Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= epV30410
         (516 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292361-1|CAL23173.2|  373|Tribolium castaneum gustatory recept...    23   1.6  
AM292367-1|CAL23179.2| 1451|Tribolium castaneum gustatory recept...    22   2.8  
AM292336-1|CAL23148.2|  455|Tribolium castaneum gustatory recept...    22   3.7  
AY052625-1|AAL15473.1|  135|Tribolium castaneum tryptophan oxyge...    21   6.5  
AY052395-1|AAL15469.1|   76|Tribolium castaneum tryptophan oxyge...    21   6.5  
AY052392-1|AAL15466.1|  388|Tribolium castaneum tryptophan oxyge...    21   6.5  
AY052390-1|AAL15464.1|  388|Tribolium castaneum tryptophan oxyge...    21   6.5  
S73225-1|AAB30811.1|  327|Tribolium castaneum protein ( Triboliu...    21   8.6  
DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 pro...    21   8.6  

>AM292361-1|CAL23173.2|  373|Tribolium castaneum gustatory receptor
           candidate 40 protein.
          Length = 373

 Score = 23.0 bits (47), Expect = 1.6
 Identities = 7/30 (23%), Positives = 15/30 (50%)
 Frame = -2

Query: 494 RYMPFGILIICMYPNTIQMKFYIFKPNLQN 405
           RY  FG++ + +  +   M  Y++    +N
Sbjct: 145 RYSAFGMIFVALLEHCFSMLNYVYSSKCEN 174


>AM292367-1|CAL23179.2| 1451|Tribolium castaneum gustatory receptor
           candidate 46 protein.
          Length = 1451

 Score = 22.2 bits (45), Expect = 2.8
 Identities = 9/29 (31%), Positives = 18/29 (62%), Gaps = 1/29 (3%)
 Frame = -3

Query: 211 LNNYNEQEDEFTTILTSKILILYLIF-FC 128
           ++NY +Q+ +   I+ S  +  YL+F +C
Sbjct: 480 VSNYTKQQSKIHLIVRSVFVTTYLMFDYC 508


>AM292336-1|CAL23148.2|  455|Tribolium castaneum gustatory receptor
           candidate 15 protein.
          Length = 455

 Score = 21.8 bits (44), Expect = 3.7
 Identities = 8/23 (34%), Positives = 14/23 (60%)
 Frame = -2

Query: 410 QNLLESYDKKIRGTKFMSQTKEY 342
           +N+ E YD+  R T+F+ +   Y
Sbjct: 337 RNIREDYDRLARLTQFLDKELSY 359


>AY052625-1|AAL15473.1|  135|Tribolium castaneum tryptophan
           oxygenase protein.
          Length = 135

 Score = 21.0 bits (42), Expect = 6.5
 Identities = 8/13 (61%), Positives = 9/13 (69%)
 Frame = +3

Query: 414 IWFKNIKLHLDSI 452
           +WFK I   LDSI
Sbjct: 3   LWFKQIIYELDSI 15


>AY052395-1|AAL15469.1|   76|Tribolium castaneum tryptophan
           oxygenase protein.
          Length = 76

 Score = 21.0 bits (42), Expect = 6.5
 Identities = 8/13 (61%), Positives = 9/13 (69%)
 Frame = +3

Query: 414 IWFKNIKLHLDSI 452
           +WFK I   LDSI
Sbjct: 63  LWFKQIIYELDSI 75


>AY052392-1|AAL15466.1|  388|Tribolium castaneum tryptophan
           oxygenase protein.
          Length = 388

 Score = 21.0 bits (42), Expect = 6.5
 Identities = 8/13 (61%), Positives = 9/13 (69%)
 Frame = +3

Query: 414 IWFKNIKLHLDSI 452
           +WFK I   LDSI
Sbjct: 63  LWFKQIIYELDSI 75


>AY052390-1|AAL15464.1|  388|Tribolium castaneum tryptophan
           oxygenase protein.
          Length = 388

 Score = 21.0 bits (42), Expect = 6.5
 Identities = 8/13 (61%), Positives = 9/13 (69%)
 Frame = +3

Query: 414 IWFKNIKLHLDSI 452
           +WFK I   LDSI
Sbjct: 63  LWFKQIIYELDSI 75


>S73225-1|AAB30811.1|  327|Tribolium castaneum protein ( Tribolium
           castaneum homeodomainprotein mRNA, complete cds. ).
          Length = 327

 Score = 20.6 bits (41), Expect = 8.6
 Identities = 9/16 (56%), Positives = 12/16 (75%)
 Frame = +3

Query: 420 FKNIKLHLDSIWVHTN 467
           FKNI+ HL++I   TN
Sbjct: 42  FKNIESHLNAISQITN 57


>DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 protein.
          Length = 2700

 Score = 20.6 bits (41), Expect = 8.6
 Identities = 7/20 (35%), Positives = 13/20 (65%)
 Frame = +1

Query: 454  GYIQMIKIPNGMYL*QMYCD 513
            G +Q+   PNG++  + +CD
Sbjct: 2258 GQLQLQVCPNGLFWNKDHCD 2277


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 114,990
Number of Sequences: 336
Number of extensions: 2445
Number of successful extensions: 9
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 9
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 9
length of database: 122,585
effective HSP length: 53
effective length of database: 104,777
effective search space used: 12363686
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)