Bombyx BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= epV30410
         (516 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_Q8XN19 Cluster: Two-component sensor histidine kinase; ...    34   1.7  
UniRef50_Q8GAP9 Cluster: BarK; n=4; Bacteria|Rep: BarK - Lyngbya...    34   2.2  
UniRef50_Q4YI40 Cluster: BIR protein, putative; n=3; Plasmodium ...    34   2.2  
UniRef50_Q55DK9 Cluster: Putative uncharacterized protein; n=1; ...    33   2.9  
UniRef50_O67578 Cluster: Flagellar hook associated protein FlgK;...    33   3.9  
UniRef50_Q11WQ6 Cluster: Polysaccharide export outer membrane pr...    32   8.9  

>UniRef50_Q8XN19 Cluster: Two-component sensor histidine kinase;
           n=3; Clostridium perfringens|Rep: Two-component sensor
           histidine kinase - Clostridium perfringens
          Length = 431

 Score = 34.3 bits (75), Expect = 1.7
 Identities = 22/77 (28%), Positives = 38/77 (49%), Gaps = 6/77 (7%)
 Frame = -3

Query: 319 LLDRFFSSVLRFLGHSNLF*CRFKY*IKPRVYLLITLN------NYNEQEDEFTTILTSK 158
           +++ F+   + F+G S+ F    K  +K RV+  I LN      NY    +E +    + 
Sbjct: 6   VIELFYVIYISFIGISSFFYLDKKIDLKKRVFTTIILNFFLLLINYIFYINELSCFFEAL 65

Query: 157 ILILYLIFFCKKNTERI 107
           I+ +Y ++  KKNT  I
Sbjct: 66  IIYIYYVYLYKKNTTSI 82


>UniRef50_Q8GAP9 Cluster: BarK; n=4; Bacteria|Rep: BarK - Lyngbya
           majuscula
          Length = 353

 Score = 33.9 bits (74), Expect = 2.2
 Identities = 18/47 (38%), Positives = 24/47 (51%), Gaps = 2/47 (4%)
 Frame = -2

Query: 467 ICMYPNTIQMKFYIF--KPNLQNLLESYDKKIRGTKFMSQTKEYFSH 333
           + +YP+TI     IF  +PNL  L+ SYD       F+SQ K    H
Sbjct: 93  VAIYPDTIGQVVKIFNNEPNLTALIGSYDDSPGAANFLSQYKNLLHH 139


>UniRef50_Q4YI40 Cluster: BIR protein, putative; n=3; Plasmodium
           (Vinckeia)|Rep: BIR protein, putative - Plasmodium
           berghei
          Length = 249

 Score = 33.9 bits (74), Expect = 2.2
 Identities = 18/54 (33%), Positives = 29/54 (53%), Gaps = 2/54 (3%)
 Frame = -3

Query: 421 NQIYKIY*NHTTRKFGERNSCLKLKSTSVTLCIYLLDRFF--SSVLRFLGHSNL 266
           NQ YKI  N+  +K+    +C+         C+YLLD FF  S++ + +  SN+
Sbjct: 19  NQNYKIENNNDFKKYCSNQNCVNAIEKVNAGCLYLLDAFFKDSNLFKSVAKSNI 72


>UniRef50_Q55DK9 Cluster: Putative uncharacterized protein; n=1;
           Dictyostelium discoideum AX4|Rep: Putative
           uncharacterized protein - Dictyostelium discoideum AX4
          Length = 387

 Score = 33.5 bits (73), Expect = 2.9
 Identities = 28/105 (26%), Positives = 54/105 (51%), Gaps = 7/105 (6%)
 Frame = -1

Query: 474 FDHLYVPKYYPNEVLYF*TKFTKFIRIIRQENSGNE-------IHVSN*RVLQSHYVFIY 316
           F  L+VP +YPNE+ Y  +K     +++ + N  NE       IH+ N  ++ +  V ++
Sbjct: 48  FGDLFVP-FYPNEIRYCISKEDFLEKVVNKANEYNEPSNKYKIIHIVN--IIMA--VLLH 102

Query: 315 *IDFFRQF*DFWDIAIYFNVVLNTKLNLVYIY*LH*ITTTNRRMN 181
            I+ F  F    D+A +F V++ T L ++  + ++   T + + N
Sbjct: 103 AINLFFLFYFKADVAYFFIVIIPTFLFILSTWVINLFQTKSTKKN 147


>UniRef50_O67578 Cluster: Flagellar hook associated protein FlgK;
           n=1; Aquifex aeolicus|Rep: Flagellar hook associated
           protein FlgK - Aquifex aeolicus
          Length = 426

 Score = 33.1 bits (72), Expect = 3.9
 Identities = 18/31 (58%), Positives = 20/31 (64%)
 Frame = +1

Query: 256 DIKINCYVPKILELTKKIYLINKYIM*LKYS 348
           D  IN YV K+ EL KKIY INK I   KY+
Sbjct: 153 DYTINDYVRKVNELVKKIYKINKEIF-FKYA 182


>UniRef50_Q11WQ6 Cluster: Polysaccharide export outer membrane
           protein; n=1; Cytophaga hutchinsonii ATCC 33406|Rep:
           Polysaccharide export outer membrane protein - Cytophaga
           hutchinsonii (strain ATCC 33406 / NCIMB 9469)
          Length = 250

 Score = 31.9 bits (69), Expect = 8.9
 Identities = 13/36 (36%), Positives = 23/36 (63%)
 Frame = -3

Query: 268 LF*CRFKY*IKPRVYLLITLNNYNEQEDEFTTILTS 161
           L+  RF Y I+PR  L +++ +YN++  +F  + TS
Sbjct: 40  LYQMRFAYKIQPRDVLFVSITSYNQKATDFFNVKTS 75


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 433,164,883
Number of Sequences: 1657284
Number of extensions: 7905401
Number of successful extensions: 16269
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 15815
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 16266
length of database: 575,637,011
effective HSP length: 95
effective length of database: 418,195,031
effective search space used: 31782822356
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)