-MREHKDMPGFLIDGFPRDIDQGITFEE 214 Score = 52.8 bits (121), Expect = 2e-07 Identities = 21/59 (35%), Positives = 33/59 (55%) Frame = +3 Query: 105 VWVLGGPGSGKGTQCDKIVAKYGFTHLSTGDLLRAEVKSGSERAKCLTAIMERGELVPN 281 +W GGP +GK T C + ++ +TH+ G L+ E + ++RAK L + G VPN Sbjct: 239 IWSKGGPATGKKTHCKHVAERFNYTHIMPGTLVAQEAQKDTDRAKQLIQTISAGNDVPN 297 >SB_13785| Best HMM Match : No HMM Matches (HMM E-Value=.) Length = 386 Score = 81.4 bits (192), Expect = 4e-16 Identities = 38/76 (50%), Positives = 55/76 (72%) Frame = +3 Query: 285 IVLDLLKEAILARAEESKGFLIDGYPREKSQGIAFEENIAPVSVIIYFEASSETLTQRLL 464 I+L+LL+ A++ + + GFLIDG+PRE QG+ FE+ +A +++YFE S +T+ RLL Sbjct: 2 IILELLRLAMV-KQPNTTGFLIDGFPRELEQGLEFEKELALCELLLYFECSPDTMKARLL 60 Query: 465 GRAASSGRADDNEETI 512 R +SGR DDNEETI Sbjct: 61 KRGETSGRVDDNEETI 76 Score = 81.0 bits (191), Expect = 5e-16 Identities = 45/138 (32%), Positives = 75/138 (54%) Frame = +3 Query: 102 IVWVLGGPGSGKGTQCDKIVAKYGFTHLSTGDLLRAEVKSGSERAKCLTAIMERGELVPN 281 I++++GGPGSGK ++ G THLS G LL+ E ++R + + + G LV Sbjct: 136 IMFIVGGPGSGKAELAKRLAESSGRTHLSMGQLLKEEATKDTDRGREVAQAIAMGTLVSP 195 Query: 282 EIVLDLLKEAILARAEESKGFLIDGYPREKSQGIAFEENIAPVSVIIYFEASSETLTQRL 461 E L++L E I++ + +G+++DG+PR Q F E ++ + ++ E S E + +RL Sbjct: 196 EHALNILTEKIVSDEKNLEGYVVDGFPRSHEQAKNFTEKVSDFNRVVALECSDEEM-ERL 254 Query: 462 LGRAASSGRADDNEETIK 515 A A NEE +K Sbjct: 255 ---AKEKLGAALNEEQLK 269 Score = 44.0 bits (99), Expect = 7e-05 Identities = 22/47 (46%), Positives = 34/47 (72%), Gaps = 1/47 (2%) Frame = +3 Query: 102 IVWVLGGPGSGKGTQCDKIVAK-YGFTHLSTGDLLRAEVKSGSERAK 239 IV+++GGPGSGK T+ K++A+ G TH+S G LL+ E ++RA+ Sbjct: 340 IVFIVGGPGSGK-TELAKLLAESSGRTHISMGQLLKEEATKDTDRAR 385 >SB_58530| Best HMM Match : No HMM Matches (HMM E-Value=.) Length = 288 Score = 80.6 bits (190), Expect = 7e-16 Identities = 49/139 (35%), Positives = 78/139 (56%), Gaps = 1/139 (0%) Frame = +3 Query: 102 IVWVLGGPGSGKGTQCDKIVAK-YGFTHLSTGDLLRAEVKSGSERAKCLTAIMERGELVP 278 +++V+GGPGSGK T+ K++A+ G TH+S G LL+ E ++RA+ + + G LV Sbjct: 106 VIFVIGGPGSGK-TELAKLLAESSGRTHISMGQLLKEEATKDTDRAREVARAIGMGTLVS 164 Query: 279 NEIVLDLLKEAILARAEESKGFLIDGYPREKSQGIAFEENIAPVSVIIYFEASSETLTQR 458 E L +L E I+ + G+++DGYPR Q F E ++ + ++ E S E + +R Sbjct: 165 PEHALGILSETIVRGEKNLGGYVVDGYPRSHEQAKNFTEKVSDFNRVVALECSDEEM-ER 223 Query: 459 LLGRAASSGRADDNEETIK 515 L A A NEE +K Sbjct: 224 L---AKEKLGAALNEEQLK 239 >SB_19245| Best HMM Match : ADK (HMM E-Value=0) Length = 188 Score = 79.0 bits (186), Expect = 2e-15 Identities = 47/129 (36%), Positives = 75/129 (58%), Gaps = 3/129 (2%) Frame = +3 Query: 111 VLGGPGSGKGTQCDKIVAKYGFTHLSTGDLLRAEVKSGSERAKCLTAIMERGELVPNEIV 290 ++G PGSGKGT ++IV +G HLS+G+LLR V++ ++ + A + +GELVP+E++ Sbjct: 36 IMGPPGSGKGTVSERIVRDFGVEHLSSGELLRHHVQNHTDLGEEAQAYILKGELVPDELM 95 Query: 291 LDLLKEAILARAEESKG-FLIDGYPREKSQGIAFEENIAPVSVIIYFEASSETLTQRLLG 467 +DL IL + KG +L+DG+PR Q E + V++ + T+ R+ Sbjct: 96 VDL----ILHELDAKKGNWLLDGFPRTVGQAETLSEK-HKIDVVVNMDVPFATIVDRIKQ 150 Query: 468 R--AASSGR 488 R A SGR Sbjct: 151 RWVHAVSGR 159 >SB_28550| Best HMM Match : Fer2_2 (HMM E-Value=2.49992e-42) Length = 1644 Score = 46.0 bits (104), Expect = 2e-05 Identities = 23/70 (32%), Positives = 40/70 (57%), Gaps = 3/70 (4%) Frame = +3 Query: 315 LARAEESKGFLIDGYPREKSQGIAFEENI---APVSVIIYFEASSETLTQRLLGRAASSG 485 +A+++ K FLIDG+PR + +E + V +++FE + R++ R SSG Sbjct: 2 MAKSDVQK-FLIDGFPRNEDNLQGWESRMNDKVDVKAVLFFECPEDICIGRIMSRGQSSG 60 Query: 486 RADDNEETIK 515 R DDN E+++ Sbjct: 61 RPDDNIESLR 70 >SB_33720| Best HMM Match : No HMM Matches (HMM E-Value=.) Length = 124 Score = 36.3 bits (80), Expect(2) = 2e-04 Identities = 21/72 (29%), Positives = 41/72 (56%), Gaps = 5/72 (6%) Frame = +3 Query: 267 ELVPNEIVLDLLKEAILARAEESKGFLIDGYPR-----EKSQGIAFEENIAPVSVIIYFE 431 +LV +++V++L+ + L + E G+L+DG+PR EK G+ E+ A + ++ F Sbjct: 54 QLVSDDLVVELIDDN-LTKPECQNGWLLDGFPRTVAQAEKLDGL-LEKRNAQLDAVVEFN 111 Query: 432 ASSETLTQRLLG 467 + L +R+ G Sbjct: 112 IADSLLVKRITG 123 Score = 25.4 bits (53), Expect(2) = 2e-04 Identities = 10/12 (83%), Positives = 11/12 (91%) Frame = +3 Query: 111 VLGGPGSGKGTQ 146 +LG PGSGKGTQ Sbjct: 43 LLGPPGSGKGTQ 54 >SB_31065| Best HMM Match : ADK (HMM E-Value=1.5e-31) Length = 166 Score = 39.5 bits (88), Expect = 0.002 Identities = 27/85 (31%), Positives = 46/85 (54%), Gaps = 7/85 (8%) Frame = +3 Query: 270 LVPNEIVLDLLKEAILARAEESKGFLIDGYPR-----EKSQGIAFEENIAPVSVIIYFEA 434 LV +++V++L+ + L + E G+L+DG+PR EK G+ E+ A + ++ F Sbjct: 1 LVSDDLVVELIDDN-LTKPECQNGWLLDGFPRTVAQAEKLDGL-LEKRNAQLDAVVEFNI 58 Query: 435 SSETLTQRLLGRA--ASSGRADDNE 503 + L +R+ GR SSGR E Sbjct: 59 ADSLLVKRITGRLLHKSSGRTYHTE 83 >SB_379| Best HMM Match : ADK (HMM E-Value=3.2e-05) Length = 991 Score = 35.1 bits (77), Expect = 0.035 Identities = 14/37 (37%), Positives = 23/37 (62%) Frame = +3 Query: 252 IMERGELVPNEIVLDLLKEAILARAEESKGFLIDGYP 362 I+ RGE +P E+V LL E + + G+++DG+P Sbjct: 16 ILLRGEAIPEELVTKLLIEKVYSPETAHHGYILDGFP 52 >SB_4186| Best HMM Match : ADK (HMM E-Value=0.094) Length = 1053 Score = 34.3 bits (75), Expect = 0.060 Identities = 15/40 (37%), Positives = 24/40 (60%) Frame = +3 Query: 102 IVWVLGGPGSGKGTQCDKIVAKYGFTHLSTGDLLRAEVKS 221 +V + GGPGS KG+ + +V +GF +S DL+ + S Sbjct: 663 VVIMFGGPGSTKGSIINDLVKMFGFVFISAEDLILKNLPS 702 >SB_43624| Best HMM Match : No HMM Matches (HMM E-Value=.) Length = 1018 Score = 31.1 bits (67), Expect = 0.56 Identities = 21/59 (35%), Positives = 32/59 (54%), Gaps = 3/59 (5%) Frame = +3 Query: 90 SKKPIVWVLGGPGSGKGTQCDKIVAKYGFTHLSTGDL--LRAEVKSGS-ERAKCLTAIM 257 SK P V+ PGSG GT D+ V K + S+GD + A +K + + K LT+++ Sbjct: 343 SKPPPTGVMPTPGSGPGTSFDQCVFKTDLSKGSSGDTFEMSAFIKEETVQIGKALTSLV 401 >SB_16493| Best HMM Match : NACHT (HMM E-Value=1.1e-08) Length = 833 Score = 30.3 bits (65), Expect = 0.98 Identities = 12/22 (54%), Positives = 16/22 (72%) Frame = +3 Query: 105 VWVLGGPGSGKGTQCDKIVAKY 170 V V GGPGSGK T C ++V ++ Sbjct: 59 VLVEGGPGSGKTTMCQRLVQEW 80 >SB_43601| Best HMM Match : ADK (HMM E-Value=2.3e-05) Length = 712 Score = 29.5 bits (63), Expect = 1.7 Identities = 12/38 (31%), Positives = 24/38 (63%) Frame = +3 Query: 273 VPNEIVLDLLKEAILARAEESKGFLIDGYPREKSQGIA 386 VP+++VL LL + + +KG+++ G+P+ + Q A Sbjct: 325 VPDDLVLQLLHQRMSRLDAVTKGWVLHGFPKTREQAEA 362 >SB_18188| Best HMM Match : SRP54 (HMM E-Value=0) Length = 410 Score = 29.1 bits (62), Expect = 2.3 Identities = 29/106 (27%), Positives = 46/106 (43%), Gaps = 5/106 (4%) Frame = +3 Query: 93 KKPIVWVLGGPGSGKGTQCDKIVAKY---GF-THLSTGDLLRAEVKSGSERAKCLTAIME 260 KK ++ +G GSGK T C K+ Y G+ T L D RA ++ I Sbjct: 15 KKNVIMFVGLQGSGKTTTCSKLAYYYQRKGWKTCLICADTFRAGAFDQLKQNATKARIPF 74 Query: 261 RGELVPNEIVLDLLKEAILARAEES-KGFLIDGYPREKSQGIAFEE 395 G + V+ + +E + EE+ + ++D R K + FEE Sbjct: 75 YGSYTETDPVI-IAQEGVEKFKEENFEIIIVDTSGRHKQEESLFEE 119 >SB_36947| Best HMM Match : No HMM Matches (HMM E-Value=.) Length = 96 Score = 29.1 bits (62), Expect = 2.3 Identities = 13/41 (31%), Positives = 23/41 (56%) Frame = +1 Query: 112 SWEVPDQEREHNATRSSPNTGSLTSRLETCSGLKSKAARRG 234 +WE D E +++A R++ +T ++ET LK+ RG Sbjct: 52 AWETRDLEHDNSAERTTTHTLRTADKIETLISLKAVKHDRG 92 >SB_35426| Best HMM Match : No HMM Matches (HMM E-Value=.) Length = 533 Score = 29.1 bits (62), Expect = 2.3 Identities = 18/57 (31%), Positives = 26/57 (45%), Gaps = 1/57 (1%) Frame = +1 Query: 184 SRLETCSGLKSKAARRGRNALPLLWKEASLSLMKSSWIC*KKRSW-PVLKNPKASSS 351 ++L S A GR WK SLS+ K WI R ++KNP++ S+ Sbjct: 221 AKLTASSSQSGFPASSGRLLGASAWKPVSLSIDKEPWIMTGNRDQNTIIKNPQSMSA 277 >SB_12814| Best HMM Match : IncA (HMM E-Value=1.7) Length = 226 Score = 27.9 bits (59), Expect = 5.3 Identities = 11/36 (30%), Positives = 17/36 (47%) Frame = -3 Query: 133 PDPGPPRTHTIGFFDVSMGAIVYKIKIDVVCDNLVI 26 P PP+THT S+G V ++ +CD + Sbjct: 16 PSVCPPQTHTTPTAPASIGGDVQSFRLQKICDTQAV 51 >SB_2656| Best HMM Match : IncA (HMM E-Value=1.7) Length = 226 Score = 27.9 bits (59), Expect = 5.3 Identities = 11/36 (30%), Positives = 17/36 (47%) Frame = -3 Query: 133 PDPGPPRTHTIGFFDVSMGAIVYKIKIDVVCDNLVI 26 P PP+THT S+G V ++ +CD + Sbjct: 16 PSVCPPQTHTTPTAPASIGGDVQSFRLQKICDTQAV 51 >SB_57096| Best HMM Match : No HMM Matches (HMM E-Value=.) Length = 442 Score = 27.5 bits (58), Expect = 6.9 Identities = 22/57 (38%), Positives = 26/57 (45%), Gaps = 2/57 (3%) Frame = +2 Query: 221 RLGEGEMPYRYYGKRRACP**NRPGSAKRSDPGPC*RI--QRLPHRRLPSREVTGYR 385 RL G +P R RR P P S P R+ +RLP RRLPSR + R Sbjct: 32 RLPSGRLPSRRLPSRRL-PSGRLPSRRLPSGRLPSGRLPSRRLPSRRLPSRRLPSRR 87 Score = 27.5 bits (58), Expect = 6.9 Identities = 22/70 (31%), Positives = 28/70 (40%), Gaps = 2/70 (2%) Frame = +2 Query: 182 PLDWRPAQG*SQKRLGEGEMPYRYYGKRRACP**NRPGS--AKRSDPGPC*RIQRLPHRR 355 P W P++ +RL G +P R R P P R P C +RLP R Sbjct: 206 PSGWLPSRRLPSRRLPSGRLPSRRLPSGRL-PSGRLPSRWLPSRRLPSGCLPSRRLPSGR 264 Query: 356 LPSREVTGYR 385 LPS + R Sbjct: 265 LPSGRLPSRR 274 >SB_18559| Best HMM Match : No HMM Matches (HMM E-Value=.) Length = 59 Score = 27.5 bits (58), Expect = 6.9 Identities = 12/21 (57%), Positives = 13/21 (61%) Frame = -3 Query: 163 ATILSHCVPFPDPGPPRTHTI 101 A I S VP+ D GPPR TI Sbjct: 6 ALIQSDVVPYEDKGPPRPETI 26 >SB_29339| Best HMM Match : No HMM Matches (HMM E-Value=.) Length = 1048 Score = 27.5 bits (58), Expect = 6.9 Identities = 11/35 (31%), Positives = 17/35 (48%) Frame = -3 Query: 130 DPGPPRTHTIGFFDVSMGAIVYKIKIDVVCDNLVI 26 D PP+THT S+G V ++ +CD + Sbjct: 185 DVCPPQTHTTPTAPASIGGDVQSFRLQKICDTQAV 219 >SB_40225| Best HMM Match : No HMM Matches (HMM E-Value=.) Length = 1442 Score = 27.1 bits (57), Expect = 9.2 Identities = 14/42 (33%), Positives = 23/42 (54%) Frame = +3 Query: 276 PNEIVLDLLKEAILARAEESKGFLIDGYPREKSQGIAFEENI 401 P VLD+ +E + A E + D PR++ +G FE++I Sbjct: 1361 PRRRVLDIEEEPLRIAANEPQP-AADPLPRDRPRGFVFEDDI 1401 >SB_21353| Best HMM Match : No HMM Matches (HMM E-Value=.) Length = 724 Score = 27.1 bits (57), Expect = 9.2 Identities = 10/32 (31%), Positives = 16/32 (50%) Frame = -3 Query: 121 PPRTHTIGFFDVSMGAIVYKIKIDVVCDNLVI 26 PP+THT S+G V ++ +CD + Sbjct: 518 PPQTHTTPTAPASIGGDVQSFRLQKICDTQAV 549 >SB_26671| Best HMM Match : zf-TRAF (HMM E-Value=0.54) Length = 901 Score = 27.1 bits (57), Expect = 9.2 Identities = 14/44 (31%), Positives = 23/44 (52%), Gaps = 3/44 (6%) Frame = -3 Query: 499 LSSARPELAARPSRRCVSVS---EEASKYIITETGAMFSSKAIP 377 LSS +P+ + P + CV S ++ + +T+ GA F K P Sbjct: 423 LSSTKPDSSGIPPKNCVDESGSDDDLMRPALTQAGAKFMVKTEP 466 Database: nematostella Posted date: Oct 22, 2007 1:22 PM Number of letters in database: 16,821,457 Number of sequences in database: 59,808 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.279 0.0580 0.190 Matrix: BLOSUM62 Gap Penalties: Existence: 9, Extension: 2 Number of Hits to DB: 15,320,042 Number of Sequences: 59808 Number of extensions: 334491 Number of successful extensions: 1000 Number of sequences better than 10.0: 23 Number of HSP's better than 10.0 without gapping: 931 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 990 length of database: 16,821,457 effective HSP length: 77 effective length of database: 12,216,241 effective search space used: 1148326654 frameshift window, decay const: 40, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 37 (14.9 bits) X3: 62 (25.0 bits) S1: 41 (21.7 bits)
- SilkBase 1999-2023 -