Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= epV30417
(516 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
X74874-1|CAA52862.1| 1970|Homo sapiens RNA polymerase II largest... 34 0.26
X63564-1|CAA45125.1| 1970|Homo sapiens RNA polymerase II largest... 34 0.26
Y00839-2|CAA68764.1| 749|Homo sapiens 70 kD alpha-glucosidase p... 33 0.59
Y00839-1|CAA68763.1| 952|Homo sapiens glucan 1, 4-alpha-glucosi... 33 0.59
X55080-1|CAC12967.1| 952|Homo sapiens acid alpha-glucosidase pr... 33 0.59
M34424-1|AAA52506.1| 952|Homo sapiens GAA protein. 33 0.59
DQ907243-1|ABI53718.1| 952|Homo sapiens alpha-glucosidase protein. 33 0.59
BC040431-1|AAH40431.1| 952|Homo sapiens glucosidase, alpha; aci... 33 0.59
L19606-1|AAA03539.1| 450|Homo sapiens paired box homeotic prote... 31 1.8
BC001060-1|AAH01060.1| 450|Homo sapiens paired box gene 8 protein. 31 1.8
AC016683-2|AAX88880.1| 450|Homo sapiens unknown protein. 31 1.8
BC047411-1|AAH47411.1| 592|Homo sapiens tubulin tyrosine ligase... 31 3.2
BC031288-1|AAH31288.1| 265|Homo sapiens similar to hypothetical... 31 3.2
BC030650-1|AAH30650.1| 592|Homo sapiens TTLL2 protein protein. 31 3.2
AY026506-1|AAK20169.1| 592|Homo sapiens testis specific protein... 31 3.2
AL021331-3|CAD92564.1| 592|Homo sapiens RP3-366N23.3 protein. 31 3.2
BC036099-1|AAH36099.1| 716|Homo sapiens ARNT2 protein protein. 30 4.2
AF185610-1|AAG15310.1| 706|Homo sapiens aryl-hydrocarbon recept... 30 4.2
AB002305-1|BAA20766.2| 716|Homo sapiens KIAA0307 protein. 30 4.2
BC060860-1|AAH60860.2| 518|Homo sapiens family with sequence si... 29 7.3
AK074867-1|BAC11255.1| 519|Homo sapiens protein ( Homo sapiens ... 29 7.3
Z95116-3|CAI17988.1| 423|Homo sapiens protein ( Human DNA seque... 29 9.7
CR456407-1|CAG30293.1| 443|Homo sapiens bK984G1.1 protein. 29 9.7
BC046358-1|AAH46358.1| 443|Homo sapiens EMI domain containing 1... 29 9.7
AL031186-3|CAI18002.1| 423|Homo sapiens protein ( Human DNA seq... 29 9.7
AJ416090-1|CAC94777.1| 441|Homo sapiens putative emu1 protein p... 29 9.7
>X74874-1|CAA52862.1| 1970|Homo sapiens RNA polymerase II largest
subunit protein.
Length = 1970
Score = 34.3 bits (75), Expect = 0.26
Identities = 22/54 (40%), Positives = 26/54 (48%), Gaps = 3/54 (5%)
Frame = +1
Query: 322 PRNLGGNPPAVPVVA--QGSFSWTSPEGVPISVNYVADENGYQPTGNAI-PTSP 474
PR+ GG P P + S+S TSP P S NY Y PT + PTSP
Sbjct: 1602 PRSPGGYTPQSPSYSPTSPSYSPTSPSYSPTSPNYSPTSPSYSPTSPSYSPTSP 1655
Score = 29.9 bits (64), Expect = 5.5
Identities = 16/35 (45%), Positives = 18/35 (51%), Gaps = 1/35 (2%)
Frame = +1
Query: 373 SFSWTSPEGVPISVNYVADENGYQPTGNAI-PTSP 474
S+S TSP P S NY Y PT + PTSP
Sbjct: 1740 SYSPTSPNYSPTSPNYTPTSPSYSPTSPSYSPTSP 1774
Score = 29.9 bits (64), Expect = 5.5
Identities = 16/35 (45%), Positives = 18/35 (51%), Gaps = 1/35 (2%)
Frame = +1
Query: 373 SFSWTSPEGVPISVNYVADENGYQPTGNAI-PTSP 474
S+S TSP P S NY Y PT + PTSP
Sbjct: 1761 SYSPTSPSYSPTSPNYTPTSPNYSPTSPSYSPTSP 1795
Score = 29.9 bits (64), Expect = 5.5
Identities = 16/35 (45%), Positives = 18/35 (51%), Gaps = 1/35 (2%)
Frame = +1
Query: 373 SFSWTSPEGVPISVNYVADENGYQPTGNAI-PTSP 474
S+S TSP P S NY Y PT + PTSP
Sbjct: 1768 SYSPTSPNYTPTSPNYSPTSPSYSPTSPSYSPTSP 1802
Score = 29.1 bits (62), Expect = 9.7
Identities = 16/35 (45%), Positives = 18/35 (51%), Gaps = 1/35 (2%)
Frame = +1
Query: 373 SFSWTSPEGVPISVNYVADENGYQPTG-NAIPTSP 474
S+S TSP P S +Y Y PT N PTSP
Sbjct: 1726 SYSPTSPSYSPTSPSYSPTSPNYSPTSPNYTPTSP 1760
>X63564-1|CAA45125.1| 1970|Homo sapiens RNA polymerase II largest
subunit protein.
Length = 1970
Score = 34.3 bits (75), Expect = 0.26
Identities = 22/54 (40%), Positives = 26/54 (48%), Gaps = 3/54 (5%)
Frame = +1
Query: 322 PRNLGGNPPAVPVVA--QGSFSWTSPEGVPISVNYVADENGYQPTGNAI-PTSP 474
PR+ GG P P + S+S TSP P S NY Y PT + PTSP
Sbjct: 1602 PRSPGGYTPQSPSYSPTSPSYSPTSPSYSPTSPNYSPTSPSYSPTSPSYSPTSP 1655
Score = 29.9 bits (64), Expect = 5.5
Identities = 16/35 (45%), Positives = 18/35 (51%), Gaps = 1/35 (2%)
Frame = +1
Query: 373 SFSWTSPEGVPISVNYVADENGYQPTGNAI-PTSP 474
S+S TSP P S NY Y PT + PTSP
Sbjct: 1740 SYSPTSPNYSPTSPNYTPTSPSYSPTSPSYSPTSP 1774
Score = 29.9 bits (64), Expect = 5.5
Identities = 16/35 (45%), Positives = 18/35 (51%), Gaps = 1/35 (2%)
Frame = +1
Query: 373 SFSWTSPEGVPISVNYVADENGYQPTGNAI-PTSP 474
S+S TSP P S NY Y PT + PTSP
Sbjct: 1761 SYSPTSPSYSPTSPNYTPTSPNYSPTSPSYSPTSP 1795
Score = 29.9 bits (64), Expect = 5.5
Identities = 16/35 (45%), Positives = 18/35 (51%), Gaps = 1/35 (2%)
Frame = +1
Query: 373 SFSWTSPEGVPISVNYVADENGYQPTGNAI-PTSP 474
S+S TSP P S NY Y PT + PTSP
Sbjct: 1768 SYSPTSPNYTPTSPNYSPTSPSYSPTSPSYSPTSP 1802
Score = 29.1 bits (62), Expect = 9.7
Identities = 16/35 (45%), Positives = 18/35 (51%), Gaps = 1/35 (2%)
Frame = +1
Query: 373 SFSWTSPEGVPISVNYVADENGYQPTG-NAIPTSP 474
S+S TSP P S +Y Y PT N PTSP
Sbjct: 1726 SYSPTSPSYSPTSPSYSPTSPNYSPTSPNYTPTSP 1760
>Y00839-2|CAA68764.1| 749|Homo sapiens 70 kD alpha-glucosidase
protein.
Length = 749
Score = 33.1 bits (72), Expect = 0.59
Identities = 17/47 (36%), Positives = 24/47 (51%)
Frame = +1
Query: 235 KFGNEINPDGSYTYFYETNNGIAAQEQGVPRNLGGNPPAVPVVAQGS 375
+F +++ DG + E +N I E G P N NPP VP V G+
Sbjct: 302 EFHDQVPFDGMWIDMNEPSNFIRGSEDGCPNNELENPPYVPGVVGGT 348
>Y00839-1|CAA68763.1| 952|Homo sapiens glucan 1,
4-alpha-glucosidase protein.
Length = 952
Score = 33.1 bits (72), Expect = 0.59
Identities = 17/47 (36%), Positives = 24/47 (51%)
Frame = +1
Query: 235 KFGNEINPDGSYTYFYETNNGIAAQEQGVPRNLGGNPPAVPVVAQGS 375
+F +++ DG + E +N I E G P N NPP VP V G+
Sbjct: 505 EFHDQVPFDGMWIDMNEPSNFIRGSEDGCPNNELENPPYVPGVVGGT 551
>X55080-1|CAC12967.1| 952|Homo sapiens acid alpha-glucosidase
protein.
Length = 952
Score = 33.1 bits (72), Expect = 0.59
Identities = 17/47 (36%), Positives = 24/47 (51%)
Frame = +1
Query: 235 KFGNEINPDGSYTYFYETNNGIAAQEQGVPRNLGGNPPAVPVVAQGS 375
+F +++ DG + E +N I E G P N NPP VP V G+
Sbjct: 505 EFHDQVPFDGMWIDMNEPSNFIRGSEDGCPNNELENPPYVPGVVGGT 551
>M34424-1|AAA52506.1| 952|Homo sapiens GAA protein.
Length = 952
Score = 33.1 bits (72), Expect = 0.59
Identities = 17/47 (36%), Positives = 24/47 (51%)
Frame = +1
Query: 235 KFGNEINPDGSYTYFYETNNGIAAQEQGVPRNLGGNPPAVPVVAQGS 375
+F +++ DG + E +N I E G P N NPP VP V G+
Sbjct: 505 EFHDQVPFDGMWIDMNEPSNFIRGSEDGCPNNELENPPYVPGVVGGT 551
>DQ907243-1|ABI53718.1| 952|Homo sapiens alpha-glucosidase protein.
Length = 952
Score = 33.1 bits (72), Expect = 0.59
Identities = 17/47 (36%), Positives = 24/47 (51%)
Frame = +1
Query: 235 KFGNEINPDGSYTYFYETNNGIAAQEQGVPRNLGGNPPAVPVVAQGS 375
+F +++ DG + E +N I E G P N NPP VP V G+
Sbjct: 505 EFHDQVPFDGMWIDMNEPSNFIRGSEDGCPNNELENPPYVPGVVGGT 551
>BC040431-1|AAH40431.1| 952|Homo sapiens glucosidase, alpha; acid
(Pompe disease, glycogen storage disease type II)
protein.
Length = 952
Score = 33.1 bits (72), Expect = 0.59
Identities = 17/47 (36%), Positives = 24/47 (51%)
Frame = +1
Query: 235 KFGNEINPDGSYTYFYETNNGIAAQEQGVPRNLGGNPPAVPVVAQGS 375
+F +++ DG + E +N I E G P N NPP VP V G+
Sbjct: 505 EFHDQVPFDGMWIDMNEPSNFIRGSEDGCPNNELENPPYVPGVVGGT 551
>L19606-1|AAA03539.1| 450|Homo sapiens paired box homeotic protein
protein.
Length = 450
Score = 31.5 bits (68), Expect = 1.8
Identities = 16/64 (25%), Positives = 28/64 (43%)
Frame = +1
Query: 256 PDGSYTYFYETNNGIAAQEQGVPRNLGGNPPAVPVVAQGSFSWTSPEGVPISVNYVADEN 435
P + Y T + + + V L G PP +P QGS++ ++ G+ Y +
Sbjct: 346 PHAASVYGQFTGQALLSGREMVGPTLPGYPPHIPTSGQGSYASSAIAGMVAGSEYSGNAY 405
Query: 436 GYQP 447
G+ P
Sbjct: 406 GHTP 409
>BC001060-1|AAH01060.1| 450|Homo sapiens paired box gene 8 protein.
Length = 450
Score = 31.5 bits (68), Expect = 1.8
Identities = 16/64 (25%), Positives = 28/64 (43%)
Frame = +1
Query: 256 PDGSYTYFYETNNGIAAQEQGVPRNLGGNPPAVPVVAQGSFSWTSPEGVPISVNYVADEN 435
P + Y T + + + V L G PP +P QGS++ ++ G+ Y +
Sbjct: 346 PHAASVYGQFTGQALLSGREMVGPTLPGYPPHIPTSGQGSYASSAIAGMVAGSEYSGNAY 405
Query: 436 GYQP 447
G+ P
Sbjct: 406 GHTP 409
>AC016683-2|AAX88880.1| 450|Homo sapiens unknown protein.
Length = 450
Score = 31.5 bits (68), Expect = 1.8
Identities = 16/64 (25%), Positives = 28/64 (43%)
Frame = +1
Query: 256 PDGSYTYFYETNNGIAAQEQGVPRNLGGNPPAVPVVAQGSFSWTSPEGVPISVNYVADEN 435
P + Y T + + + V L G PP +P QGS++ ++ G+ Y +
Sbjct: 346 PHAASVYGQFTGQALLSGREMVGPTLPGYPPHIPTSGQGSYASSAIAGMVAGSEYSGNAY 405
Query: 436 GYQP 447
G+ P
Sbjct: 406 GHTP 409
>BC047411-1|AAH47411.1| 592|Homo sapiens tubulin tyrosine
ligase-like family, member 2 protein.
Length = 592
Score = 30.7 bits (66), Expect = 3.2
Identities = 15/48 (31%), Positives = 24/48 (50%)
Frame = +2
Query: 314 REFHVTLVETPLLFPSLHRAHSPGHLLKVFPSASITSPTRTDTSPLVM 457
++FH++ E P P L H+P L + S + +T TSP V+
Sbjct: 495 QDFHLSTREMPQSKPKLRSRHTPHKTLMPYASLFQSHSCKTKTSPCVL 542
>BC031288-1|AAH31288.1| 265|Homo sapiens similar to hypothetical
protein MGC49416 protein.
Length = 265
Score = 30.7 bits (66), Expect = 3.2
Identities = 18/54 (33%), Positives = 25/54 (46%)
Frame = +1
Query: 211 EGYGAETVKFGNEINPDGSYTYFYETNNGIAAQEQGVPRNLGGNPPAVPVVAQG 372
+GY AE G+ + DGS T G A+ + PR GG A+ A+G
Sbjct: 26 QGY-AEPEGVGDAVRADGSVTLVLPQTRGPASSHRESPRGSGGAEAALEEAARG 78
>BC030650-1|AAH30650.1| 592|Homo sapiens TTLL2 protein protein.
Length = 592
Score = 30.7 bits (66), Expect = 3.2
Identities = 15/48 (31%), Positives = 24/48 (50%)
Frame = +2
Query: 314 REFHVTLVETPLLFPSLHRAHSPGHLLKVFPSASITSPTRTDTSPLVM 457
++FH++ E P P L H+P L + S + +T TSP V+
Sbjct: 495 QDFHLSTREMPQSKPKLRSRHTPHKTLMPYASLFQSHSCKTKTSPCVL 542
>AY026506-1|AAK20169.1| 592|Homo sapiens testis specific protein
NYD-TSPG protein.
Length = 592
Score = 30.7 bits (66), Expect = 3.2
Identities = 15/48 (31%), Positives = 24/48 (50%)
Frame = +2
Query: 314 REFHVTLVETPLLFPSLHRAHSPGHLLKVFPSASITSPTRTDTSPLVM 457
++FH++ E P P L H+P L + S + +T TSP V+
Sbjct: 495 QDFHLSTREMPQSKPKLRSRHTPHKTLMPYASLFQSHSCKTKTSPCVL 542
>AL021331-3|CAD92564.1| 592|Homo sapiens RP3-366N23.3 protein.
Length = 592
Score = 30.7 bits (66), Expect = 3.2
Identities = 15/48 (31%), Positives = 24/48 (50%)
Frame = +2
Query: 314 REFHVTLVETPLLFPSLHRAHSPGHLLKVFPSASITSPTRTDTSPLVM 457
++FH++ E P P L H+P L + S + +T TSP V+
Sbjct: 495 QDFHLSTREMPQSKPKLRSRHTPHKTLMPYASLFQSHSCKTKTSPCVL 542
>BC036099-1|AAH36099.1| 716|Homo sapiens ARNT2 protein protein.
Length = 716
Score = 30.3 bits (65), Expect = 4.2
Identities = 14/43 (32%), Positives = 22/43 (51%)
Frame = +1
Query: 346 PAVPVVAQGSFSWTSPEGVPISVNYVADENGYQPTGNAIPTSP 474
P + +Q S + +SP G+ S Y AD + Y P + +SP
Sbjct: 582 PGQQIPSQSSKTQSSPFGIGTSHTYPADPSSYSPLSSPATSSP 624
>AF185610-1|AAG15310.1| 706|Homo sapiens aryl-hydrocarbon receptor
nuclear translocator 2 protein.
Length = 706
Score = 30.3 bits (65), Expect = 4.2
Identities = 14/43 (32%), Positives = 22/43 (51%)
Frame = +1
Query: 346 PAVPVVAQGSFSWTSPEGVPISVNYVADENGYQPTGNAIPTSP 474
P + +Q S + +SP G+ S Y AD + Y P + +SP
Sbjct: 571 PGQQIPSQSSKTQSSPFGIGTSHTYPADPSSYSPLSSPATSSP 613
>AB002305-1|BAA20766.2| 716|Homo sapiens KIAA0307 protein.
Length = 716
Score = 30.3 bits (65), Expect = 4.2
Identities = 14/43 (32%), Positives = 22/43 (51%)
Frame = +1
Query: 346 PAVPVVAQGSFSWTSPEGVPISVNYVADENGYQPTGNAIPTSP 474
P + +Q S + +SP G+ S Y AD + Y P + +SP
Sbjct: 581 PGQQIPSQSSKTQSSPFGIGTSHTYPADPSSYSPLSSPATSSP 623
>BC060860-1|AAH60860.2| 518|Homo sapiens family with sequence
similarity 98, member A protein.
Length = 518
Score = 29.5 bits (63), Expect = 7.3
Identities = 11/21 (52%), Positives = 13/21 (61%)
Frame = -1
Query: 195 YSDGGNRGDRDGQKRSRSGHG 133
Y DGG+ GDR G + R G G
Sbjct: 448 YQDGGHHGDRGGGRGGRGGRG 468
>AK074867-1|BAC11255.1| 519|Homo sapiens protein ( Homo sapiens
cDNA FLJ90386 fis, clone NT2RP2005378, weakly similar to
GLYCINE-RICH CELL WALL STRUCTURAL PROTEIN 1.8 PRECURSOR.
).
Length = 519
Score = 29.5 bits (63), Expect = 7.3
Identities = 11/21 (52%), Positives = 13/21 (61%)
Frame = -1
Query: 195 YSDGGNRGDRDGQKRSRSGHG 133
Y DGG+ GDR G + R G G
Sbjct: 449 YQDGGHHGDRGGGRGGRGGRG 469
>Z95116-3|CAI17988.1| 423|Homo sapiens protein ( Human DNA sequence
from clone CTA-57G9 on chromosome 22q12.1. ).
Length = 423
Score = 29.1 bits (62), Expect = 9.7
Identities = 18/59 (30%), Positives = 23/59 (38%), Gaps = 1/59 (1%)
Frame = +1
Query: 310 EQGVPRNLGG-NPPAVPVVAQGSFSWTSPEGVPISVNYVADENGYQPTGNAIPTSPPVP 483
E+G P G PP P + S G P+ N + N + P G P PP P
Sbjct: 225 ERGPPGPPGPPGPPGPPAPVGPPHARISQHGDPLLSNTFTETNNHWPQGPTGPPGPPGP 283
>CR456407-1|CAG30293.1| 443|Homo sapiens bK984G1.1 protein.
Length = 443
Score = 29.1 bits (62), Expect = 9.7
Identities = 18/59 (30%), Positives = 23/59 (38%), Gaps = 1/59 (1%)
Frame = +1
Query: 310 EQGVPRNLGG-NPPAVPVVAQGSFSWTSPEGVPISVNYVADENGYQPTGNAIPTSPPVP 483
E+G P G PP P + S G P+ N + N + P G P PP P
Sbjct: 245 ERGPPGPPGPPGPPGPPAPVGPPHARISQHGDPLLSNTFTETNNHWPQGPTGPPGPPGP 303
>BC046358-1|AAH46358.1| 443|Homo sapiens EMI domain containing 1
protein.
Length = 443
Score = 29.1 bits (62), Expect = 9.7
Identities = 18/59 (30%), Positives = 23/59 (38%), Gaps = 1/59 (1%)
Frame = +1
Query: 310 EQGVPRNLGG-NPPAVPVVAQGSFSWTSPEGVPISVNYVADENGYQPTGNAIPTSPPVP 483
E+G P G PP P + S G P+ N + N + P G P PP P
Sbjct: 245 ERGPPGPPGPPGPPGPPAPVGPPHARISQHGDPLLSNTFTETNNHWPQGPTGPPGPPGP 303
>AL031186-3|CAI18002.1| 423|Homo sapiens protein ( Human DNA
sequence from clone CTA-984G1 on chromosome
22q12.1-12.2. ).
Length = 423
Score = 29.1 bits (62), Expect = 9.7
Identities = 18/59 (30%), Positives = 23/59 (38%), Gaps = 1/59 (1%)
Frame = +1
Query: 310 EQGVPRNLGG-NPPAVPVVAQGSFSWTSPEGVPISVNYVADENGYQPTGNAIPTSPPVP 483
E+G P G PP P + S G P+ N + N + P G P PP P
Sbjct: 225 ERGPPGPPGPPGPPGPPAPVGPPHARISQHGDPLLSNTFTETNNHWPQGPTGPPGPPGP 283
>AJ416090-1|CAC94777.1| 441|Homo sapiens putative emu1 protein
protein.
Length = 441
Score = 29.1 bits (62), Expect = 9.7
Identities = 18/59 (30%), Positives = 23/59 (38%), Gaps = 1/59 (1%)
Frame = +1
Query: 310 EQGVPRNLGG-NPPAVPVVAQGSFSWTSPEGVPISVNYVADENGYQPTGNAIPTSPPVP 483
E+G P G PP P + S G P+ N + N + P G P PP P
Sbjct: 243 ERGPPGPPGPPGPPGPPAPVGPPHARISQHGDPLLSNTFTETNNHWPQGPTGPPGPPGP 301
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.316 0.136 0.413
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 81,083,385
Number of Sequences: 237096
Number of extensions: 2012847
Number of successful extensions: 11796
Number of sequences better than 10.0: 26
Number of HSP's better than 10.0 without gapping: 11234
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 11747
length of database: 76,859,062
effective HSP length: 85
effective length of database: 56,705,902
effective search space used: 4876707572
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.6 bits)
- SilkBase 1999-2023 -