Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= epV30413
(516 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_51093| Best HMM Match : No HMM Matches (HMM E-Value=.) 34 0.080
SB_46179| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 0.98
SB_39072| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 1.7
SB_28078| Best HMM Match : SGS (HMM E-Value=1.5) 29 2.3
SB_18540| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 2.3
SB_50240| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 3.0
SB_27891| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 3.0
SB_11738| Best HMM Match : SH3_2 (HMM E-Value=3.7e-32) 28 4.0
SB_18179| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 5.3
SB_5839| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 5.3
SB_39796| Best HMM Match : VWA (HMM E-Value=0) 28 5.3
SB_34586| Best HMM Match : Drf_FH1 (HMM E-Value=0.088) 28 5.3
SB_23337| Best HMM Match : Ank (HMM E-Value=5.1e-07) 28 5.3
SB_33346| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 6.9
SB_22964| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 6.9
SB_20837| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 6.9
SB_46725| Best HMM Match : Extensin_2 (HMM E-Value=1.9) 27 6.9
SB_31811| Best HMM Match : Keratin_B2 (HMM E-Value=0.029) 27 6.9
SB_12439| Best HMM Match : Transthyretin (HMM E-Value=7.7) 27 9.2
SB_40486| Best HMM Match : C2 (HMM E-Value=2.9e-05) 27 9.2
SB_33568| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 9.2
SB_32754| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 9.2
SB_24809| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 9.2
>SB_51093| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 253
Score = 33.9 bits (74), Expect = 0.080
Identities = 31/101 (30%), Positives = 41/101 (40%)
Frame = +2
Query: 194 TSEPRKGTGQHAAAFFPNSCRPTLTPSRFTTTLSLPLRGLRYPATVTCLSIARSTATPRA 373
TS P T ++ P++ P + TTT S P + T S A ST+TPR
Sbjct: 50 TSAPSTSTTSNSTTRAPSTSTPR---AGSTTTTSAPSTSTPRTGSTTTTS-APSTSTPRT 105
Query: 374 LSMPTTTLALSIITGQSTTCQDACDVELIPSTPTRHGRTIS 496
S TT+ + T STT + ST T T S
Sbjct: 106 GSTTTTSAPSTSTTSNSTTRAPSTSTPRTGSTITLRTSTTS 146
Score = 31.1 bits (67), Expect = 0.56
Identities = 26/82 (31%), Positives = 34/82 (41%)
Frame = +2
Query: 254 RPTLTPSRFTTTLSLPLRGLRYPATVTCLSIARSTATPRALSMPTTTLALSIITGQSTTC 433
R T + TT+ S P + T S A ST+TPR S TT+ + T STT
Sbjct: 6 RSTPGTTSITTSTSTPSTSTPRAGSTTNTS-APSTSTPRTGSTTTTSAPSTSTTSNSTTR 64
Query: 434 QDACDVELIPSTPTRHGRTIST 499
+ ST T + ST
Sbjct: 65 APSTSTPRAGSTTTTSAPSTST 86
>SB_46179| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 4856
Score = 30.3 bits (65), Expect = 0.98
Identities = 16/48 (33%), Positives = 23/48 (47%)
Frame = +3
Query: 120 WQKRDAVEESQILAVLRAFSKRFGRHQSRGKVQANTPQRFSRTPVDLP 263
W+ RD+ +S I AVL KR ++ R K N ++FS P
Sbjct: 4708 WKSRDSDSDSSIDAVLDEMEKRRAGYEDRRKSFENLKRKFSEPSCTSP 4755
>SB_39072| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1011
Score = 29.5 bits (63), Expect = 1.7
Identities = 27/92 (29%), Positives = 44/92 (47%), Gaps = 1/92 (1%)
Frame = +2
Query: 242 PNSCRPTLTPSRFTTTLSLPLRGLRYPATVTCLSIARSTATPRALSMPTT-TLALSIITG 418
P++ +TPS +T S P P+T + S + +TP LSMP+T ++ + T
Sbjct: 174 PSAPGTPITPSTLSTP-STPST----PSTRSTPSTPSTPSTPSTLSMPSTPSMPNTPSTP 228
Query: 419 QSTTCQDACDVELIPSTPTRHGRTISTGWLPS 514
+ + + PSTP+ T ST +PS
Sbjct: 229 STPSTPSTLSTPITPSTPSTPS-TPSTPSMPS 259
Score = 29.5 bits (63), Expect = 1.7
Identities = 27/92 (29%), Positives = 44/92 (47%), Gaps = 1/92 (1%)
Frame = +2
Query: 242 PNSCRPTLTPSRFTTTLSLPLRGLRYPATVTCLSIARSTATPRALSMPTT-TLALSIITG 418
P++ +TPS +T S P P+T + S + +TP LSMP+T ++ + T
Sbjct: 724 PSAPGTPITPSTLSTP-STPST----PSTRSTPSTPSTPSTPSTLSMPSTPSMPNTPSTP 778
Query: 419 QSTTCQDACDVELIPSTPTRHGRTISTGWLPS 514
+ + + PSTP+ T ST +PS
Sbjct: 779 STPSTPSTLSTPITPSTPSTPS-TPSTPSMPS 809
>SB_28078| Best HMM Match : SGS (HMM E-Value=1.5)
Length = 934
Score = 29.1 bits (62), Expect = 2.3
Identities = 28/92 (30%), Positives = 45/92 (48%), Gaps = 3/92 (3%)
Frame = +2
Query: 245 NSCRPTLTPSRFTTTLSLPLRGLRYPATVTCLSIARSTATPRAL-SMPTTTLALSIITGQ 421
+SC T TPS TT SL L A+ L ++ ++ A+ S + L+L+I G
Sbjct: 204 SSCALTTTPSCALTTTSLHPGTLATFASSPSLPVSPLVSSHSAIPSRAKSPLSLTISDGD 263
Query: 422 S-TTCQDA-CDVELIPSTPTRHGRTISTGWLP 511
S +TC + ++ I S P++ + ST P
Sbjct: 264 SASTCSEVKSPIDKIRSMPSKSLSSESTTGSP 295
>SB_18540| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 286
Score = 29.1 bits (62), Expect = 2.3
Identities = 22/80 (27%), Positives = 32/80 (40%)
Frame = +2
Query: 260 TLTPSRFTTTLSLPLRGLRYPATVTCLSIARSTATPRALSMPTTTLALSIITGQSTTCQD 439
T T + +T T++ P P T + +T TP A TTT + T +TT
Sbjct: 97 TATITTYTATVTAPNATTTTPTATTTTTTTTTTTTPYA----TTTTPNTTTTTPNTTTTS 152
Query: 440 ACDVELIPSTPTRHGRTIST 499
P+T T T +T
Sbjct: 153 PNATTTTPNTTTTTPNTTTT 172
>SB_50240| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 302
Score = 28.7 bits (61), Expect = 3.0
Identities = 13/46 (28%), Positives = 23/46 (50%)
Frame = +3
Query: 132 DAVEESQILAVLRAFSKRFGRHQSRGKVQANTPQRFSRTPVDLPLL 269
D E+ + +R F++ +GR + V+ANT + P L +L
Sbjct: 147 DETEDRRRAETMREFTREYGRGVRQANVRANTKKLTGTLPYSLSML 192
>SB_27891| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 609
Score = 28.7 bits (61), Expect = 3.0
Identities = 15/47 (31%), Positives = 21/47 (44%)
Frame = +2
Query: 263 LTPSRFTTTLSLPLRGLRYPATVTCLSIARSTATPRALSMPTTTLAL 403
L P RF + L R R+P ++ S ST R S P + +L
Sbjct: 346 LNPKRFWSIFKLKSRDFRFPGIMSIGSAENSTQPARLASTPASIASL 392
>SB_11738| Best HMM Match : SH3_2 (HMM E-Value=3.7e-32)
Length = 2436
Score = 28.3 bits (60), Expect = 4.0
Identities = 25/103 (24%), Positives = 39/103 (37%), Gaps = 3/103 (2%)
Frame = +2
Query: 212 GTGQHAAAFFPNSC-RPTLTPSRFTTTLSLPLRGLRYPATVTCLS--IARSTATPRALSM 382
G +A F N + T+ P + TL G Y V + + TP +
Sbjct: 1536 GNSSYAHQIFVNGAPQRTIRPGTYQHTLMDLEPGQHYRVHVRARTSQFSLDENTPPSDDD 1595
Query: 383 PTTTLALSIITGQSTTCQDACDVELIPSTPTRHGRTISTGWLP 511
P T+ A+ T + DV L+PS P ++ W+P
Sbjct: 1596 PLTS-AVEFATEKGGLPDAPLDVTLLPSAPDNAPNSMEVAWMP 1637
>SB_18179| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 194
Score = 27.9 bits (59), Expect = 5.3
Identities = 18/70 (25%), Positives = 31/70 (44%)
Frame = +2
Query: 260 TLTPSRFTTTLSLPLRGLRYPATVTCLSIARSTATPRALSMPTTTLALSIITGQSTTCQD 439
T T + TTT + AT+T + +T T + TTT + T +TT ++
Sbjct: 6 TTTTTTTTTTTTTTTTTAATTATITTATATTTTTTTTTTTTTTTTTTTTTTTTTTTTTKN 65
Query: 440 ACDVELIPST 469
D + + +T
Sbjct: 66 NDDDDDVLAT 75
>SB_5839| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 778
Score = 27.9 bits (59), Expect = 5.3
Identities = 17/51 (33%), Positives = 24/51 (47%)
Frame = +2
Query: 323 ATVTCLSIARSTATPRALSMPTTTLALSIITGQSTTCQDACDVELIPSTPT 475
ATVT + A +TAT A + TT A + T +T A + +T T
Sbjct: 691 ATVTATATATATATATATAATTTATATATATVTATVTAAASATAAVTATVT 741
>SB_39796| Best HMM Match : VWA (HMM E-Value=0)
Length = 2119
Score = 27.9 bits (59), Expect = 5.3
Identities = 21/64 (32%), Positives = 29/64 (45%), Gaps = 2/64 (3%)
Frame = +2
Query: 245 NSCRPTLTPSRFTTTLSLPLRGLRYPATVTCLSIA--RSTATPRALSMPTTTLALSIITG 418
N+ TLT + T S + P TVT ++A ST+ A S TL + IT
Sbjct: 1818 NTRNATLTLTHHKTETSTAVAMTTVPHTVTTTAVALVNSTSVVMATSTAVATLTSTHITT 1877
Query: 419 QSTT 430
Q+ T
Sbjct: 1878 QTNT 1881
>SB_34586| Best HMM Match : Drf_FH1 (HMM E-Value=0.088)
Length = 665
Score = 27.9 bits (59), Expect = 5.3
Identities = 19/73 (26%), Positives = 27/73 (36%), Gaps = 1/73 (1%)
Frame = +2
Query: 257 PTLTPSRFTTTLSLPLRGLRYPATVTCLSIARSTATPRALSMPTTTLA-LSIITGQSTTC 433
P T + TTT L + + +T P P TTLA + I ++T
Sbjct: 476 PVTTMAPDTTTSPATTAALETTMVPETTAASDTTVVPETTDAPATTLAPKTTIAPETTVA 535
Query: 434 QDACDVELIPSTP 472
Q+ D I P
Sbjct: 536 QETTDAPAITMAP 548
>SB_23337| Best HMM Match : Ank (HMM E-Value=5.1e-07)
Length = 213
Score = 27.9 bits (59), Expect = 5.3
Identities = 12/25 (48%), Positives = 17/25 (68%)
Frame = +3
Query: 210 KVQANTPQRFSRTPVDLPLLQVDLR 284
KV AN P +F RTP+ +L+ D+R
Sbjct: 140 KVDANLPGQFGRTPLHNAVLKGDMR 164
>SB_33346| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1074
Score = 27.5 bits (58), Expect = 6.9
Identities = 14/49 (28%), Positives = 28/49 (57%)
Frame = +2
Query: 284 TTLSLPLRGLRYPATVTCLSIARSTATPRALSMPTTTLALSIITGQSTT 430
T+ ++P+ PAT ++A STAT +++ + + ++ +T STT
Sbjct: 282 TSTTVPVSSHVTPATGCNTTMATSTATVQSIDTEQSPIVITSVTPPSTT 330
>SB_22964| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1506
Score = 27.5 bits (58), Expect = 6.9
Identities = 16/56 (28%), Positives = 26/56 (46%)
Frame = +2
Query: 263 LTPSRFTTTLSLPLRGLRYPATVTCLSIARSTATPRALSMPTTTLALSIITGQSTT 430
+T + TTT++ + T+T I + T + TTT+ +IIT TT
Sbjct: 1062 ITITNITTTINTTINTTIITTTITTTIITTTITTTIITTTITTTITTTIITTTVTT 1117
>SB_20837| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1304
Score = 27.5 bits (58), Expect = 6.9
Identities = 21/47 (44%), Positives = 26/47 (55%), Gaps = 3/47 (6%)
Frame = +2
Query: 281 TTTLSLPLRGL--RYPATVTCLSIARSTATPRALSMPT-TTLALSII 412
TT SLP + PATV+ SIA S TP + S T TTL S++
Sbjct: 1169 TTIYSLPPTSMLNSTPATVSIDSIAPSPTTPPSSSSTTITTLNASVM 1215
>SB_46725| Best HMM Match : Extensin_2 (HMM E-Value=1.9)
Length = 496
Score = 27.5 bits (58), Expect = 6.9
Identities = 26/100 (26%), Positives = 41/100 (41%), Gaps = 2/100 (2%)
Frame = +3
Query: 198 QSRGKVQANTPQRFSRTP-VDLPLLQVDLR-RPYRCR*EDYGTRLPLPACPSRDLRLLPA 371
+S Q P++ P + LPL D + RP + +PLP PS LP+
Sbjct: 114 ESLSSKQGTPPRKALHPPKMQLPLTSSDPQTRPAMPLPSPSRSEMPLPPTPSSSSESLPS 173
Query: 372 PYLCPQLPSLSRLLQANLPRAKTRATWS*SLRRPQGMAGP 491
P P SR L ++ + ++ S + RP+ P
Sbjct: 174 GTKSPTKPLRSR-SSDELVKSNSESSKSNPVPRPRNRPPP 212
>SB_31811| Best HMM Match : Keratin_B2 (HMM E-Value=0.029)
Length = 138
Score = 27.5 bits (58), Expect = 6.9
Identities = 18/47 (38%), Positives = 25/47 (53%), Gaps = 4/47 (8%)
Frame = +2
Query: 248 SCRPTLTPSRFTTTLSLPLRGLRYPATVTC--LSIAR--STATPRAL 376
SCRP ++ PL +RY ++ TC L +AR S+AT R L
Sbjct: 61 SCRPLHVVRYMSSATCRPLHVVRYMSSATCRPLHVARFMSSATCRTL 107
>SB_12439| Best HMM Match : Transthyretin (HMM E-Value=7.7)
Length = 219
Score = 27.1 bits (57), Expect = 9.2
Identities = 16/51 (31%), Positives = 26/51 (50%), Gaps = 2/51 (3%)
Frame = +2
Query: 353 STATPRALSMPTTTLALSIITGQSTTC--QDACDVELIPSTPTRHGRTIST 499
+T T + + TTT + + T +S T Q+ + +P RH R+IST
Sbjct: 91 TTTTNTSPTAATTTASSPVTTMESITKGPQETSTLTAVPKNSIRHRRSIST 141
>SB_40486| Best HMM Match : C2 (HMM E-Value=2.9e-05)
Length = 698
Score = 27.1 bits (57), Expect = 9.2
Identities = 16/47 (34%), Positives = 27/47 (57%), Gaps = 1/47 (2%)
Frame = +3
Query: 165 LRAFSKRFGRHQSRG-KVQANTPQRFSRTPVDLPLLQVDLRRPYRCR 302
L+ +SKRFGR +RG +V+ +R+ + L+ VD+ +CR
Sbjct: 118 LQRYSKRFGRADTRGIRVKNMLHGTGTRSIIRYTLMYVDVLVSAQCR 164
>SB_33568| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1555
Score = 27.1 bits (57), Expect = 9.2
Identities = 14/42 (33%), Positives = 18/42 (42%), Gaps = 1/42 (2%)
Frame = +1
Query: 367 PRPIYAHNYPRSLDYYRPIYHVPRR-VRRGVDPFDAHKAWQD 489
P P N SL +P+YH P + GV P D + D
Sbjct: 131 PSPAPIQNLTSSLTASQPVYHTPMQGGSNGVTPVDTYAILDD 172
>SB_32754| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 5659
Score = 27.1 bits (57), Expect = 9.2
Identities = 15/39 (38%), Positives = 22/39 (56%)
Frame = +2
Query: 353 STATPRALSMPTTTLALSIITGQSTTCQDACDVELIPST 469
+TATP + P TTLA + I TT +A + ++P T
Sbjct: 889 ATATPELTAGPATTLAPTTIGALETT--EAPEFTMVPET 925
>SB_24809| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 780
Score = 27.1 bits (57), Expect = 9.2
Identities = 15/62 (24%), Positives = 32/62 (51%)
Frame = +2
Query: 245 NSCRPTLTPSRFTTTLSLPLRGLRYPATVTCLSIARSTATPRALSMPTTTLALSIITGQS 424
++ P+ T + +T + LP+ + +++ STA P ++M T+T S + Q+
Sbjct: 224 STAMPSPTTRQTSTAIPLPMSRQISAVITSPMAMQTSTAIPSPMAMQTSTAIPSPMAMQT 283
Query: 425 TT 430
+T
Sbjct: 284 ST 285
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,617,377
Number of Sequences: 59808
Number of extensions: 390330
Number of successful extensions: 1589
Number of sequences better than 10.0: 23
Number of HSP's better than 10.0 without gapping: 1339
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1563
length of database: 16,821,457
effective HSP length: 77
effective length of database: 12,216,241
effective search space used: 1148326654
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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